Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002195A_C01 KCC002195A_c01
(311 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_198122.1| ribosomal protein S21 - like [Arabidopsis thali... 120 4e-27
ref|NP_190957.1| 40S ribosomal protein S21 homolog [Arabidopsis ... 119 1e-26
sp|Q41852|RS21_MAIZE 40S RIBOSOMAL PROTEIN S21 gi|7440559|pir||T... 117 3e-26
gb|AAP44638.1| 40S subunit ribosomal protein [Oryza sativa (japo... 117 4e-26
gb|AAM63744.1| 40S ribosomal protein S21 homolog [Arabidopsis th... 117 6e-26
>ref|NP_198122.1| ribosomal protein S21 - like [Arabidopsis thaliana]
Length = 85
Score = 120 bits (302), Expect = 4e-27
Identities = 54/80 (67%), Positives = 70/80 (87%)
Frame = +1
Query: 28 MINDEGQVVDLYIPRKCAWTNKLITAKDHASVQINIGHLDANGVYSNQYTTFAIAGNVRA 207
M N+EGQV +LYIPRKC+ TN+LIT+KDHASVQ+NIGHLDANG+Y+ Q+TTFA+ G VRA
Sbjct: 1 MQNEEGQVTELYIPRKCSATNRLITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRA 60
Query: 208 MGEGDSALDIMWRKKQVEAE 267
G+ DS +D +W+KK+VEA+
Sbjct: 61 QGDADSGVDRLWQKKKVEAK 80
>ref|NP_190957.1| 40S ribosomal protein S21 homolog [Arabidopsis thaliana]
gi|27923842|sp|Q9M337|R21B_ARATH 40S ribosomal protein
S21-2 gi|11276646|pir||T45929 40S ribosomal protein S21
homolog - Arabidopsis thaliana
gi|7630009|emb|CAB88351.1| 40S ribosomal protein S21
homolog [Arabidopsis thaliana]
gi|17473933|gb|AAL38376.1| 40S ribosomal protein S21
homolog [Arabidopsis thaliana]
gi|20148437|gb|AAM10109.1| 40S ribosomal protein S21
homolog [Arabidopsis thaliana]
Length = 82
Score = 119 bits (298), Expect = 1e-26
Identities = 53/80 (66%), Positives = 69/80 (86%)
Frame = +1
Query: 28 MINDEGQVVDLYIPRKCAWTNKLITAKDHASVQINIGHLDANGVYSNQYTTFAIAGNVRA 207
M ND GQV +LYIPRKC+ TN++IT+KDHASVQ+NIGHLDANG+Y+ Q+TTFA+ G VRA
Sbjct: 1 MENDAGQVTELYIPRKCSATNRMITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRA 60
Query: 208 MGEGDSALDIMWRKKQVEAE 267
G+ DS +D +W+KK+VEA+
Sbjct: 61 QGDADSGVDRLWQKKKVEAK 80
>sp|Q41852|RS21_MAIZE 40S RIBOSOMAL PROTEIN S21 gi|7440559|pir||T03945 ribosomal protein
S21 - maize gi|1419372|emb|CAA67225.1| ribosomal protein
S21 [Zea mays]
Length = 81
Score = 117 bits (294), Expect = 3e-26
Identities = 52/78 (66%), Positives = 67/78 (85%)
Frame = +1
Query: 28 MINDEGQVVDLYIPRKCAWTNKLITAKDHASVQINIGHLDANGVYSNQYTTFAIAGNVRA 207
M N+EG+ VDLY+PRKC+ TN++ITAKDHASVQINIGHLDANG+Y +TTFA++G VRA
Sbjct: 1 MQNEEGKTVDLYVPRKCSATNRIITAKDHASVQINIGHLDANGLYDGHFTTFALSGFVRA 60
Query: 208 MGEGDSALDIMWRKKQVE 261
G+ DS+LD +W+KK+ E
Sbjct: 61 QGDADSSLDRLWQKKKAE 78
>gb|AAP44638.1| 40S subunit ribosomal protein [Oryza sativa (japonica
cultivar-group)]
Length = 82
Score = 117 bits (293), Expect = 4e-26
Identities = 50/80 (62%), Positives = 69/80 (85%)
Frame = +1
Query: 28 MINDEGQVVDLYIPRKCAWTNKLITAKDHASVQINIGHLDANGVYSNQYTTFAIAGNVRA 207
M N+EGQ+VDLY+PRKC+ TN++ITAKDHASVQINIGH+D NG+Y ++TTFA++G +RA
Sbjct: 1 MQNEEGQMVDLYVPRKCSTTNRIITAKDHASVQINIGHVDENGLYDGRFTTFALSGFIRA 60
Query: 208 MGEGDSALDIMWRKKQVEAE 267
G+ DSALD +W+K++ E +
Sbjct: 61 QGDADSALDRLWQKRKAEVK 80
>gb|AAM63744.1| 40S ribosomal protein S21 homolog [Arabidopsis thaliana]
Length = 82
Score = 117 bits (292), Expect = 6e-26
Identities = 52/80 (65%), Positives = 68/80 (85%)
Frame = +1
Query: 28 MINDEGQVVDLYIPRKCAWTNKLITAKDHASVQINIGHLDANGVYSNQYTTFAIAGNVRA 207
M ND GQV +LYIP KC+ TN++IT+KDHASVQ+NIGHLDANG+Y+ Q+TTFA+ G VRA
Sbjct: 1 MENDAGQVTELYIPSKCSATNRMITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRA 60
Query: 208 MGEGDSALDIMWRKKQVEAE 267
G+ DS +D +W+KK+VEA+
Sbjct: 61 QGDADSGVDRLWQKKKVEAK 80
