Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002234A_C01 KCC002234A_c01
(427 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_199525.2| GATA zinc finger protein [Arabidopsis thaliana] 77 7e-14
ref|NP_193491.2| GATA zinc finger protein [Arabidopsis thaliana]... 72 2e-12
dbj|BAA98109.1| gene_id:K14A3.9~pir||D71445~similar to unknown p... 60 9e-09
ref|NP_190103.1| GATA zinc finger protein [Arabidopsis thaliana]... 54 5e-07
gb|AAK54294.1|AC034258_12 putative transcription factor [Oryza s... 51 3e-06
>ref|NP_199525.2| GATA zinc finger protein [Arabidopsis thaliana]
Length = 470
Score = 76.6 bits (187), Expect = 7e-14
Identities = 37/74 (50%), Positives = 43/74 (58%)
Frame = +3
Query: 189 GPCCHCGTVATPCWRKGPCDKPVLCNACGSRYLVKGSLAGYFPGARRASAGTRSEAPQIQ 368
GPC HCG +TP WR GP +KPVLCNACGSR+ KGSL Y P RA G +E +
Sbjct: 5 GPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGSLVNYTPLHARAE-GDETEIEDHR 63
Query: 369 ATVVSAAGKSAARK 410
V G S +K
Sbjct: 64 TQTVMIKGMSLNKK 77
Score = 32.3 bits (72), Expect = 1.6
Identities = 13/31 (41%), Positives = 18/31 (57%)
Frame = -1
Query: 244 QGPFRQQGVATVPQWQQGPPVEPRIVSGYGS 152
QGP GV + P W+ GPP +P + + GS
Sbjct: 4 QGPCYHCGVTSTPLWRNGPPEKPVLCNACGS 34
>ref|NP_193491.2| GATA zinc finger protein [Arabidopsis thaliana]
gi|17064972|gb|AAL32640.1| Unknown protein [Arabidopsis
thaliana]
Length = 510
Score = 72.0 bits (175), Expect = 2e-12
Identities = 31/60 (51%), Positives = 36/60 (59%)
Frame = +3
Query: 189 GPCCHCGTVATPCWRKGPCDKPVLCNACGSRYLVKGSLAGYFPGARRASAGTRSEAPQIQ 368
GPC HCG TP WR GP +KPVLCNACGSR+ KG+L Y P RA + + Q
Sbjct: 5 GPCYHCGVTNTPLWRNGPPEKPVLCNACGSRWRTKGTLVNYTPLHARADGDENDDHHRFQ 64
Score = 32.0 bits (71), Expect = 2.0
Identities = 13/31 (41%), Positives = 17/31 (53%)
Frame = -1
Query: 244 QGPFRQQGVATVPQWQQGPPVEPRIVSGYGS 152
QGP GV P W+ GPP +P + + GS
Sbjct: 4 QGPCYHCGVTNTPLWRNGPPEKPVLCNACGS 34
>dbj|BAA98109.1| gene_id:K14A3.9~pir||D71445~similar to unknown protein [Arabidopsis
thaliana]
Length = 461
Score = 59.7 bits (143), Expect = 9e-09
Identities = 31/64 (48%), Positives = 36/64 (55%)
Frame = +3
Query: 219 TPCWRKGPCDKPVLCNACGSRYLVKGSLAGYFPGARRASAGTRSEAPQIQATVVSAAGKS 398
TP WR GP +KPVLCNACGSR+ KGSL Y P RA G +E + V G S
Sbjct: 6 TPLWRNGPPEKPVLCNACGSRWRTKGSLVNYTPLHARAE-GDETEIEDHRTQTVMIKGMS 64
Query: 399 AARK 410
+K
Sbjct: 65 LNKK 68
>ref|NP_190103.1| GATA zinc finger protein [Arabidopsis thaliana]
gi|11358003|pir||T47457 hypothetical protein T14D3.110 -
Arabidopsis thaliana gi|6911855|emb|CAB72155.1| putative
protein [Arabidopsis thaliana]
Length = 204
Score = 53.9 bits (128), Expect = 5e-07
Identities = 25/53 (47%), Positives = 28/53 (52%)
Frame = +3
Query: 165 DTMRGSTGGPCCHCGTVATPCWRKGPCDKPVLCNACGSRYLVKGSLAGYFPGA 323
D+ G T C HCGT TP WR+GP LCNACG RY L Y P +
Sbjct: 107 DSKFGITDKSCSHCGTRKTPLWREGPRGAGTLCNACGMRYRTGRLLPEYRPAS 159
>gb|AAK54294.1|AC034258_12 putative transcription factor [Oryza sativa (japonica
cultivar-group)] gi|31432490|gb|AAP54112.1| putative
transcription factor [Oryza sativa (japonica
cultivar-group)]
Length = 528
Score = 51.2 bits (121), Expect = 3e-06
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +3
Query: 186 GGPCCHCGTVATPCWRKGPCDKPVLCNACGSRY 284
G C HCGT TP WR GP + LCNACG++Y
Sbjct: 234 GRECAHCGTTKTPAWRLGPDSRRKLCNACGNKY 266
Score = 47.0 bits (110), Expect = 6e-05
Identities = 17/30 (56%), Positives = 19/30 (62%)
Frame = +3
Query: 195 CCHCGTVATPCWRKGPCDKPVLCNACGSRY 284
C HCGT TP W GP + LCNACG +Y
Sbjct: 455 CTHCGTTKTPAWLSGPDSRGKLCNACGKQY 484
Score = 46.6 bits (109), Expect = 8e-05
Identities = 20/39 (51%), Positives = 21/39 (53%)
Frame = +3
Query: 168 TMRGSTGGPCCHCGTVATPCWRKGPCDKPVLCNACGSRY 284
T + G C HCGT TP WR GP LCNAC RY
Sbjct: 56 TAAAAKGLQCRHCGTTETPQWRHGPEGHRTLCNACSMRY 94
