Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002189A_C01 KCC002189A_c01
(697 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAH45463.1| Similar to proteasome (prosome, macropain) 26S su... 189 5e-47
ref|NP_171973.1| 26S proteasome regulatory subunit (RPN2), putat... 180 2e-44
ref|NP_180832.1| 26S proteasome regulatory subunit (RPN2), putat... 179 4e-44
dbj|BAC40055.1| unnamed protein product [Mus musculus] 172 6e-42
gb|AAH31587.1| Psmd1 protein [Mus musculus] 172 6e-42
>gb|AAH45463.1| Similar to proteasome (prosome, macropain) 26S subunit, non-ATPase,
1 [Danio rerio]
Length = 887
Score = 189 bits (479), Expect = 5e-47
Identities = 92/170 (54%), Positives = 124/170 (72%)
Frame = +1
Query: 145 VSSAAGLLSLLAEENDDLKQHALTHLNKVVHDYWFQISGSIGSVEALYEDDDFAHRELAA 324
++SAAG++SLL E+ LK+ AL LN VV+D+W +IS S+G +E LYED+ F RE AA
Sbjct: 2 ITSAAGIISLLDEDEPQLKEFALHKLNSVVNDFWAEISESVGKIEVLYEDETFRSREFAA 61
Query: 325 LVASKVFYHLGELDDALNYALGAGSLFDVEEQSEYVTTLVARCLDQYFEKRVKAAEARGE 504
LVASKVFYHLG D++L+YALGAG LF+V + SEYV T++A+C+D Y ++RV+ AE E
Sbjct: 62 LVASKVFYHLGAFDESLSYALGAGDLFNVNDDSEYVETIIAKCIDHYTKQRVENAELPEE 121
Query: 505 EAEAAVDPRLTDIVERMLDKCLAAGQYEQAIGVCLEGRRLDRLEGAILRA 654
E + +DPRL IV +M +CL +Y+QAIG+ LE RRLD E IL +
Sbjct: 122 EEKKDIDPRLEGIVNKMFQRCLGDHKYKQAIGIALETRRLDIFEKTILES 171
>ref|NP_171973.1| 26S proteasome regulatory subunit (RPN2), putative [Arabidopsis
thaliana] gi|25347943|pir||C86181 hypothetical protein
[imported] - Arabidopsis thaliana
gi|7211984|gb|AAF40455.1|AC004809_13 Strong similarity
to the SEN3-like tRNA-processing protein F24L7.13 from
A. thaliana gi|2914700 on BAC gb|AC003974. EST
gb|AA712969 comes from this gene. [Arabidopsis thaliana]
gi|28393231|gb|AAO42045.1| putative 26S proteasome
regulatory subunit (RPN2) [Arabidopsis thaliana]
Length = 1001
Score = 180 bits (456), Expect = 2e-44
Identities = 94/172 (54%), Positives = 133/172 (76%), Gaps = 2/172 (1%)
Frame = +1
Query: 145 VSSAAGLLSLLAEENDDLKQHALTHLNKVVHDYWFQISGSIGSVEALYEDDDFAH--REL 318
VSSA GLL++L E + LK HAL++L ++V +W +IS S+ +E+LYED++F R+L
Sbjct: 6 VSSAGGLLAMLNEPHPSLKLHALSYLIRLVDQFWPEISTSVPIIESLYEDEEFDQHQRQL 65
Query: 319 AALVASKVFYHLGELDDALNYALGAGSLFDVEEQSEYVTTLVARCLDQYFEKRVKAAEAR 498
AAL+ASKVFY+LGEL+D+L+YALGAGSLFDV E S+Y+ TL+++ +D+Y R KA E+
Sbjct: 66 AALLASKVFYYLGELNDSLSYALGAGSLFDVSEDSDYIHTLLSKAIDEYAILRSKAVES- 124
Query: 499 GEEAEAAVDPRLTDIVERMLDKCLAAGQYEQAIGVCLEGRRLDRLEGAILRA 654
E E +DPRL IVERMLDKC+ G+Y+QA+G+ +E RRLD+LE AI+++
Sbjct: 125 SEVVE--IDPRLVAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAIIKS 174
