KCC002186A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002186A_C01 KCC002186A_c01
cagctcatagtaatatCCCTGGTGCGAACTCAGATTGATTAGAGAAGGCCAAGATACGCC
CTAACCCCTAAGGGGACTTTCAACGCGGTCATGAGTCCTGCAGCCTCAGACCGGCCCAAG
GTCGGGGTGGGAGTCCTCCTCTTCAAAGGCGAAAATGTTCTTGTCGGGAAAAGGAAGGGC
TCTCATGGATCCGGAACCTTTGCGTTGCCTGGGGGTCATCTCGAGCTAGGGGAAAGCTTT
GAGCAGTGTGCCATCAGGGAGGTGCTGGAGGAGACAGGTGTGCAAATACGGGATCCTGTG
TTTGCTTACGCAACAAACACCGTCTTCAACGCCACCACCCACTACGTCACAATTTTCATG
CGCGTTGATGTCGAGCCGGGCGTGGAGGCCAAGCTGATGGAGCCAGACAAGTGCGAGGGC
TGGACTTGGGTGCCGTGGGACAGCATACCCGAGCCCATGTTTGAGCCGCTCCTGGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002186A_C01 KCC002186A_c01
         (476 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_177044.1| MutT/nudix family protein [Arabidopsis thaliana...   134  5e-31
ref|NP_251459.1| hypothetical protein [Pseudomonas aeruginosa PA...   132  2e-30
ref|ZP_00136086.1| COG1051: ADP-ribose pyrophosphatase [Pseudomo...   124  6e-28
ref|XP_214236.1| similar to RIKEN cDNA A730068G11 [Rattus norveg...   117  5e-26
ref|NP_766115.1| MTH2 protein; MutT homolog 2 [Mus musculus] gi|...   115  2e-25

>ref|NP_177044.1| MutT/nudix family protein [Arabidopsis thaliana]
           gi|25404774|pir||D96712 probable mutT protein F14K14.13
           [imported] - Arabidopsis thaliana
           gi|12324137|gb|AAG52038.1|AC011914_8 putative mutT
           protein; 68398-67881 [Arabidopsis thaliana]
           gi|21593739|gb|AAM65706.1| putative mutT protein
           [Arabidopsis thaliana] gi|26450213|dbj|BAC42225.1|
           putative mutT protein [Arabidopsis thaliana]
           gi|28827456|gb|AAO50572.1| putative mutT protein
           [Arabidopsis thaliana]
          Length = 147

 Score =  134 bits (337), Expect = 5e-31
 Identities = 63/123 (51%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
 Frame = +1

Query: 115 PKVGVGVLLFKGENVLVGKRKGSHGSGTFALPGGHLELGESFEQCAIREVLEETGVQIRD 294
           P+V V V +  G ++L+G+R+ S G+ TFALPGGHLE GESFE+CA REV+EETG++I  
Sbjct: 8   PRVAVVVFILNGNSILLGRRRSSIGNSTFALPGGHLEFGESFEECAAREVMEETGLKIEK 67

Query: 295 PVFAYATNTVFN---ATTHYVTIFMR-VDVEPGVEAKLMEPDKCEGWTWVPWDSIPEPMF 462
                 TN VF      +HYV++ +R V V+P  E K MEP+KCEGW W  W+++P+P+F
Sbjct: 68  MKLLTVTNNVFKEAPTPSHYVSVSIRAVLVDPSQEPKNMEPEKCEGWDWYDWENLPKPLF 127

Query: 463 EPL 471
            PL
Sbjct: 128 WPL 130

>ref|NP_251459.1| hypothetical protein [Pseudomonas aeruginosa PA01]
           gi|11349676|pir||H83300 hypothetical protein PA2769
           [imported] - Pseudomonas aeruginosa (strain PAO1)
           gi|9948849|gb|AAG06157.1|AE004704_11 hypothetical
           protein PA2769 [Pseudomonas aeruginosa PAO1]
          Length = 136

 Score =  132 bits (332), Expect = 2e-30
 Identities = 60/119 (50%), Positives = 80/119 (66%)
 Frame = +1

Query: 115 PKVGVGVLLFKGENVLVGKRKGSHGSGTFALPGGHLELGESFEQCAIREVLEETGVQIRD 294
           P+VGVGVL+ +   VL+G+RKGSHG+G ++ PGGHLE GE+ E CA+RE LEET + + +
Sbjct: 4   PQVGVGVLILRDGKVLLGRRKGSHGAGCWSAPGGHLEFGEAVEDCALREALEETDLALSE 63

