KCC002182A_c02
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002182A_C02 KCC002182A_c02
GAGCTCTCGAAATGCCCTCGACACTAGAGGACCTCGCGGGCCTCGCCCAAAAGAACTCCC
CAGACTTGTTGCCTACGCTAGGGTACGCAGTCCTCTGGCTCATCGTGCGCTGGATCTTCT
ATAAGCTCCTACGCTCATACTTCAAGACGCTGCCGGCTACCTCAGTCCTCAAGAATGTCG
GGATGCAAGAGAAGGTGCTGGAGGAGTCCTTCGCCATTATCGGGGCCCTGGTCGCTACAG
TCCTCGGCTTCATGGCATTCCGGCAAAGCGATCGAGGCACGTGCGGGCTGATGAACACGC
GGGGCTGCTTCGGCGAGTGGCCGCACGGCACGGACGCGGACGTGGGCGGCGTGCGCGACC
CCACCGGCGCCATCGCGCTGTACCACAATGTGGAGCTGGGCTGGTACCTGCACTACCTCA
TCAAGCACCACATGGGCATGGGCATGGAGGACAACCTGCAGATGCACCTGCACCACTTCT
CCACCATCACGCTGCTGCTCATCTCATACCTGCTCAACCTGCACCGCGCGGGTGTGCTGG
TGCTGTCGCTGCTCAACATCTCCAACCCCTTCCTGCACGTGGCCAAGGTGGTGCACTACG
TGGAGGCCAAGGGCGACACGCTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002182A_C02 KCC002182A_c02
         (623 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_597264.1| LONGEVITY ASSURANCE PROTEIN 1 [Encephalitozoon ...    61  2e-08
emb|CAC03512.1| LAGL protein [Suberites domuncula]                     56  5e-07
ref|XP_311331.1| ENSANGP00000001657 [Anopheles gambiae] gi|30177...    55  1e-06
ref|NP_766444.1| RIKEN cDNA 4732462C07 [Mus musculus] gi|2632479...    54  1e-06
gb|AAB19113.1| longevity assurance factor [Schizosaccharomyces p...    52  5e-06

>ref|NP_597264.1| LONGEVITY ASSURANCE PROTEIN 1 [Encephalitozoon cuniculi]
           gi|19171050|emb|CAD26440.1| LONGEVITY ASSURANCE PROTEIN
           1 [Encephalitozoon cuniculi]
          Length = 287

 Score = 60.8 bits (146), Expect = 2e-08
 Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
 Frame = +3

Query: 339 DVGGVRDPTGAIALYHNVELGWY---LHYLIKHHMGMGMEDNLQMHLHHFSTITLLLISY 509
           D  GV      +  ++++E  +Y   L YL   H     +D LQM  HH  T+ LL +SY
Sbjct: 102 DTWGVHGAPSKVLFFYHLEFSYYFVELFYLFSEH---AYKDFLQMVTHHIVTMLLLFLSY 158

Query: 510 LLNLHRAGVLVLSLLNISNPFLHVAKVVHYVEAK 611
             +L RAGV ++ + +IS+PFL + K+ +Y+  K
Sbjct: 159 HNDLLRAGVAIIVIHDISDPFLEIGKLTNYIHDK 192

>emb|CAC03512.1| LAGL protein [Suberites domuncula]
          Length = 330

 Score = 55.8 bits (133), Expect = 5e-07
 Identities = 27/85 (31%), Positives = 48/85 (55%)
 Frame = +3

Query: 360 PTGAIALYHNVELGWYLHYLIKHHMGMGMEDNLQMHLHHFSTITLLLISYLLNLHRAGVL 539
           P+ A+  Y   +L +Y   L+     +  +D  QM +HH  TI LL+ +Y +N+ + GVL
Sbjct: 136 PSNAVLSYWAFQLAFYSSLLVSQFSDIRRKDFYQMCVHHIVTIALLMFAYTVNMFQIGVL 195