>ref|NP_180832.1| 26S proteasome regulatory subunit (RPN2), putative [Arabidopsis
thaliana] gi|7486095|pir||T00795 26S proteasome
regulatory subunit [imported] - Arabidopsis thaliana
gi|2914700|gb|AAC04490.1| 26S proteasome regulatory
subunit (RPN2), putative [Arabidopsis thaliana]
gi|20466790|gb|AAM20712.1| 26S proteasome regulatory
subunit [Arabidopsis thaliana]
Length = 1004
Score = 179 bits (454), Expect = 4e-44
Identities = 93/174 (53%), Positives = 130/174 (74%), Gaps = 2/174 (1%)
Frame = +1
Query: 139 PAVSSAAGLLSLLAEENDDLKQHALTHLNKVVHDYWFQISGSIGSVEALYEDDDFA--HR 312
P VSSA GLL++L E + LK HAL++LN +V +W +IS S+ +E+LYED++F R
Sbjct: 4 PMVSSAGGLLAMLNEPHPVLKLHALSNLNNLVDQFWPEISTSVPIIESLYEDEEFDLHQR 63
Query: 313 ELAALVASKVFYHLGELDDALNYALGAGSLFDVEEQSEYVTTLVARCLDQYFEKRVKAAE 492
+LAAL+ SKVFY+LGEL+D+L+YALGAG LFDV E S+YV TL+A+ +D+Y R KA E
Sbjct: 64 QLAALLVSKVFYYLGELNDSLSYALGAGPLFDVSEDSDYVHTLLAKAIDEYASLRSKAVE 123
Query: 493 ARGEEAEAAVDPRLTDIVERMLDKCLAAGQYEQAIGVCLEGRRLDRLEGAILRA 654
+ +DPRL IVERML KC++ G+Y+QA+G+ +E RRLD+LE AI+++
Sbjct: 124 S---NEMVDIDPRLEAIVERMLGKCISDGKYQQAMGIAIECRRLDKLEEAIIKS 174
>dbj|BAC40055.1| unnamed protein product [Mus musculus]
Length = 838
Score = 172 bits (435), Expect = 6e-42
Identities = 87/170 (51%), Positives = 120/170 (70%)
Frame = +1
Query: 145 VSSAAGLLSLLAEENDDLKQHALTHLNKVVHDYWFQISGSIGSVEALYEDDDFAHRELAA 324
++SAAG++SLL EE LK+ AL LN VV+D+W +IS S+ +E LYED+ F R+ AA
Sbjct: 2 ITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 325 LVASKVFYHLGELDDALNYALGAGSLFDVEEQSEYVTTLVARCLDQYFEKRVKAAEARGE 504
LVASKVFYHLG +++LNYALGAG LF+V + SEYV T++A+C+D Y ++ V+ A+ E
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADL-PE 120
Query: 505 EAEAAVDPRLTDIVERMLDKCLAAGQYEQAIGVCLEGRRLDRLEGAILRA 654
+ +D RL IV +M +CL +Y+QAIG+ LE RRLD E IL +
Sbjct: 121 GEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILES 170
>gb|AAH31587.1| Psmd1 protein [Mus musculus]
Length = 824
Score = 172 bits (435), Expect = 6e-42
Identities = 87/170 (51%), Positives = 120/170 (70%)
Frame = +1
Query: 145 VSSAAGLLSLLAEENDDLKQHALTHLNKVVHDYWFQISGSIGSVEALYEDDDFAHRELAA 324
++SAAG++SLL EE LK+ AL LN VV+D+W +IS S+ +E LYED+ F R+ AA
Sbjct: 2 ITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 325 LVASKVFYHLGELDDALNYALGAGSLFDVEEQSEYVTTLVARCLDQYFEKRVKAAEARGE 504
LVASKVFYHLG +++LNYALGAG LF+V + SEYV T++A+C+D Y ++ V+ A+ E
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADL-PE 120
Query: 505 EAEAAVDPRLTDIVERMLDKCLAAGQYEQAIGVCLEGRRLDRLEGAILRA 654
+ +D RL IV +M +CL +Y+QAIG+ LE RRLD E IL +
Sbjct: 121 GEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILES 170
