Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002209A_C01 KCC002209A_c01
(484 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_199329.1| GTP-binding protein-related; root hair defectiv... 196 9e-50
dbj|BAB90264.1| putative root hair defective 3 (RHD3) [Oryza sat... 195 3e-49
ref|NP_188003.1| root hair defective 3 (RHD3) [Arabidopsis thali... 194 5e-49
pir||H96754 probable GTP-binding protein [imported] - Arabidopsi... 163 1e-39
ref|NP_177439.1| root hair defective -related [Arabidopsis thali... 163 1e-39
>ref|NP_199329.1| GTP-binding protein-related; root hair defective 3 protein-like
[Arabidopsis thaliana] gi|9759601|dbj|BAB11389.1|
GTP-binding protein-like; root hair defective 3
protein-like [Arabidopsis thaliana]
Length = 834
Score = 196 bits (499), Expect = 9e-50
Identities = 93/148 (62%), Positives = 118/148 (78%)
Frame = +3
Query: 39 QVINGEGEFESAGVQSFVDKNELAQCRTNYAVVAIMGPQSSGKSTLLNYVFGTDFKMMDA 218
Q+I+G GEF G+ +FV K +L+ C +YAVVAIMGPQSSGKSTLLN++F T F+ MDA
Sbjct: 11 QLIDGNGEFNVKGLDNFVKKTKLSDCGLSYAVVAIMGPQSSGKSTLLNHLFKTSFREMDA 70
Query: 219 MEGRGQTTKGIWMSKSPKVADTTVLVMDLEGSDGRERGEDDTNFERQSALFALAVADVLL 398
GR QTTKGIWM++ + T+ MDLEG+DGRERGEDDT FE+QSALFA+AVAD++L
Sbjct: 71 FAGRSQTTKGIWMARCVGIEPFTI-AMDLEGTDGRERGEDDTTFEKQSALFAIAVADIVL 129
Query: 399 VNIWCHDIGREHGSGKPXVKTIFQVNLK 482
+N+WCHDIGRE + KP +KT+FQV L+
Sbjct: 130 INMWCHDIGREQAANKPLLKTVFQVMLR 157
>dbj|BAB90264.1| putative root hair defective 3 (RHD3) [Oryza sativa (japonica
cultivar-group)]
Length = 806
Score = 195 bits (495), Expect = 3e-49
Identities = 90/148 (60%), Positives = 124/148 (82%)
Frame = +3
Query: 39 QVINGEGEFESAGVQSFVDKNELAQCRTNYAVVAIMGPQSSGKSTLLNYVFGTDFKMMDA 218
Q+I+G+G F +G+++F+ + ++ +C +YAVV+IMGPQSSGKSTLLN++F T+F+ MDA
Sbjct: 8 QLIDGDGVFNVSGLENFMKEVKMGECGLSYAVVSIMGPQSSGKSTLLNHLFRTNFREMDA 67
Query: 219 MEGRGQTTKGIWMSKSPKVADTTVLVMDLEGSDGRERGEDDTNFERQSALFALAVADVLL 398
+GR QTTKGIWM+K+ + T LVMDLEG+DGRERGEDDT FE+QSALFALAV+D++L
Sbjct: 68 FKGRSQTTKGIWMAKAHNIEPCT-LVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVL 126
Query: 399 VNIWCHDIGREHGSGKPXVKTIFQVNLK 482
+N+WCHDIGRE + KP +KT+FQV ++
Sbjct: 127 INMWCHDIGREQAANKPLLKTVFQVMMR 154
>ref|NP_188003.1| root hair defective 3 (RHD3) [Arabidopsis thaliana]
gi|1839188|gb|AAB58375.1| root hair defective 3
[Arabidopsis thaliana] gi|20260178|gb|AAM12987.1|
unknown protein [Arabidopsis thaliana]
gi|22136246|gb|AAM91201.1| unknown protein [Arabidopsis
thaliana]
Length = 802
Score = 194 bits (493), Expect = 5e-49
Identities = 91/148 (61%), Positives = 121/148 (81%)
Frame = +3
Query: 39 QVINGEGEFESAGVQSFVDKNELAQCRTNYAVVAIMGPQSSGKSTLLNYVFGTDFKMMDA 218
Q+I+G+G F +GV F+ + +L +C +YAVV+IMGPQSSGKSTLLN++FGT+F+ MDA
Sbjct: 8 QLIDGDGVFNVSGVDHFIKEVKLDECGLSYAVVSIMGPQSSGKSTLLNHLFGTNFREMDA 67
Query: 219 MEGRGQTTKGIWMSKSPKVADTTVLVMDLEGSDGRERGEDDTNFERQSALFALAVADVLL 398
GR QTTKGIW+++ + TV VMDLEG+DGRERGEDDT FE+QSALFALAV+D++L
Sbjct: 68 FRGRSQTTKGIWIARCAGIEPCTV-VMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVL 126
Query: 399 VNIWCHDIGREHGSGKPXVKTIFQVNLK 482
+N+WCHDIGRE + KP +KT+FQV ++
Sbjct: 127 INMWCHDIGREQAANKPLLKTVFQVMMR 154
>pir||H96754 probable GTP-binding protein [imported] - Arabidopsis thaliana
gi|5903085|gb|AAD55643.1|AC008017_16 Putative
GTP-binding protein [Arabidopsis thaliana]
Length = 713
Score = 163 bits (412), Expect = 1e-39
Identities = 75/113 (66%), Positives = 96/113 (84%)
Frame = +3
Query: 144 MGPQSSGKSTLLNYVFGTDFKMMDAMEGRGQTTKGIWMSKSPKVADTTVLVMDLEGSDGR 323
MGPQSSGKSTLLN++FGT+F MDA +GR QTTKGIW+++ + T LVMDLEG+DGR
Sbjct: 1 MGPQSSGKSTLLNHLFGTNFMEMDAFKGRSQTTKGIWLARCAGIEPCT-LVMDLEGTDGR 59
Query: 324 ERGEDDTNFERQSALFALAVADVLLVNIWCHDIGREHGSGKPXVKTIFQVNLK 482
ERGEDDT FE+QSALFALA++D++L+N+WCHDIGRE + KP +KT+FQV ++
Sbjct: 60 ERGEDDTAFEKQSALFALAISDIVLINMWCHDIGREQAANKPLLKTVFQVMMR 112
>ref|NP_177439.1| root hair defective -related [Arabidopsis thaliana]
Length = 748
Score = 163 bits (412), Expect = 1e-39
Identities = 75/113 (66%), Positives = 96/113 (84%)
Frame = +3
Query: 144 MGPQSSGKSTLLNYVFGTDFKMMDAMEGRGQTTKGIWMSKSPKVADTTVLVMDLEGSDGR 323
MGPQSSGKSTLLN++FGT+F MDA +GR QTTKGIW+++ + T LVMDLEG+DGR
Sbjct: 1 MGPQSSGKSTLLNHLFGTNFMEMDAFKGRSQTTKGIWLARCAGIEPCT-LVMDLEGTDGR 59
Query: 324 ERGEDDTNFERQSALFALAVADVLLVNIWCHDIGREHGSGKPXVKTIFQVNLK 482
ERGEDDT FE+QSALFALA++D++L+N+WCHDIGRE + KP +KT+FQV ++
Sbjct: 60 ERGEDDTAFEKQSALFALAISDIVLINMWCHDIGREQAANKPLLKTVFQVMMR 112
