Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002178A_C01 KCC002178A_c01
(562 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC86735.1| unnamed protein product [Homo sapiens] 33 3.4
ref|NP_814695.1| PTS system, IIABC components [Enterococcus faec... 33 3.4
ref|XP_235328.2| similar to RIKEN cDNA 4930429H24 [Rattus norveg... 32 4.5
ref|XP_088420.1| hypothetical protein XP_088420 [Homo sapiens] 32 5.9
ref|NP_196185.1| expressed protein [Arabidopsis thaliana] gi|975... 32 7.7
>dbj|BAC86735.1| unnamed protein product [Homo sapiens]
Length = 175
Score = 32.7 bits (73), Expect = 3.4
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -1
Query: 133 THMVHFMFTCVAMCNPYLLDKPTVQHRITVLGLKAHIHTHTQTH 2
TH + TC+ C D T H T+ H+HTHTQTH
Sbjct: 11 THTHAHIRTCIHTCT----DTHTHMHTHTLTYTHIHMHTHTQTH 50
>ref|NP_814695.1| PTS system, IIABC components [Enterococcus faecalis V583]
gi|29343001|gb|AAO80765.1| PTS system, IIABC components
[Enterococcus faecalis V583]
Length = 722
Score = 32.7 bits (73), Expect = 3.4
Identities = 15/32 (46%), Positives = 19/32 (58%)
Frame = -1
Query: 262 KEVSDCAVRVRAFRKARQKQIKENAWSRAGSL 167
KEV C R+R K R+K E AW RAG++
Sbjct: 487 KEVDACMTRLRVSVKDREKVGSEEAWKRAGAM 518
>ref|XP_235328.2| similar to RIKEN cDNA 4930429H24 [Rattus norvegicus]
Length = 723
Score = 32.3 bits (72), Expect = 4.5
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 307 RTMRGKAQSYPVSPVNACMNACVPACHRNSLAS 405
R + G QS ++ V+ C AC CHRN LAS
Sbjct: 223 RQLNGLRQSKILTDVSICSGACEVPCHRNVLAS 255
>ref|XP_088420.1| hypothetical protein XP_088420 [Homo sapiens]
Length = 175
Score = 32.0 bits (71), Expect = 5.9
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Frame = +3
Query: 3 CVCVCV*MCAFRPRTVILCWTVGLSSRYGLHIATQVNMKCTICVT----LVNGACQPYMR 170
CVCVC +CA +V +C + + LH + + +CV + GA + + +
Sbjct: 8 CVCVCASVCACVCASVCMCARASVCTCVSLHACLCMCARVCLCVCTRVHVTTGAFRVWYK 67
Query: 171 LPALDQA-FSFICF 209
+ Q F F+CF
Sbjct: 68 MVLKWQRFFVFVCF 81
>ref|NP_196185.1| expressed protein [Arabidopsis thaliana] gi|9759091|dbj|BAB09660.1|
contains similarity to unknown
protein~gb|AAF47871.1~gene_id:MJJ3.6 [Arabidopsis
thaliana]
Length = 820
Score = 31.6 bits (70), Expect = 7.7
Identities = 45/194 (23%), Positives = 62/194 (31%), Gaps = 46/194 (23%)
Frame = -1
Query: 529 PSNRTMCLEPAPEV-----ESVPDHAPYCLLVSHCVWLITGGKH---------SNRKQAS 392
P NR L+P ++ ES P C VW G H S+R Q +
Sbjct: 445 PPNREFILKPTKKMLHIQAESTPGSP--CPRCPEPVWRPCVGHHLAAEKRMICSDRTQFA 502
Query: 391 CDGMQAH-----THSCMH----------SLEKQGRTA-----------------PCPSSC 308
CD + + H C + SL+K+ + PCP C
Sbjct: 503 CDNLCGNPLPCGNHYCSYFCHALDIRSSSLDKRSESCEKCDLRCQKERTPRCQHPCPRRC 562
Query: 307 APSDSHNFKAT*PLPKEVSDCAVRVRAFRKARQKQIKENAWSRAGSLI*G*HAPFTSVTH 128
P D K L K C V AF + E +A S H + TH
Sbjct: 563 HPEDCPPCKT---LVKRSCHCGAMVHAFECIYYNTMSEKDQMKARSCRGPCHRKLPNCTH 619
Query: 127 MVHFMFTCVAMCNP 86
+ C +C+P
Sbjct: 620 L------CPEICHP 627
