Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002237A_C01 KCC002237A_c01
(432 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAA46060.1| latency-related open reading frame 1; putative 40 0.006
gb|AAP03363.1| hypothetical protein [Oryza sativa (japonica cult... 37 0.048
gb|AAH40797.1| Topoisomerase 1-binding RING finger [Mus musculus] 37 0.082
ref|XP_223524.2| similar to Zinc finger protein 151 (Zinc finger... 36 0.11
emb|CAC41624.1| putative DNA-binding protein [Bifidobacterium an... 36 0.14
>gb|AAA46060.1| latency-related open reading frame 1; putative
Length = 344
Score = 40.4 bits (93), Expect = 0.006
Identities = 33/100 (33%), Positives = 43/100 (43%)
Frame = +1
Query: 130 GEHSRADSARTPRHGCGRRGGWAPTSTSHWLPAPFCARLCRTSLKPHQMAAVAALPPPPA 309
G +R++S R C R G +P+S + P P +SL Q A A P PA
Sbjct: 140 GVGARSNSVLLLRRACTRGGPASPSSLARRSPRP-------SSLPAPQPAVSPAATPKPA 192
Query: 310 ALPSDGLLLELLGGPPSPRTCVASDACLSLGSQGSPSSPR 429
LPS LG R C A A + G++GS PR
Sbjct: 193 PLPSS------LGSGLHARACAAGAARGAAGNRGSRLPPR 226
>gb|AAP03363.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 464
Score = 37.4 bits (85), Expect = 0.048
Identities = 44/130 (33%), Positives = 49/130 (36%), Gaps = 12/130 (9%)
Frame = +1
Query: 79 SSRSSLEHACSRSSLIWGEHSRADSARTPRHGCGRRGGWA------PTSTSHWLPAPFCA 240
S + E A S G R R R G RGG A P SH LPA +
Sbjct: 98 SGGAGREAAARGSRRRHGARGRRRRWRRRRGGRAARGGDARLLPSSPVVPSH-LPAVVPS 156
Query: 241 RLCRTSLKPHQMAAVAALP----PPPAALPSDGLLLELLGGPPSPRTCV--ASDACLSLG 402
CR AA+A P PPPA+ P PP PR + A SLG
Sbjct: 157 LPCRRPSSAAPAAALARRPAVPSPPPASRP-----------PPLPRLALPPVDVATTSLG 205
Query: 403 SQGSPSSPRS 432
S PSSP S
Sbjct: 206 SATPPSSPAS 215
>gb|AAH40797.1| Topoisomerase 1-binding RING finger [Mus musculus]
Length = 1033
Score = 36.6 bits (83), Expect = 0.082
Identities = 28/91 (30%), Positives = 39/91 (42%)
Frame = -1
Query: 318 RQRRGGRRQSGYSRHLVRFEACPAQPRAERRWQPMGGRSRSPPAPSSAAVPRCPSAIRTT 139
R R+GGR +S SR R P R + +P RSRS + S + RT
Sbjct: 590 RHRKGGRSRSSDSRSQSRSGHDPRNHRKHGKKRPRNKRSRSRESSSRPRARKDKKRSRTR 649
Query: 138 MLAPDKRTAGASVLEARAARERSRSRMFQKR 46
+ +R+ S+ +R RSRS KR
Sbjct: 650 DSSWSRRSQTLSLSSGSTSRSRSRSSDHGKR 680
>ref|XP_223524.2| similar to Zinc finger protein 151 (Zinc finger protein 100)
(Zfp-100) (Polyomavirus late initiator promoter binding
protein) (LP-1) (Zinc finger protein Z13) [Rattus
norvegicus]
Length = 903
Score = 36.2 bits (82), Expect = 0.11
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Frame = -1
Query: 285 YSRHLVRFEACPA------QPRAERRWQPMGGRSRSPPAPSSAAVPRCPSAIRTTMLAPD 124
YS+ + ACP+ QP R + PP A VP P + +T++AP
Sbjct: 362 YSKQYYKQTACPSPVPATEQPPTPRASTDLAAADSQPPVEGRAGVPESPEHLASTVVAPP 421
Query: 123 KRTAG 109
R++G
Sbjct: 422 VRSSG 426
>emb|CAC41624.1| putative DNA-binding protein [Bifidobacterium animalis]
Length = 299
Score = 35.8 bits (81), Expect = 0.14
Identities = 35/102 (34%), Positives = 45/102 (43%), Gaps = 3/102 (2%)
Frame = -1
Query: 327 PVRRQRRGGRRQSGYSRHLVRFEACPA-QPRAERRWQPMG--GRSRSPPAPSSAAVPRCP 157
P R+ R R Q R +R +A PA Q R RR +P G R P P A PR
Sbjct: 135 PATRRHRQARCQG---RQALRLQARPADQRRIPRRTRPCQTHGPVRHPGQPRPHARPRRL 191
Query: 156 SAIRTTMLAPDKRTAGASVLEARAARERSRSRMFQKRPGSML 31
T + P +R A +ARA R R+ Q+ PG+ L
Sbjct: 192 PKGHTRL--PVRRQATRRTHDARADRRPDRTGALQRLPGTRL 231
