Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002242A_C01 KCC002242A_c01
(540 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_288860.1| hypothetical protein XP_288860 [Mus musculus] 42 0.007
gb|AAM08531.1|AC079935_3 Hypothetical protein [Oryza sativa] gi|... 40 0.020
gb|AAK68064.1|AF375824_1 mating type protein Mat3p [Chlamydomona... 37 0.13
ref|NP_641446.1| DNA polymerase III tau and gamma subunits [Xant... 37 0.17
gb|AAL73558.1|AC079632_2 Unknown protein [Oryza sativa] gi|19920... 37 0.22
>ref|XP_288860.1| hypothetical protein XP_288860 [Mus musculus]
Length = 296
Score = 41.6 bits (96), Expect = 0.007
Identities = 40/137 (29%), Positives = 57/137 (41%), Gaps = 9/137 (6%)
Frame = +2
Query: 95 AAPTAQPTSRQLASAMASELLRAASYPG-VIGVEFLDCELPAESEAQAASTSGAPVEPKD 271
AA +A + ASA + A++ G D + A SEA + + V K
Sbjct: 143 AAASATHSKTAAASAAHGKTAAASAVHGKTAAASEADGKTAAASEADGKTAGASAVHGKT 202
Query: 272 AAAQRSHGGVGLGDLTYAHGGLSARALRPG--ASRFTCGGQVLMATSGNGVSALASAA-- 439
A A +HG AHG +A + G A+ G+ A+ NG +A ASAA
Sbjct: 203 AGASAAHGKTAAASA--AHGKTAAASAAHGKTAAASEADGKTAAASEANGKTAAASAAHK 260
Query: 440 ----PETWVPTMTCAPR 478
+T T+ CAPR
Sbjct: 261 CSPSSDTKQHTLFCAPR 277
>gb|AAM08531.1|AC079935_3 Hypothetical protein [Oryza sativa]
gi|19920232|gb|AAM08664.1|AC113338_20 Hypothetical
protein [Oryza sativa (japonica cultivar-group)]
gi|31431676|gb|AAP53420.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 492
Score = 40.0 bits (92), Expect = 0.020
Identities = 52/167 (31%), Positives = 65/167 (38%), Gaps = 5/167 (2%)
Frame = -2
Query: 512 PPRS-RAGRSRWAWARRSWLVP---RFLAQRLRALKHRFRMLPLIPGPHK*TWMPRGAER 345
PPR R R+R + A RS P R L AL HR R+ P + R
Sbjct: 258 PPRLLRPRRARLSVAPRSRAAPAAARLLRSTCAALPHRRRLASSTPASRLAATLATLLPR 317
Query: 344 VLKVLHGHT*GRQAQHHRATAGQPHP*VLQVLLKCSRPALRSPRAARSPRTQLR*-PRDS 168
+L+ H A P P +L+ S P PR R R +L PR
Sbjct: 318 LLR----------CPHRACPASPPPPRLLRPATLASPP----PRLLRPRRARLSVAPRSR 363
Query: 167 WPPAEAQKPWLMLVVLTSAAL*ERRRLGAPRPHCRTLFVVLCLLKRL 27
PA A+ L+ T AAL RRRL + P R + LL RL
Sbjct: 364 AAPAAAR-----LLRSTCAALPHRRRLASSTPASRLAATLATLLPRL 405
Score = 40.0 bits (92), Expect = 0.020
Identities = 52/167 (31%), Positives = 65/167 (38%), Gaps = 5/167 (2%)
Frame = -2
Query: 512 PPRS-RAGRSRWAWARRSWLVP---RFLAQRLRALKHRFRMLPLIPGPHK*TWMPRGAER 345
PPR R R+R + A RS P R L AL HR R+ P + R
Sbjct: 171 PPRLLRPRRARLSVAPRSRAAPAAARLLRSTCAALPHRRRLASSTPASRLAATLATLLPR 230