Query: 295 PVFAYATNTVFNATTHYVTIFMRVDVEPGVEAKLMEPDKCEGWTWVPWDSIPEPMFEPL 471
                 +N VF    HY+T F+        EA+LMEPDKC+GW W  W  +PEP+F PL
Sbjct: 64  LRHGPFSNDVFEG-RHYLTAFILAGCAEDAEARLMEPDKCDGWAWFDWADLPEPLFAPL 121

>ref|ZP_00136086.1| COG1051: ADP-ribose pyrophosphatase [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 129

 Score =  124 bits (311), Expect = 6e-28
 Identities = 56/115 (48%), Positives = 76/115 (65%)
 Frame = +1

Query: 127 VGVLLFKGENVLVGKRKGSHGSGTFALPGGHLELGESFEQCAIREVLEETGVQIRDPVFA 306
           +GVL+ +   VL+G+RKGSHG+G ++ PGGHLE GE+ E CA+RE LEETG+ + +    
Sbjct: 1   MGVLILRDGKVLLGRRKGSHGAGCWSAPGGHLEFGEAVEDCALREALEETGLALSELRHG 60

Query: 307 YATNTVFNATTHYVTIFMRVDVEPGVEAKLMEPDKCEGWTWVPWDSIPEPMFEPL 471
             +N VF    HY+T F+        EA+LMEP KC+GW W  W  +PEP+F PL
Sbjct: 61  PFSNDVFEG-RHYLTAFILAGCAEDAEARLMEPGKCDGWAWFDWADLPEPLFAPL 114

>ref|XP_214236.1| similar to RIKEN cDNA A730068G11 [Rattus norvegicus]
          Length = 170

 Score =  117 bits (294), Expect = 5e-26
 Identities = 62/119 (52%), Positives = 80/119 (67%), Gaps = 6/119 (5%)
 Frame = +1

Query: 112 RPKVGVGVLLFKGEN---VLVGKRKGSHGSGTFALPGGHLELGESFEQCAIREVLEETGV 282
           RP VGVGV++   E+   VL+GKRKGS G+G+F LPGGHLE GE++E+CA RE  EE G+
Sbjct: 10  RPGVGVGVVVLSCEHPRCVLLGKRKGSFGAGSFQLPGGHLEFGETWEECAQRETWEEAGL 69

Query: 283 QIRDPVFAYATNT-VFNATTHYVTIFMR--VDVEPGVEAKLMEPDKCEGWTWVPWDSIP 450
           ++++  FA   NT V     HYVTI M+  VDV    E + MEP+K E W WVPW+  P
Sbjct: 70  RLKNVRFASVVNTFVEKENYHYVTILMKGEVDVTHESEPRNMEPEKNESWEWVPWEEFP 128

>ref|NP_766115.1| MTH2 protein; MutT homolog 2 [Mus musculus]
           gi|26328469|dbj|BAC27973.1| unnamed protein product [Mus
           musculus] gi|26333949|dbj|BAC30692.1| unnamed protein
           product [Mus musculus]
          Length = 170

 Score =  115 bits (289), Expect = 2e-25
 Identities = 60/119 (50%), Positives = 79/119 (65%), Gaps = 6/119 (5%)
 Frame = +1

Query: 112 RPKVGVGVLLFKGEN---VLVGKRKGSHGSGTFALPGGHLELGESFEQCAIREVLEETGV 282
           RP VGVGV++   E+   VL+GKRKGS G+G+F LPGGHLE GE++E+CA RE  EE G+
Sbjct: 10  RPGVGVGVVVLSCEHPRCVLLGKRKGSFGAGSFQLPGGHLEFGETWEECAQRETWEEAGL 69

Query: 283 QIRDPVFAYATNT-VFNATTHYVTIFMR--VDVEPGVEAKLMEPDKCEGWTWVPWDSIP 450
            +++  FA   N+ V     HYVTI M+  VD+    E + MEP+K E W WVPW+  P
Sbjct: 70  HLKNVCFASVVNSFVEKENYHYVTILMKGEVDMTHDSEPRNMEPEKNESWEWVPWEEFP 128



EST assemble image


clone accession position
1 HC100g11_r AV639548 1 476
2 MX034c06_r BP087425 17 345




Chlamydomonas reinhardtii
Kazusa DNA Research Institute