Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002210A_C01 KCC002210A_c01
(588 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_638265.1| antifreeze glycopeptide AFGP related protein [X... 45 6e-04
ref|NP_787279.1| unknown [Tropheryma whipplei str. Twist] gi|284... 44 0.001
ref|NP_295868.1| ABC transporter, ATP-binding protein [Deinococc... 42 0.006
ref|NP_103505.1| probable transcriptional repressor [Mesorhizobi... 42 0.008
emb|CAD98435.1| hydroxyproline-rich glycoprotein dz-hrgp precurs... 42 0.008
>ref|NP_638265.1| antifreeze glycopeptide AFGP related protein [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|21114120|gb|AAM42189.1| antifreeze glycopeptide AFGP
related protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
Length = 628
Score = 45.4 bits (106), Expect = 6e-04
Identities = 48/150 (32%), Positives = 63/150 (42%), Gaps = 9/150 (6%)
Frame = -3
Query: 577 PHPPAQGTDCTAPWHHAAEQRGRAPRAAT*SRVL------QPAPPAPARACAAALARVPG 416
P P AQ D A + AP ++T S QPA P+PA A A A +P
Sbjct: 324 PLPMAQLIDAPAASSMVVQAPIDAPPSSTASSTASAPAYAQPALPSPAEAPAGAAKSLPA 383
Query: 415 PSAPAAQARR*DRCR*PGRAAPAVVRVCAQS*LQVPIEAASAVPRHCPSSA-PPKHPGAC 239
P+ P A A R AP+ V V A L P+ +A P++A PP P A
Sbjct: 384 PAPPLAPA----VARPAPAPAPSDVAVAAALSLPEPMAEGNAAAEAAPTAAPPPPAPIAA 439
Query: 238 YKHEPI--QMLLQTQ*HRPAPLPLTLGAKS 155
+ + L QT RPA +P A+S
Sbjct: 440 SQADASADASLAQTTLMRPAAMPSRTSAES 469
>ref|NP_787279.1| unknown [Tropheryma whipplei str. Twist] gi|28476158|gb|AAO44248.1|
unknown [Tropheryma whipplei str. Twist]
Length = 460
Score = 44.3 bits (103), Expect = 0.001
Identities = 58/193 (30%), Positives = 73/193 (37%), Gaps = 17/193 (8%)
Frame = -3
Query: 571 PPAQGTDCT-APWHHAAEQRGRAPRAAT*SRVLQPAPPAPARACAAALARVPGPSAPAAQ 395
PPA+ AP AA Q +AP+ A +PAP PA A A P + AAQ
Sbjct: 160 PPAKPAAAKPAPAKPAATQATQAPKPAA----AKPAPAKPAAAKPAPAKPAPSEATQAAQ 215
Query: 394 ARR*DRCR*PGRAAPAVVRVCAQS*LQVPIEAASAVP---RHCPSSA-----PPKHPG-- 245
P A PA + + P + A+A P + PS A PP P
Sbjct: 216 PPAKPAAAKPAPAKPAATQATQATKPAAPAKPAAAKPAPAKPAPSEATQAAQPPAKPAAA 275
Query: 244 --ACYKHEPIQ--MLLQTQ*HRPAPLPLTLGAKSCFGTRCRTWRS*ERAPHQDTRPLGQG 77
A K P + TQ +PA AK T S +AP Q T+P +
Sbjct: 276 KPAAAKPAPAKPAATQATQATKPAAPAKPAAAKPAAATH----SSSTQAPSQVTKPAAEK 331
Query: 76 PGG--ANVGRTKP 44
P AN TKP
Sbjct: 332 PSSTVANTQVTKP 344
Score = 34.7 bits (78), Expect = 1.0
Identities = 34/99 (34%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Frame = +1
Query: 292 PTPPQS--APAAMIARKPEPQLVQPYPVNGSGLNGGLVQPVPMGLAPAPKPLHMHAPVQA 465
P P + APA A KP P +P P + +P APA KP A QA
Sbjct: 127 PKPAAAKPAPAKPAAAKPAP--AKPAPSEATQAAQPPAKPAAAKPAPA-KP----AATQA 179
Query: 466 VQAAEHAIMSPRVAHVRAARPHDAMAPYSPYPXQAGEAS 582
QA + A P A AA+P AP P P +A +A+
Sbjct: 180 TQAPKPAAAKPAPAKPAAAKP----APAKPAPSEATQAA 214
Score = 33.1 bits (74), Expect = 3.0
