KCC002200A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002200A_C01 KCC002200A_c01
ccacaacgatactaaatagcattattcccgcgactTGGTGCAAGTAGGGTCGCGACGAGA
AAACGCGCGCCAGTAGTAGAGGAAAAGTCGCGGAGCTTGCGAAATGCAACCCGGGGCCTG
GCTGCTAGGGCTATCGGCCCTAAGACGCCAGGGATCGTCCACACGGCACCGCACGCAAGC
GTTGCTGTGCCGCGCGCGGCTGTCGCAAGCGAATGCATCGTCAGCCCCGAGCCCTAGGCC
GCTGCTCGCGGCGCTGGGCTTCGCTACCTCCGCAACGGACCCCTCGCCAATGGTGAAAAA
GCTTCTAGTAGCCAACCGCGGTGAAATCGCTTGCCGCATCCTCAGCACGGCCCGGAAGCT
CGGCGTCCCAACTGTCGCGGTCTACAGCGAAGCAGACCGGCGCGCCAAACACGTGGAGTT
GGCGGATGAAAGCTTCTGCATTGGCGCCGCGGCGGCACGTGACAGCTACCTGCGCGCCGA
CGCCA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002200A_C01 KCC002200A_c01
         (485 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_464882.1| acetyl-CoA carboxylase subunit (biotin carboxyl...    91  1e-17
ref|NP_635639.1| biotin carboxylase [Xanthomonas campestris pv. ...    90  1e-17
ref|NP_518386.1| PROBABLE ACYL-COA CARBOXYLASE ALPHA CHAIN PROTE...    90  2e-17
ref|NP_470730.1| acetyl-CoA carboxylase subunit (biotin carboxyl...    89  2e-17
ref|NP_540842.1| acetyl-CoA carboxylase alpha chain / propionyl-...    89  3e-17

>ref|NP_464882.1| acetyl-CoA carboxylase subunit (biotin carboxylase subunit)
           [Listeria monocytogenes EGD-e] gi|25293953|pir||AE1244
           acetyl-CoA carboxylase chain (biotin carboxylase chain)
           [imported] - Listeria monocytogenes (strain EGD-e)
           gi|16410773|emb|CAC99435.1| acetyl-CoA carboxylase
           subunit (biotin carboxylase subunit) [Listeria
           monocytogenes]
          Length = 454

 Score = 90.5 bits (223), Expect = 1e-17
 Identities = 41/61 (67%), Positives = 53/61 (86%)
 Frame = +2

Query: 290 MVKKLLVANRGEIACRILSTARKLGVPTVAVYSEADRRAKHVELADESFCIGAAAARDSY 469
           M+KK+LVANRGEIA RI+  A++LGV TVA+YSEADR A H++LADE++C+G AA +DSY
Sbjct: 1   MIKKVLVANRGEIAVRIIRAAKELGVETVAIYSEADREALHIQLADEAYCVGPAATKDSY 60

Query: 470 L 472
           L
Sbjct: 61  L 61

>ref|NP_635639.1| biotin carboxylase [Xanthomonas campestris pv. campestris str. ATCC
           33913] gi|21111209|gb|AAM39563.1| biotin carboxylase
           [Xanthomonas campestris pv. campestris str. ATCC 33913]
          Length = 675

 Score = 90.1 bits (222), Expect = 1e-17
 Identities = 42/66 (63%), Positives = 54/66 (81%)
 Frame = +2

Query: 287 PMVKKLLVANRGEIACRILSTARKLGVPTVAVYSEADRRAKHVELADESFCIGAAAARDS 466
           P   K+L+ANRGEIACR+++T R+LG+ TVAVYS+ADR A+HV LADE+  IGA+ A+ S
Sbjct: 13  PYFDKVLIANRGEIACRVIATCRRLGIATVAVYSDADRDARHVRLADEAIHIGASPAQQS 72

Query: 467 YLRADA 484
           YLR DA
Sbjct: 73  YLRGDA 78

>ref|NP_518386.1| PROBABLE ACYL-COA CARBOXYLASE ALPHA CHAIN PROTEIN [Ralstonia
           solanacearum] gi|17427274|emb|CAD13793.1| PROBABLE
           ACYL-COA CARBOXYLASE ALPHA CHAIN PROTEIN [Ralstonia
           solanacearum]
          Length = 712

 Score = 89.7 bits (221), Expect = 2e-17
 Identities = 47/92 (51%), Positives = 60/92 (65%)
 Frame = +2

Query: 206 QANASSAPSPRPLLAALGFATSATDPSPMVKKLLVANRGEIACRILSTARKLGVPTVAVY 385
           QA A +     P +  +       + +PM  KLL+ANRGEIACR+ +T R+LG+ TVAVY
Sbjct: 10  QALAEAKTGHAPPVQTMPRKKKHKETNPMFTKLLIANRGEIACRVAATCRRLGIRTVAVY 69

Query: 386 SEADRRAKHVELADESFCIGAAAARDSYLRAD 481
           S+AD  A+HV   DE+  IG  AARDSYLRAD
Sbjct: 70  SDADVDARHVAACDEAIHIGEPAARDSYLRAD 101

>ref|NP_470730.1| acetyl-CoA carboxylase subunit (biotin carboxylase subunit)
           [Listeria innocua] gi|25293954|pir||AI1606 acetyl-CoA
           carboxylase chain (biotin carboxylase chain) [imported]
           - Listeria innocua (strain Clip11262)
           gi|16413867|emb|CAC96625.1| acetyl-CoA carboxylase
           subunit (biotin carboxylase subunit) [Listeria innocua]
          Length = 454

 Score = 89.4 bits (220), Expect = 2e-17
 Identities = 40/61 (65%), Positives = 53/61 (86%)
 Frame = +2

Query: 290 MVKKLLVANRGEIACRILSTARKLGVPTVAVYSEADRRAKHVELADESFCIGAAAARDSY 469
           M+KK+LVANRGEIA RI+  A++LGV TVA+YSEAD+ A H++LADE++C+G AA +DSY
Sbjct: 1   MIKKVLVANRGEIAVRIIRAAKELGVETVAIYSEADKEALHIQLADEAYCVGPAATKDSY 60

Query: 470 L 472
           L
Sbjct: 61  L 61

>ref|NP_540842.1| acetyl-CoA carboxylase alpha chain / propionyl-CoA carboxylase
           alpha chain [Brucella melitensis]
           gi|25293910|pir||AG3492 propionyl-CoA carboxylase (EC
           6.4.1.3) [imported] - Brucella melitensis (strain 16M)
           gi|17983972|gb|AAL53106.1| acetyl-CoA carboxylase alpha
           chain / propionyl-CoA carboxylase alpha chain [Brucella
           melitensis 16M]
          Length = 678

 Score = 89.0 bits (219), Expect = 3e-17
 Identities = 41/65 (63%), Positives = 53/65 (81%)
 Frame = +2

Query: 290 MVKKLLVANRGEIACRILSTARKLGVPTVAVYSEADRRAKHVELADESFCIGAAAARDSY 469
           M +K+L+ANRGEIACR++ TARKLG+ TVA+YS+AD RA HVE+ADE+  +G AA+  SY
Sbjct: 24  MFQKILIANRGEIACRVIRTARKLGIATVAIYSDADARALHVEMADEAVRVGPAASAQSY 83

Query: 470 LRADA 484
           L  DA
Sbjct: 84  LNVDA 88



EST assemble image


clone accession position
1 HCL002a12_r AV639627 1 461
2 HCL039e10_r AV641738 36 485




Chlamydomonas reinhardtii
Kazusa DNA Research Institute