>KCC002215A_C01 KCC002215A_c01
ACTACAGCTAGGAATGGTCTTACATGTCATGACTTAGTTATCGGGGACGGAGGGGCATTC
AGCGCGCAGAAGCGGGCAAGAATGAAGTCCTCAGGCTTCGCCATAAAGTCTAAGAAGACT
CCTTTTCAGAAACATAAGGAAGCTGAGGAGGAGCGCAAAAAGAAAGCCGATGAGGAGGCA
GCACGTGTGTATGAGGAGTTCGTGGAATCGTTCTCCTCCGCGCCAGAGCCAAAGCGGGGC
GGTGGCTTTGTGAGGGGTGGCACGGTGCTACCTGGCAGCAAGCCCACTGATGCCCCGGCG
CCCGTGGGTCTGTCCAGCAAGAAGACTACCAAGTATGTGCCTTCC

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002215A_C01 KCC002215A_c01
         (345 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_568464.1| RNA recognition motif (RRM)-containing protein ...    86  2e-16
ref|NP_611535.1| CG9346-PA [Drosophila melanogaster] gi|7291222|...    40  0.006
gb|AAL39666.2| LD23810p [Drosophila melanogaster]                      40  0.006
dbj|BAA20790.1| KIAA0332 [Homo sapiens] gi|23336900|tpg|DAA00075...    38  0.042
gb|AAH06474.1|AAH06474 Unknown (protein for IMAGE:2820942) [Homo...    38  0.042

>ref|NP_568464.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
           thaliana] gi|13430600|gb|AAK25922.1|AF360212_1 unknown
           protein [Arabidopsis thaliana]
           gi|14532872|gb|AAK64118.1| unknown protein [Arabidopsis
           thaliana]
          Length = 946

 Score = 85.5 bits (210), Expect = 2e-16
 Identities = 47/90 (52%), Positives = 58/90 (64%), Gaps = 5/90 (5%)
 Frame = +1

Query: 91  SGFAIKSKKTPFQKHKEAEEERKKKADEEAARVYEEFVESFSSAPEPKRGGGFVRGGTVL 270
           S F+I  KKTPFQKH+E EE RKKKA++E AR+Y+EFVESF       +   FVRGGT+ 
Sbjct: 2   SSFSITRKKTPFQKHREEEEARKKKAEDETARLYQEFVESFQGDNATTK--TFVRGGTIN 59

Query: 271 PGSKPT-----DAPAPVGLSSKKTTKYVPS 345
           PG KP      +     G  SKK ++YVPS
Sbjct: 60  PGDKPKVDSEGEKSKDGGSVSKKGSRYVPS 89

>ref|NP_611535.1| CG9346-PA [Drosophila melanogaster] gi|7291222|gb|AAF46654.1|
           CG9346-PA [Drosophila melanogaster]
          Length = 957

 Score = 40.4 bits (93), Expect = 0.006
 Identities = 27/84 (32%), Positives = 42/84 (49%), Gaps = 2/84 (2%)
 Frame = +1

Query: 46  DGGAFSA--QKRARMKSSGFAIKSKKTPFQKHKEAEEERKKKADEEAARVYEEFVESFSS 219
           D  A SA  ++ +  K   F + +        KE E+++KK+    AA  ++EFVE+F  
Sbjct: 10  DSAAASATLKRISEKKLEAFTVGTFSKRQLSKKELEDQKKKEDAAAAAHAFKEFVETFQD 69

Query: 220 APEPKRGGGFVRGGTVLPGSKPTD 291
           AP P     +V+ GT   GS+  D
Sbjct: 70  APTPS-SKVWVKAGTYDAGSRRED 92

>gb|AAL39666.2| LD23810p [Drosophila melanogaster]
          Length = 958

 Score = 40.4 bits (93), Expect = 0.006
 Identities = 27/84 (32%), Positives = 42/84 (49%), Gaps = 2/84 (2%)
 Frame = +1

Query: 46  DGGAFSA--QKRARMKSSGFAIKSKKTPFQKHKEAEEERKKKADEEAARVYEEFVESFSS 219
           D  A SA  ++ +  K   F + +        KE E+++KK+    AA  ++EFVE+F  
Sbjct: 11  DSAAASATLKRISEKKLEAFTVGTFSKRQLSKKELEDQKKKEDAAAAAHAFKEFVETFQD 70

Query: 220 APEPKRGGGFVRGGTVLPGSKPTD 291
           AP P     +V+ GT   GS+  D
Sbjct: 71  APTPS-SKVWVKAGTYDAGSRRED 93

>dbj|BAA20790.1| KIAA0332 [Homo sapiens] gi|23336900|tpg|DAA00075.1| TPA:
           U2-associated SR140 protein [Homo sapiens]
          Length = 1028

 Score = 37.7 bits (86), Expect = 0.042
 Identities = 21/67 (31%), Positives = 37/67 (54%)
 Frame = +1

Query: 136 KEAEEERKKKADEEAARVYEEFVESFSSAPEPKRGGGFVRGGTVLPGSKPTDAPAPVGLS 315
           KE EE +KK+ ++ AA +YEEF+ +F  + +  +   FVRGG V    +  +     G  
Sbjct: 98  KEQEELKKKEDEKAAAEIYEEFLAAFEGS-DGNKVKTFVRGGVVNAAKEEHETDEKRGKI 156

Query: 316 SKKTTKY 336
            K ++++
Sbjct: 157 YKPSSRF 163

>gb|AAH06474.1|AAH06474 Unknown (protein for IMAGE:2820942) [Homo sapiens]
          Length = 1027

 Score = 37.7 bits (86), Expect = 0.042
 Identities = 21/67 (31%), Positives = 37/67 (54%)
 Frame = +1

Query: 136 KEAEEERKKKADEEAARVYEEFVESFSSAPEPKRGGGFVRGGTVLPGSKPTDAPAPVGLS 315
           KE EE +KK+ ++ AA +YEEF+ +F  + +  +   FVRGG V    +  +     G  
Sbjct: 98  KEQEELKKKEDEKAAAEIYEEFLAAFEGS-DGNKVKTFVRGGVVNAAKEEHETDEKRGKI 156

Query: 316 SKKTTKY 336
            K ++++
Sbjct: 157 YKPSSRF 163

EST assemble image

clone accession position 1 HCL004a06_r AV639736 1 191 2 MXL043d01_r BP095532 1 345

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