Identities = 32/105 (30%), Positives = 42/105 (39%)
Frame = -3
Query: 571 PPAQGTDCTAPWHHAAEQRGRAPRAAT*SRVLQPAPPAPARACAAALARVPGPSAPAAQA 392
PPA+ T H ++ Q AP +A +PAP PA A A P + AAQ
Sbjct: 107 PPAKPAAAT---HSSSTQ---APSSAPKPAAAKPAPAKPAAAKPAPAKPAPSEATQAAQP 160
Query: 391 RR*DRCR*PGRAAPAVVRVCAQS*LQVPIEAASAVPRHCPSSAPP 257
P A PA + A Q P AA+ P++A P
Sbjct: 161 P-----AKPAAAKPAPAKPAATQATQAPKPAAAKPAPAKPAAAKP 200
Score = 31.6 bits (70), Expect = 8.6
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 4/103 (3%)
Frame = +1
Query: 286 ALPTPPQSAPAAMIARKPEPQLVQPYPVNGSGLNGGLVQPVPMGLAPAPKPLHMHA---P 456
A P P + A A + P+P +P P + +P P A +P A P
Sbjct: 167 AKPAPAKPA-ATQATQAPKPAAAKPAPAKPAAAKPAPAKPAPSEATQAAQPPAKPAAAKP 225
Query: 457 VQAVQAAEHAIMSPRVAHVRAARPHDAM-APYSPYPXQAGEAS 582
A AA A + + A A+P A AP P P +A +A+
Sbjct: 226 APAKPAATQATQATKPA--APAKPAAAKPAPAKPAPSEATQAA 266
>ref|NP_295868.1| ABC transporter, ATP-binding protein [Deinococcus radiodurans]
gi|7471037|pir||F75311 ABC transporter, ATP-binding
protein - Deinococcus radiodurans (strain R1)
gi|6459937|gb|AAF11688.1|AE002048_8 ABC transporter,
ATP-binding protein [Deinococcus radiodurans]
Length = 552
Score = 42.0 bits (97), Expect = 0.006
Identities = 31/83 (37%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +3
Query: 285 GTADAASIGTCSYDCAQTRTTAGAALPGQRQRSQRRACAAG---ADGPGTRAKAAAHARA 455
G A+S G+ + TTA PG R R +R A AA ADGP R A
Sbjct: 55 GLTIASSTGSFIHSSDVAATTAAPRPPGTRHRHRRGAGAAPRPFADGPARRG-------A 107
Query: 456 GAGGAGCRTRDHVAARGARPRCS 524
AGGA R ++H AA R C+
Sbjct: 108 AAGGAERRRQNHAAAAARRASCA 130
>ref|NP_103505.1| probable transcriptional repressor [Mesorhizobium loti]
gi|14022682|dbj|BAB49291.1| probable transcriptional
repressor [Mesorhizobium loti]
Length = 586
Score = 41.6 bits (96), Expect = 0.008
Identities = 36/105 (34%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Frame = +1
Query: 274 GSVGALPTPPQSAPAAMIARKP-EPQLVQPYPVNGSGLNGGLVQPVPM---GLAPAPKPL 441
G V A P P+ A KP EP+L +P P G + P P+ PAP P+
Sbjct: 179 GEVTARPNEPKMAEPKPSEPKPDEPKLTEPKPAEPKGQDVASAPPAPVPAPAPQPAPPPI 238
Query: 442 HMHAPVQAVQAAEHAIMSPR-VAHVR-AARPHDAMAPYSPYPXQA 570
+ P AV AA M P VA A P +AP P P A
Sbjct: 239 AANPPPVAVPAAPPVAMPPAPVAPPEVAVIPPPTVAPLPPPPPAA 283
>emb|CAD98435.1| hydroxyproline-rich glycoprotein dz-hrgp precursor, probable
[Cryptosporidium parvum]
Length = 203
Score = 41.6 bits (96), Expect = 0.008
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +1
Query: 292 PTPPQSAPAAMIARKPEPQLVQPYPVNGSGLNGGLVQPVPMGLAPAPKPLHMHAPVQAVQ 471
P PP P+ P P + PYPV GS + + P+PM P P P+ M P+ Q
Sbjct: 105 PPPPPPLPSPPPPTLPPPPSLPPYPVPGSQSSMPMPMPMPM---PMPMPMPMPMPMPTNQ 161
Query: 472 AAEHAIMSPRVAHVRAARPHDAMAPY-SPYPXQAGEASGS 588
P +A RP + Y +P P + G+ S +
Sbjct: 162 --------PYAPISQAPRPLPQLGSYFTPRPWKGGDNSSN 193