>KCC002230A_C01 KCC002230A_c01
aaagcgcttattcatattcaactactgcacgtttcatcGTCAACACTGAAGCACCAAGCG
ACGGCGTGACGAATTCAGGCCATCGAAGCTGGCGAAGCCCTCCACTGTCATTAAAATCTA
ATAGTCTCAGCACCAGCACTACCTACGCTACTGACTATTAACCAAAATGCCCCCCAAGAA
GGAGAAAGGAACGGGAGGCGGCGGGAAAAGGAAGAAATAGGTCCGCCTATCCTGGATGAA
CGAAGGACTGTGGGATCTAAGCCAAAATCTTCAGAAGCTGTCGGAGTTTTATAGTGGCGA
CATTAAGGAAACGAAGCTGAAGGAGGGCCAGGCGCCCCCTCCAAACATCACGCGGACACA
GGCTGGCATGTACATCTGGCAGCTGCTGTTCCCTAACAACAAGCAGGGCAAGCAGAAGCG
CGAGGAGTCCATCAAACTGGGCATCGTGGAGGTGTCGGTTAAGATCCTGGCGAGCGGCAA
GGCGCCCGACATGACGCC

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002230A_C01 KCC002230A_c01
         (498 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAC04036.1| unnamed protein product [Homo sapiens]                 36  0.30
ref|ZP_00052774.1| COG2352: Phosphoenolpyruvate carboxylase [Mag...    35  0.39
pir||S43073 hypothetical protein 7 - human herpesvirus 6 gi|4699...    35  0.51
ref|NP_064328.1| homeobox gene HB9 [Mus musculus] gi|5733509|gb|...    35  0.51
sp|P15265|MCS_MOUSE Sperm mitochondrial associated cysteine-rich...    34  0.86

>dbj|BAC04036.1| unnamed protein product [Homo sapiens]
          Length = 279

 Score = 35.8 bits (81), Expect = 0.30
 Identities = 19/41 (46%), Positives = 23/41 (55%), Gaps = 2/41 (4%)
 Frame = +3

Query: 354 GHRLACTSGSCCSLTTSRASRSARSPSNWA--SWRCRLRSW 470
           G R    +GSCC+ T S  SR+  + S WA  SWR  L SW
Sbjct: 11  GTRPTTGAGSCCAGTCSSTSRTLPAVSPWASSSWRAALWSW 51

>ref|ZP_00052774.1| COG2352: Phosphoenolpyruvate carboxylase [Magnetospirillum
           magnetotacticum]
          Length = 797

 Score = 35.4 bits (80), Expect = 0.39
 Identities = 34/126 (26%), Positives = 51/126 (39%), Gaps = 21/126 (16%)
 Frame = +3

Query: 171 PPRRRKEREAAGKGRNRSAYPG*TKDCGI*AKIFRSCRSFIVATLRKRS*RRAR------ 332
           P  RR  R   G       Y    KD G  A  +   ++ ++A   +++ RRA       
Sbjct: 579 PVVRRSTRWQGGVQEVMIGYSDSNKDGGFIASNWELYKAQVLAHRARQASRRAGSPSSTV 638

Query: 333 ----------RPLQTSRGHRLACTSGSCCSLTTSRASRS-----ARSPSNWASWRCRLRS 467
                     RP+  SR  R A ++G+  S + +R+SRS        P  W+ WR R  S
Sbjct: 639 AXVPSAGAACRPIAASRPSRRARSTGASASPSRARSSRSNMPTAVPPPIRWSCWRPRSSS 698

Query: 468 WRAARR 485
              +RR
Sbjct: 699 TPCSRR 704

>pir||S43073 hypothetical protein 7 - human herpesvirus 6
           gi|469959|emb|CAA52030.1| unnamed protein product [Human
           herpesvirus 6]
          Length = 99

 Score = 35.0 bits (79), Expect = 0.51
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3

Query: 378 GSCCSLTTSRASRSARSPSNWASWRCRLRSWRAA 479
           G C SL+  R   ++  P  W ++RCR RS RA+
Sbjct: 61  GFCVSLSRERTPHTSHGPRGWPAYRCRRRSLRAS 94

>ref|NP_064328.1| homeobox gene HB9 [Mus musculus]
           gi|5733509|gb|AAD49613.1|AF153046_1 homeodomain protein
           HB9 [Mus musculus]
          Length = 404

 Score = 35.0 bits (79), Expect = 0.51
 Identities = 23/51 (45%), Positives = 25/51 (48%)
 Frame = +1

Query: 307 GNEAEGGPGAPSKHHADTGWHVHLAAAVP*QQAGQAEARGVHQTGHRGGVG 459
           G  A GGPG P  HHA  G     AAA     AG   A G+H  G +GG G
Sbjct: 103 GGGAAGGPGTP-HHHAHPGAAAAAAAAAAAAAAG-GLALGLHPGGAQGGAG 151

>sp|P15265|MCS_MOUSE Sperm mitochondrial associated cysteine-rich protein
          Length = 143

 Score = 34.3 bits (77), Expect = 0.86
 Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
 Frame = -2

Query: 488 RAPCRSPGS*PTPPRCPV*WTPRASACPA-----CC*GTAAARCTCQPVSA*CLEGAPGP 324
           ++PC  P   P PP CP    P  + CP      CC      +C+C P    C      P
Sbjct: 43  KSPCCPPKPCPCPPPCP---CPCPATCPCPLKPPCC----PQKCSCCPKKCTCC--PQPP 93

Query: 323 PSASFP*CRHYKTPTASEDFGLDPTVLRSSR 231
           P  + P C   +  T S+      T+ + S+
Sbjct: 94  PCCAQPTCCSSENKTESDSDTSGQTLEKGSQ 124

EST assemble image

clone accession position 1 LCL057e07_r AV629370 1 382 2 HCL005g06_r AV639833 39 498

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