KCC002213A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002213A_C01 KCC002213A_c01
CGTCCTGGCAGCATGCATACAATCTCAAAAGCAGCGGTCTTCGCGAAGCGGCGGGTGAAC
TTCTGCGCTAGAAACTGCTCCCGCACAAAAGCTCGCGCTGCAGCGGTCAGGCATAACGTC
GTAGTTGGGTGGAAGGAACAGCTGAAGAATGCGTTGGACGGTGTCACTTCGCGTGGCACG
TTCGCAGTGACCGGCACTGTCGATGGGCCACTGCCTGAGATGCGAGTGCGAGGCGTGGGA
AACCTGGCACTCCCCATCGGTGCTAGACAAGCCAGAGACCTGGTCTTCGCGGGCCAGCCC
GCGCCCTACGGCAAGGGATCCAAAACGGTGATAGACCCGGCTGTGCGCAATGCTATTCAA
CTTGAAGCGCACCGTGTGCGCTTCTCAAAGGACTGGGATGAGACTCTCAGCCGTCTCACC
ATCGACGTCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002213A_C01 KCC002213A_c01
         (430 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_332104.1| predicted protein [Neurospora crassa] gi|289201...    67  6e-11
gb|AAL27282.1|AF355749_1 spore wall protein 2 precursor [Encepha...    37  0.082
ref|ZP_00005581.1| COG1305: Transglutaminase-like enzymes, putat...    30  0.090
pir||T46145 hypothetical protein T3A5.60 - Arabidopsis thaliana ...    35  0.31
ref|XP_327061.1| predicted protein [Neurospora crassa] gi|289253...    33  0.91

>ref|XP_332104.1| predicted protein [Neurospora crassa] gi|28920138|gb|EAA29519.1|
           predicted protein [Neurospora crassa]
          Length = 934

 Score = 67.0 bits (162), Expect = 6e-11
 Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
 Frame = +1

Query: 124 VGWKEQLKNALDGVTSRGTFAVTGTVDGPLPE-MRVRGVGNLALPIGARQARDLVFAGQP 300
           V  K+ L+ ALD V   G+FA    +    P+ + V GVG++A+P+   QAR L+   + 
Sbjct: 59  VSLKDDLRKALDNVKVAGSFASFRKLSRTPPDGLYVDGVGDVAMPLSETQARQLIAKARQ 118

Query: 301 APYGKGSKTVIDPAVRNAIQLEAHRVRFS 387
           APYG+GS+T++D +VRN  +++A +  F+
Sbjct: 119 APYGRGSETIVDTSVRNTWEIDAAQFSFN 147

>gb|AAL27282.1|AF355749_1 spore wall protein 2 precursor [Encephalitozoon intestinalis]
          Length = 1002

 Score = 36.6 bits (83), Expect = 0.082
 Identities = 34/124 (27%), Positives = 56/124 (44%)
 Frame = +1

Query: 58  NFCARNCSRTKARAAAVRHNVVVGWKEQLKNALDGVTSRGTFAVTGTVDGPLPEMRVRGV 237
           N  A   +   A ++A+   +    ++ + + L  V++     +   V+  L   +V  V
Sbjct: 186 NTAAELAAIDAAESSALTRAIQANAQKVISDLLTRVSAMCYLDIMSLVNSGLLASQVSSV 245

Query: 238 GNLALPIGARQARDLVFAGQPAPYGKGSKTVIDPAVRNAIQLEAHRVRFSKDWDETLSRL 417
            N   PI      DL FA Q A + K SKT+I  AV NA+Q   +R +F++ +    S L
Sbjct: 246 FNNIQPIITIAGNDL-FAKQMAVFQKLSKTLISTAVTNALQ--GNRAKFTRFYTTQTSNL 302

Query: 418 TIDV 429
              V
Sbjct: 303 QTSV 306

>ref|ZP_00005581.1| COG1305: Transglutaminase-like enzymes, putative cysteine proteases
           [Rhodobacter sphaeroides]
          Length = 479

 Score = 29.6 bits (65), Expect(2) = 0.090
 Identities = 18/41 (43%), Positives = 21/41 (50%), Gaps = 5/41 (12%)
 Frame = +1

Query: 193 GTVDG-----PLPEMRVRGVGNLALPIGARQARDLVFAGQP 300
           G  DG     P    RVRG+G+  LP+G   ARDL   G P
Sbjct: 68  GPADGCEVLRPAAAGRVRGLGDGQLPVGDAAARDLGAPGLP 108

 Score = 25.8 bits (55), Expect(2) = 0.090
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +3

Query: 276 RPGLRGPARALRQGIQNGDRPGCAQC 353
           R GLR P  A R G +   R G AQC
Sbjct: 149 REGLRPPLAAARGGREARGRAGSAQC 174

>pir||T46145 hypothetical protein T3A5.60 - Arabidopsis thaliana
           gi|6561971|emb|CAB62437.1| putative protein [Arabidopsis
           thaliana]
          Length = 319

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
 Frame = +1

Query: 121 VVGWKEQLKNALDGVTSRGTFAVTGTVDGP--------LPEMRVRGVGNLALPIGARQAR 276
           +VGW    K         G F + G V+G         L    ++ + N ++P+      
Sbjct: 96  IVGWSLYTKTKTGSGLPNGPFGLLGAVEGLSYLSVLAILVVFGIQFLDNGSVPVALLS-- 153

Query: 277 DLVFAGQPAPYGKGSKTVIDPAVRNAIQLEAHRVRFSKDWDETLS 411
            L+  G  A   KGS  V    +     L AH V + KDW+ETL+
Sbjct: 154 -LLARGTLAQPPKGSPGV---DIEQQEMLAAHNVEYVKDWNETLA 194

>ref|XP_327061.1| predicted protein [Neurospora crassa] gi|28925302|gb|EAA34380.1|
           predicted protein [Neurospora crassa]
          Length = 1701

 Score = 33.1 bits (74), Expect = 0.91
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -3

Query: 290 AKTRSLACLAPMGSARFPTPRTRIS-GSGPSTVPVTANVP 174
           A+    A +A     R P P T  + GSGP++VP TANVP
Sbjct: 102 ARLSRSAAIAYEARPRLPLPPTSAAPGSGPASVPATANVP 141



EST assemble image


clone accession position
1 LCL044a03_r AV628575 1 277
2 HCL022a08_r AV640766 1 430
3 HCL003e12_r AV639715 8 298




Chlamydomonas reinhardtii
Kazusa DNA Research Institute