Query: 344 VLKVLHGHT*GRQAQHHRATAGQPHP*VLQVLLKCSRPALRSPRAARSPRTQLR*-PRDS 168
+L+ H A P P +L+ S P PR R R +L PR
Sbjct: 231 LLR----------CPHRACPASPPPPRLLRPATLASPP----PRLLRPRRARLSVAPRSR 276
Query: 167 WPPAEAQKPWLMLVVLTSAAL*ERRRLGAPRPHCRTLFVVLCLLKRL 27
PA A+ L+ T AAL RRRL + P R + LL RL
Sbjct: 277 AAPAAAR-----LLRSTCAALPHRRRLASSTPASRLAATLATLLPRL 318
Score = 32.7 bits (73), Expect = 3.2
Identities = 32/92 (34%), Positives = 39/92 (41%), Gaps = 1/92 (1%)
Frame = -2
Query: 299 HHRATAGQPHP*VLQ-VLLKCSRPALRSPRAARSPRTQLR*PRDSWPPAEAQKPWLMLVV 123
H A P P +L+ L P+L PR AR PR PA A+ L+
Sbjct: 62 HRACLASPPPPRLLRPATLASPPPSLLRPRRARLSVA----PRSRAAPAAAR-----LLR 112
Query: 122 LTSAAL*ERRRLGAPRPHCRTLFVVLCLLKRL 27
T AAL RRRL + P R + LL RL
Sbjct: 113 STCAALPHRRRLASSTPASRLAATLATLLPRL 144
>gb|AAK68064.1|AF375824_1 mating type protein Mat3p [Chlamydomonas reinhardtii]
Length = 1209
Score = 37.4 bits (85), Expect = 0.13
Identities = 31/114 (27%), Positives = 42/114 (36%), Gaps = 4/114 (3%)
Frame = +2
Query: 206 ELPAESEAQAASTSGAPVEPKDAAAQRSHGGVGLGDLTYAHGGLSARALRPGASRF---- 373
E A + AAS + + + A S G G A GG +PGAS
Sbjct: 646 EAAATAACSAASGDDSQHDGAGSRAGLSSSSGGAGAAAAAEGGAGGGTEQPGASSSHNTE 705
Query: 374 TCGGQVLMATSGNGVSALASAAPETWVPTMTCAPRPSDSCLPASAAELREPVTS 535
GG M T+ G A++AP + P P + PA+ A P S
Sbjct: 706 QSGGAPPMETAEGGAPGAATSAPPSTTSAAPAEPAPPAAASPAAPAASHAPPPS 759
>ref|NP_641446.1| DNA polymerase III tau and gamma subunits [Xanthomonas axonopodis
pv. citri str. 306] gi|21107246|gb|AAM35982.1| DNA
polymerase III tau and gamma subunits [Xanthomonas
axonopodis pv. citri str. 306]
Length = 689
Score = 37.0 bits (84), Expect = 0.17
Identities = 19/55 (34%), Positives = 27/55 (48%)
Frame = +2
Query: 374 TCGGQVLMATSGNGVSALASAAPETWVPTMTCAPRPSDSCLPASAAELREPVTST 538
T GG A +G ++A +AAP T P + AP +P +AAE P + T
Sbjct: 374 TAGGGARSAAAGGQLAAPVAAAPVTSAPAVVAAPTAVTDTMPVAAAEASLPASGT 428
>gb|AAL73558.1|AC079632_2 Unknown protein [Oryza sativa]
gi|19920209|gb|AAM08641.1|AC108883_14 Hypothetical
protein [Oryza sativa] gi|31429730|gb|AAP51739.1|
unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 204
Score = 36.6 bits (83), Expect = 0.22
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = -1
Query: 312 SPSPTPPCDRWAAASLGSTGAPEVLAACASLSAGSSQSKNSTPMT 178
SPSPTPP AA+S + +P+ A A+ SA S N TP+T
Sbjct: 58 SPSPTPPS---AASSASVSASPDTPPAAAASSAALDSSANGTPIT 99