Query: 540 VLSLLNISNPFLHVAKVVHYVEAKG 614
           +  + + S+  L +AK++HY   +G
Sbjct: 196 IALVHDFSDVPLELAKLLHYASYEG 220

>ref|XP_311331.1| ENSANGP00000001657 [Anopheles gambiae] gi|30177813|gb|EAA06779.2|
           ENSANGP00000001657 [Anopheles gambiae str. PEST]
          Length = 283

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 55/194 (28%), Positives = 82/194 (41%), Gaps = 14/194 (7%)
 Frame = +1

Query: 34  SRASPKRTPQTCCLR*GTQSSGSSCAGSSISSYAHTSRRCRLPQSSRMSGCKRRCWRSPS 213
           S +S   T  +CC    + SSG+S   SS SS +  +  C    SS  SG       + S
Sbjct: 4   SSSSSGATTSSCCTT--SCSSGTSSCSSSTSSGSSGTTSCSSCTSSCSSGTSSCSSATSS 61

Query: 214 PLSGPWSLQSSASWHSGKAIEARAG**TRGAAS----------ASGRTARTRTWAACATP 363
             SG  S  SS S  +       +G  +R +++          +SG T+ +   ++C++ 
Sbjct: 62  CSSGTTSCTSSTSSSNSCTSSCSSGTSSRSSSTTSSSSGTSSCSSGTTSSSSCASSCSSS 121

Query: 364 PAPSRCTTMWSWAGTCTTSSSTTWAWAWRTTCRCTCTTSPPSRCCSSHTCSTCTARV--- 534
            +     T    +GT + SS TT          C+C TS  S C SS  CS+C +     
Sbjct: 122 TSSCSSGTSSCRSGTSSCSSCTT---------SCSCCTSSCSSCASS--CSSCASSSSTT 170

Query: 535 -CWCCRCSTSPTPS 573
            C CC  S+S   S
Sbjct: 171 SCSCCASSSSSCAS 184

 Score = 50.4 bits (119), Expect = 2e-05
 Identities = 51/185 (27%), Positives = 71/185 (37%), Gaps = 15/185 (8%)
 Frame = +1

Query: 91  SSGSSCAGSSISSYAHTSRRCRLPQSSRMSGCKRRCWRSPSPLSGPWSLQSSASWHSGKA 270
           SSG++   SS SS    +  C    SSR S        + S  SG  S  S AS  S   
Sbjct: 63  SSGTTSCTSSTSSSNSCTSSCSSGTSSRSSSTTSSSSGTSSCSSGTTSSSSCASSCSSST 122

Query: 271 IEARAG**TRGAASASGRTARTRTWAACATPPAPSRCTTMWSWAGTCTTSSSTTWAWAWR 450
               +G  T    S +   +   T  +C T    S C++  S   +C +SSSTT      
Sbjct: 123 SSCSSG--TSSCRSGTSSCSSCTTSCSCCT----SSCSSCASSCSSCASSSSTT------ 170

Query: 451 TTCRCTCTTSPPSRCCSSHTCSTCTARVCWCCR---------------CSTSPTPSCTWP 585
               C+C  S  S C SS  CS+C +    C                 CS+S + S +  
Sbjct: 171 ---SCSCCASSSSSCASS--CSSCASSCSSCASSCSSGTTSSSSCASSCSSSTSSSSSGT 225

Query: 586 RWCTT 600
             C++
Sbjct: 226 TSCSS 230

 Score = 47.8 bits (112), Expect = 1e-04
 Identities = 46/165 (27%), Positives = 69/165 (40%), Gaps = 9/165 (5%)
 Frame = +1

Query: 109 AGSSISSYAHTSRRCRLPQSSRMSGCKRRCWRSPSPLSGPWSLQSSASWHSGKAIEARAG 288
           + SS SS A TS  C    SS  S C        S  +   S  SS S  +     A + 
Sbjct: 2   SASSSSSGATTSSCCTTSCSSGTSSCSSSTSSGSSGTTSCSSCTSSCSSGTSSCSSATSS 61

