Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002179A_C01 KCC002179A_c01
(507 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAH49046.1| Similar to eukaryotic translation initiation fact... 102 1e-27
ref|NP_187747.1| eukaryotic translation initiation factor 3 subu... 108 2e-27
gb|AAG53636.1|AF291712_1 initiation factor 3g [Arabidopsis thali... 108 2e-27
emb|CAC27531.1| eukaryotic translation initiation factor 3 p42 [... 102 2e-27
gb|AAP36240.1| Homo sapiens eukaryotic translation initiation fa... 102 6e-27
>gb|AAH49046.1| Similar to eukaryotic translation initiation factor 3, subunit 4
delta, 44kDa [Danio rerio]
Length = 293
Score = 102 bits (255), Expect(2) = 1e-27
Identities = 46/71 (64%), Positives = 60/71 (83%)
Frame = +3
Query: 114 SEDVTEGDLQELFRPFGAVSRIFLAVDKNTGENRGFAFVNYVHRDDADRAIRNLNGFGYD 293
SED E DLQELFRPFG++SRI+LA DKNTG+++GFA +++ R+DA RAI ++GFGYD
Sbjct: 220 SEDTRETDLQELFRPFGSISRIYLAKDKNTGQSKGFALISFHRREDAARAIAGVSGFGYD 279
Query: 294 NLILRVEWAQP 326
+LIL VEWA+P
Sbjct: 280 HLILNVEWAKP 290
Score = 41.6 bits (96), Expect(2) = 1e-27
Identities = 24/38 (63%), Positives = 27/38 (70%), Gaps = 3/38 (7%)
Frame = +2
Query: 8 KAGSYVPPSLRNRGPGDGESMQKKR--EDN-SIRVTNL 112
K G YVPPSLR+ G GESMQ R +DN +IRVTNL
Sbjct: 182 KTGKYVPPSLRDGGTRRGESMQPNRRADDNATIRVTNL 219
>ref|NP_187747.1| eukaryotic translation initiation factor 3 subunit g (eIF3g)
[Arabidopsis thaliana] gi|9755847|emb|CAC01929.1|
translation initiation factor 3, subunit g (eIF3g)
[Arabidopsis thaliana]
gi|12322907|gb|AAG51445.1|AC008153_18 putative
eukaryotic translation initiation factor 3 subunit;
21071-22901 [Arabidopsis thaliana]
gi|16226341|gb|AAL16140.1|AF428308_1 AT3g11400/F24K9_7
[Arabidopsis thaliana] gi|18377870|gb|AAL67121.1|
AT3g11400/F24K9_7 [Arabidopsis thaliana]
gi|22137220|gb|AAM91455.1| AT3g11400/F24K9_7
[Arabidopsis thaliana]
Length = 294
Score = 108 bits (271), Expect(2) = 2e-27
Identities = 49/72 (68%), Positives = 59/72 (81%)
Frame = +3
Query: 114 SEDVTEGDLQELFRPFGAVSRIFLAVDKNTGENRGFAFVNYVHRDDADRAIRNLNGFGYD 293
SED E DL ELF PFGAV+R+++A+D+ TG +RGF FVN+V R+DA RAI LNG+GYD
Sbjct: 221 SEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYD 280
Query: 294 NLILRVEWAQPR 329
NLILRVEWA PR
Sbjct: 281 NLILRVEWATPR 292
Score = 35.0 bits (79), Expect(2) = 2e-27
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 2 APKAG--SYVPPSLRNRGPGD--GESMQKKREDNSIRVTNLVGGRDGRRP 139
AP G +YVPPS+R G M+++ ++NS+RVTNL D R P
Sbjct: 180 APGTGKAAYVPPSMRAGADRSAVGSDMRRRNDENSVRVTNL--SEDTREP 227
>gb|AAG53636.1|AF291712_1 initiation factor 3g [Arabidopsis thaliana]
gi|21593472|gb|AAM65439.1| putative eukaryotic
translation initiation factor 3 subunit [Arabidopsis
thaliana]
Length = 294
Score = 108 bits (271), Expect(2) = 2e-27
Identities = 49/72 (68%), Positives = 59/72 (81%)
Frame = +3
Query: 114 SEDVTEGDLQELFRPFGAVSRIFLAVDKNTGENRGFAFVNYVHRDDADRAIRNLNGFGYD 293
SED E DL ELF PFGAV+R+++A+D+ TG +RGF FVN+V R+DA RAI LNG+GYD
Sbjct: 221 SEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYD 280
Query: 294 NLILRVEWAQPR 329
NLILRVEWA PR
Sbjct: 281 NLILRVEWATPR 292
Score = 35.0 bits (79), Expect(2) = 2e-27
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 2 APKAG--SYVPPSLRNRGPGD--GESMQKKREDNSIRVTNLVGGRDGRRP 139
AP G +YVPPS+R G M+++ ++NS+RVTNL D R P
Sbjct: 180 APGTGKAAYVPPSMRAGADRSAVGSDMRRRNDENSVRVTNL--SEDTREP 227
>emb|CAC27531.1| eukaryotic translation initiation factor 3 p42 [Platichthys flesus]
Length = 125
Score = 102 bits (255), Expect(2) = 2e-27
Identities = 46/71 (64%), Positives = 60/71 (83%)
Frame = +3
Query: 114 SEDVTEGDLQELFRPFGAVSRIFLAVDKNTGENRGFAFVNYVHRDDADRAIRNLNGFGYD 293
SED E DLQELFRPFG++SRI+LA DKNTG+++G AF+++ R+DA RAI ++GFGYD
Sbjct: 52 SEDTRETDLQELFRPFGSISRIYLAKDKNTGQSKGLAFISFHRREDAARAIAGVSGFGYD 111
Query: 294 NLILRVEWAQP 326
+LIL VEWA+P
Sbjct: 112 HLILNVEWAKP 122
Score = 40.8 bits (94), Expect(2) = 2e-27
Identities = 24/40 (60%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Frame = +2
Query: 8 KAGSYVPPSLRNRGPGDGESMQKKR----EDN-SIRVTNL 112
K G YVPPSLR+ G GESMQ R +DN +IRVTNL
Sbjct: 12 KTGKYVPPSLRDGGTRRGESMQPNRRGGADDNATIRVTNL 51
>gb|AAP36240.1| Homo sapiens eukaryotic translation initiation factor 3, subunit 4
delta, 44kDa [synthetic construct]
Length = 321
Score = 102 bits (255), Expect(2) = 6e-27
Identities = 46/71 (64%), Positives = 60/71 (83%)
Frame = +3
Query: 114 SEDVTEGDLQELFRPFGAVSRIFLAVDKNTGENRGFAFVNYVHRDDADRAIRNLNGFGYD 293
SED E DLQELFRPFG++SRI+LA DK TG+++GFAF+++ R+DA RAI ++GFGYD
Sbjct: 247 SEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYD 306
Query: 294 NLILRVEWAQP 326
+LIL VEWA+P
Sbjct: 307 HLILNVEWAKP 317
Score = 39.3 bits (90), Expect(2) = 6e-27
Identities = 23/38 (60%), Positives = 26/38 (67%), Gaps = 3/38 (7%)
Frame = +2
Query: 8 KAGSYVPPSLRNRGPGDGESMQKKR--EDN-SIRVTNL 112
K G YVPPSLR+ GESMQ R +DN +IRVTNL
Sbjct: 209 KTGKYVPPSLRDGASRRGESMQPNRRADDNATIRVTNL 246
