>KCC002204A_C01 KCC002204A_c01
cccttattgagttcgctgctcttgggcttcaaactgtagcaagttgtggccatcgcgttt
ggccctggtttCCGCGCTCGGCGCTGCTTTGTCACGTCGCAATTCCCGACGCCCGGCTAG
TATTGGGCCGTCAGGACAGCCTGTAGCGCCTGGCACCAGCGCTCTAGCACAGTGCAGTTG
CTATACTCGTGTCGGCCCCACCGGTGCGGGAAACCCTCCGGTGTCATCGAACCTTTTGGC
GTCGCTGCACGCGCTAGACGCCACAGCTGCTGGAGCACGACCGAGGCGCGTTTAAAAGCC
AAGCCCAGACCCGTGTGGTAACTGCAAGGGCAACCGTCCTGACCCCTCGGCGTCAAGTTT
CCGGTTCGTAACTCGAACGTGTCACACCAACTTCTGGCTCACAGCAGCCGGCATGGGAGC
CACCATCAGCTCCTGCGTGGAGCCGGGCCCCACCTTTGCCCTGTTTGAGGCGGTCCGCAC
GGGCGATGTGCGCCGCATCAACATGTGGCTGGGCCTGCAGCCGGAGCTCCTAAAGTACCG
GAACCTTT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002204A_C01 KCC002204A_c01
         (548 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_499703.1| COLlagen structural gene (col-98) [Caenorhabdit...    37  0.13
dbj|BAB89052.1| P0684C02.8 [Oryza sativa (japonica cultivar-group)]    35  0.15
dbj|BAB13469.1| KIAA1643 protein [Homo sapiens]                        37  0.18
dbj|BAC53810.1| OsNAC1 protein [Oryza sativa]                          37  0.23
ref|NP_694747.1| carboxypeptidase Z [Mus musculus] gi|19879981|g...    37  0.23

>ref|NP_499703.1| COLlagen structural gene (col-98) [Caenorhabditis elegans]
           gi|7499104|pir||T20906 hypothetical protein F14F7.1 -
           Caenorhabditis elegans gi|3875920|emb|CAB04111.1| C.
           elegans COL-98 protein (corresponding sequence F14F7.1)
           [Caenorhabditis elegans]
          Length = 305

 Score = 37.4 bits (85), Expect = 0.13
 Identities = 29/92 (31%), Positives = 34/92 (36%), Gaps = 4/92 (4%)
 Frame = +2

Query: 83  AALSRRNSRRPASIGPSGQPVAPGTSALAQCSCYTRVGPTGAGNPPVSSNLLASLHAL-- 256
           +A +   S R A  G   QP   G     QCS   R GP GAG  P       +  A   
Sbjct: 70  SATNSTRSARHAGYGGYAQPQGGGGGGGGQCSTCCRPGPPGAGGTPGKPGRPGAPGAWGM 129

Query: 257 --DATAAGARPRRV*KPSPDPCGNCKGNRPDP 346
             +    G+ P       P PC  C G RP P
Sbjct: 130 PGNPGKGGSGPCH--PVVPTPCKPCPGGRPGP 159

>dbj|BAB89052.1| P0684C02.8 [Oryza sativa (japonica cultivar-group)]
          Length = 231

 Score = 35.4 bits (80), Expect(2) = 0.15
 Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
 Frame = +2

Query: 35  CSKLWPSRLALVSALGAALSRRNSRRPASIGPSGQPVAPGTSALAQCSCYTRVGPTGAGN 214
           C +  P+R A+++ +           P    PS  P  P  + LA  S   ++ P  A  
Sbjct: 38  CRRSTPNRPAVIAIV-------IDLAPPLPAPSSSP--PPVAVLA-ASAERQLAPLTAQA 87

Query: 215 PPVSSNLLASLHALDATAAGARPRRV*KP-SPDPCGNCKGNRPDPSAS 355
           PP  +    S   +DA  AG RP     P  P P   C+   P PS+S
Sbjct: 88  PPNPTLATDSRSRVDALTAGNRPLVTSSPFPPSPAAGCRRRNPPPSSS 135

 Score = 20.8 bits (42), Expect(2) = 0.15
 Identities = 7/15 (46%), Positives = 11/15 (72%)
 Frame = +3

Query: 378 RVTPTSGSQQPAWEP 422
           R   +S S++PAW+P
Sbjct: 177 RPASSSTSRRPAWQP 191

>dbj|BAB13469.1| KIAA1643 protein [Homo sapiens]
          Length = 993

 Score = 37.0 bits (84), Expect = 0.18
 Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
 Frame = +2

Query: 113 PASIGPSGQPVAPGTSALAQCSCYTRVGPTG--AGNPPVSSNLLASLHALDATAAGARPR 286
           PAS+    +P+ PG  +  + +C    GP    A  P   S L ASL +L ATA G RP 
Sbjct: 18  PASVRAPERPL-PGLRSARRAACRAYSGPRTCPAHLPAARSALRASLASLPATARGLRPC 76

Query: 287 RV*KPSPDP 313
              +P+P P
Sbjct: 77  LRVRPAPQP 85

>dbj|BAC53810.1| OsNAC1 protein [Oryza sativa]
          Length = 347

 Score = 36.6 bits (83), Expect = 0.23
 Identities = 22/77 (28%), Positives = 36/77 (46%)
 Frame = +2

Query: 41  KLWPSRLALVSALGAALSRRNSRRPASIGPSGQPVAPGTSALAQCSCYTRVGPTGAGNPP 220
           +++   L L  A  AA+ RR +     +GPS  P+A     LA C+    +  +G G   
Sbjct: 148 RVFKKSLELAPAAAAAVGRRGAGAGTDVGPSSMPMADDVVGLAPCALPPLMDVSGGGGGA 207

Query: 221 VSSNLLASLHALDATAA 271
            +++L A+  A  A  A
Sbjct: 208 GTTSLSATAGAAAAPPA 224

>ref|NP_694747.1| carboxypeptidase Z [Mus musculus]
           gi|19879981|gb|AAM00219.1|AF356844_1 carboxypeptidase Z
           [Mus musculus]
          Length = 654

 Score = 36.6 bits (83), Expect = 0.23
 Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
 Frame = +2

Query: 218 PVSSNLLASLHALDATAAGARPRRV*KPSPDPCGNCKGNRPDPSASSFRFVTRTC----- 382
           P    LLA+L AL   A  ARP     P PDP G C+      SA+      RTC     
Sbjct: 2   PTMPLLLAALAALAVLALAARPSPSCSPGPDPSGKCQRLVYTHSATCVDLHLRTCADAAY 61

Query: 383 -HTNF 394
            HT+F
Sbjct: 62  NHTSF 66

EST assemble image

clone accession position 1 HCL002d10_r AV639652 1 539 2 HCL025d01_r AV640956 72 548

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