Query: 289 **TRGAASASGRTARTRTWAACATPPAPSRCTTMWSWAGTCTTSSSTTWAWAWRTTCRCT 468
             +   +  S  ++     ++C++  +    +T  S +GT + SS TT +    ++C  +
Sbjct: 62  CSSGTTSCTSSTSSSNSCTSSCSSGTSSRSSSTTSSSSGTSSCSSGTTSS----SSCASS 117

Query: 469 CTTSPPSRCCSSHT---------CSTCTARVCWCCRCSTSPTPSC 576
           C++S  S  CSS T         CS+CT      C C TS   SC
Sbjct: 118 CSSSTSS--CSSGTSSCRSGTSSCSSCTT----SCSCCTSSCSSC 156

 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 55/198 (27%), Positives = 82/198 (40%), Gaps = 8/198 (4%)
 Frame = +1

Query: 7   SKCPRH*RTSRASPKRTPQTCCLR*GTQSSGS-----SCAGSSISSYAHTSRRCRLPQSS 171
           S C     +S +S      +C  R GT S  S     SC  SS SS A +   C    S+
Sbjct: 112 SSCASSCSSSTSSCSSGTSSC--RSGTSSCSSCTTSCSCCTSSCSSCASSCSSCASSSST 169

Query: 172 RMSGCKRRCWRSPSPLSGPWSLQSSASWHSGKAIEARAG**TRGAASASGRTARTRTWAA 351
               C   C  S S  +   S  S AS  S  A           ++ +SG T+ +   ++
Sbjct: 170 TSCSC---CASSSSSCAS--SCSSCASSCSSCA-----------SSCSSGTTSSSSCASS 213

Query: 352 CATPPAPSRCTTMWSWAGTCTTSSSTTWAWAWRTTCRCTCTTSPPSRCCSSHTCSTCTAR 531
           C++       +T  S +GT + SS TT +    + C  +C++S  S C  +   S+C + 
Sbjct: 214 CSS-------STSSSSSGTTSCSSGTTSS----SCCTSSCSSSTSSSCSGTTASSSCASS 262

Query: 532 VCWC---CRCSTSPTPSC 576
              C   C  STS + SC
Sbjct: 263 CSSCASSCSSSTSSSSSC 280

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 50/169 (29%), Positives = 73/169 (42%), Gaps = 3/169 (1%)
 Frame = +1

Query: 82  GTQSSGSSCAGS---SISSYAHTSRRCRLPQSSRMSGCKRRCWRSPSPLSGPWSLQSSAS 252
           GT SS SSCA S   S SS +  +  CR   SS  S C   C    S  S   S  SS +
Sbjct: 107 GTTSS-SSCASSCSSSTSSCSSGTSSCRSGTSS-CSSCTTSCSCCTSSCSSCASSCSSCA 164

Query: 253 WHSGKAIEARAG**TRGAASASGRTARTRTWAACATPPAPSRCTTMWSWAGTCTTSSSTT 432
             S               AS+S   A + +  A +     S C++  + + +C +S S++
Sbjct: 165 SSSSTTS-------CSCCASSSSSCASSCSSCASSCSSCASSCSSGTTSSSSCASSCSSS 217

Query: 433 WAWAWRTTCRCTCTTSPPSRCCSSHTCSTCTARVCWCCRCSTSPTPSCT 579
            + +   T  C+  T+  S C SS  CS+ T+  C     S+S   SC+
Sbjct: 218 TSSSSSGTTSCSSGTTSSSCCTSS--CSSSTSSSCSGTTASSSCASSCS 264

 Score = 42.7 bits (99), Expect = 0.004
 Identities = 45/163 (27%), Positives = 68/163 (41%), Gaps = 5/163 (3%)
 Frame = +1

Query: 31  TSRASPKRTPQTCCLR*GTQSSGSSCAGSSISSYAHTSRRCRLPQSSRMSGCKRRCWRSP 210
           TS  S   T  +CC      SS SSCA S  S  + +S       +S  S C   C    
Sbjct: 136 TSSCSSCTTSCSCCT-----SSCSSCASSCSSCASSSSTTSCSCCASSSSSCASSCSSCA 190

