Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002183A_C01 KCC002183A_c01
(499 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_797036.1| putative type IV pilin [Vibrio parahaemolyticus... 32 3.3
pir||S27922 nuclear antigen EBNA-3C - human herpesvirus 4 gi|330... 32 3.3
gb|AAK76395.1| Rev-Erb beta 1 [Danio rerio] 32 4.3
ref|XP_330140.1| hypothetical protein [Neurospora crassa] gi|289... 32 5.6
dbj|BAC79150.1| syntaxin homologue [Aspergillus oryzae] 32 5.6
>ref|NP_797036.1| putative type IV pilin [Vibrio parahaemolyticus RIMD 2210633]
gi|28805643|dbj|BAC58920.1| putative type IV pilin
[Vibrio parahaemolyticus]
Length = 185
Score = 32.3 bits (72), Expect = 3.3
Identities = 23/72 (31%), Positives = 35/72 (47%)
Frame = +3
Query: 264 LTAASVSACIG*ACPVDRVPFRGHALGR*VQGERSGFC*VPALTRSKVVLRQQCYWGHDL 443
+T A +SA + A P + F + + R + E GF +S+ VLR++ W H +
Sbjct: 26 ITVAVLSALLATAAPSFKNVFETNKMQR-LANELHGFV---IEGKSEAVLRRERLWAHII 81
Query: 444 SSCLCDSDGAWR 479
S SDG WR
Sbjct: 82 MSGSSSSDGNWR 93
>pir||S27922 nuclear antigen EBNA-3C - human herpesvirus 4
gi|330410|gb|AAA45895.1| nuclear antigen EBNA-3C
Length = 1069
Score = 32.3 bits (72), Expect = 3.3
Identities = 20/66 (30%), Positives = 25/66 (37%)
Frame = -3
Query: 206 RLRHDPYVLQSYEP*MILSCQKVR*RSGPPWPFKESHKTHG*RFALWPSQGEGTHPRAPL 27
R DPYV Y + SC PWP + H + ALWP + H + P
Sbjct: 843 RFPQDPYV---YSGGQLSSCPGY----AGPWPSRPQHPRYRHTLALWPREPRHGHSQGPW 895
Query: 26 LPCIDH 9
P H
Sbjct: 896 KPWSAH 901
>gb|AAK76395.1| Rev-Erb beta 1 [Danio rerio]
Length = 404
Score = 32.0 bits (71), Expect = 4.3
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Frame = -1
Query: 472 APSESQRQDDKSWPQ*HCWRRT----TFDRVRAGT*QNPERSP*TQRPSACPRNGTRSTG 305
A SE+ ++++ PQ HCWRR+ T R T Q RSP T+ + C RN
Sbjct: 162 AASETLSREEEE-PQMHCWRRSDCPNTTGPYREQTAQQCIRSP-TENRTYCRRNMNEGGN 219
Query: 304 HAH---PMHA 284
AH PM A
Sbjct: 220 RAHLVCPMSA 229
>ref|XP_330140.1| hypothetical protein [Neurospora crassa] gi|28927445|gb|EAA36398.1|
hypothetical protein [Neurospora crassa]
Length = 528
Score = 31.6 bits (70), Expect = 5.6
Identities = 19/47 (40%), Positives = 25/47 (52%)
Frame = -2
Query: 441 SRGPSSTVGAEQLLTGSGRAPNKTRNAHPELSARVHAPETAHDQPGT 301
+R PSSTV A + T + + N T+N P S V +TA D P T
Sbjct: 329 ARVPSSTVSAPKTATSTLKRQNSTKN-RPRPSLGVPVKQTAKDHPPT 374
>dbj|BAC79150.1| syntaxin homologue [Aspergillus oryzae]
Length = 343
Score = 31.6 bits (70), Expect = 5.6
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
Frame = -2
Query: 207 EIKA*PLRASKL*AMNDPFMPEGKMTERAPLAVQRKSQNTWLAFRIVAQPGGG------- 49
E++ ++AS+ + + F+ +A L QR + + R QPGG
Sbjct: 166 EVRTKNIQASR--SRTENFVSSVSSKSQAALDTQRSDSPLYTSGRRTPQPGGSSDLLTLE 223
Query: 48 --NPSPCTPPSMHRPLQL 1
NPSP PSMH QL
Sbjct: 224 PSNPSPLGRPSMHSDQQL 241