Query: 211 SPLSGPWSLQSSASWHSGKAIEARAG**TRGAASASGRTARTRTWAACATPPAPSRCTTM 390
           S  S   S  SS +  S     + +   +  ++S+SG T+       C++    S C T 
Sbjct: 191 SSCSSCASSCSSGTTSSSSCASSCS---SSTSSSSSGTTS-------CSSGTTSSSCCTS 240

Query: 391 WSWAGTCTTSSSTTWAWAWRTTCR-----CTCTTSPPSRCCSS 504
              + T ++ S TT + +  ++C      C+ +TS  S C SS
Sbjct: 241 SCSSSTSSSCSGTTASSSCASSCSSCASSCSSSTSSSSSCASS 283

>ref|NP_766444.1| RIKEN cDNA 4732462C07 [Mus musculus] gi|26324798|dbj|BAC26153.1|
           unnamed protein product [Mus musculus]
           gi|34785857|gb|AAH57629.1| RIKEN cDNA 4732462C07 [Mus
           musculus]
          Length = 384

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 32/106 (30%), Positives = 54/106 (50%)
 Frame = +3

Query: 288 LMNTRGCFGEWPHGTDADVGGVRDPTGAIALYHNVELGWYLHYLIKHHMGMGMEDNLQMH 467
           L NTR C+  +P+         +  T  +  Y+ +EL +Y   ++     +  +D   M 
Sbjct: 159 LWNTRHCWYNYPY---------QPLTADLHYYYILELSFYWSLMVSQFTDIKRKDFGIMF 209

Query: 468 LHHFSTITLLLISYLLNLHRAGVLVLSLLNISNPFLHVAKVVHYVE 605
           LHH +TI L+  SY+ N+ R G LVL L + ++  L  AK+ +Y +
Sbjct: 210 LHHLATIFLITFSYVNNMARVGTLVLCLHDSADALLEAAKMANYAK 255

>gb|AAB19113.1| longevity assurance factor [Schizosaccharomyces pombe]
          Length = 387

 Score = 52.4 bits (124), Expect = 5e-06
 Identities = 38/174 (21%), Positives = 78/174 (43%), Gaps = 1/174 (0%)
 Frame = +3

Query: 84  YAVLWLIVRWIFYKLLRSY-FKTLPATSVLKNVGMQEKVLEESFAIIGALVATVLGFMAF 260
           + + W+IV   F  ++  Y F+       ++N  +  +  E+ ++    L    LG   +
Sbjct: 117 FPIFWVIVFTAFRVIVMDYVFRPFVLNWGVRNRKVIIRFCEQGYSFFYYLCFWFLGLYIY 176

Query: 261 RQSDRGTCGLMNTRGCFGEWPHGTDADVGGVRDPTGAIALYHNVELGWYLHYLIKHHMGM 440
           R S+  +    N    F ++P    + +            Y+ ++LG++L  ++  H+  
Sbjct: 177 RSSNYWS----NEEKLFEDYPQYYMSPL---------FKAYYLIQLGFWLQQILVLHLEQ 223

Query: 441 GMEDNLQMHLHHFSTITLLLISYLLNLHRAGVLVLSLLNISNPFLHVAKVVHYV 602
              D+ QM  HH  T  L+++SY  N  R G  +L + ++S+  L   K++ Y+
Sbjct: 224 RRADHWQMFAHHIVTCALIILSYGFNFLRVGNAILYIFDLSDYILSGGKMLKYL 277



EST assemble image


clone accession position
1 LC079f02_r AV624576 1 584
2 HC098c04_r AV639350 82 503
3 LCL001f04_r AV626044 102 580
4 LC079h02_r AV624592 112 617
5 MXL017b01_r BP094022 182 735




Chlamydomonas reinhardtii
Kazusa DNA Research Institute