>KCC002163A_C01 KCC002163A_c01
gcaacctgccgcgcgagctggaggccgcctgcgagtccttccgcaacttctacctgtcca
cacacagcgggcggcgcctcACGTTCCAGCCCAACATGGGCACAGCAGACCTCCGAGCCG
TGTTCGGCGCTGGGCGGCGGCACGAACTGAACGTGTCCACATACCAGATGTGTGTGCTGC
TGTTGTTCAACGAGGCTGACTCGCTCAGCTACCGCGACATCGCGCAGGCGACGGAAATCC
CGGCACCGGACCTGAAGCGCGCGCTGCAGTCGTTGGCGTGCGTCAAGGGGCGGAACGTGC
TGCGCAAGGAGCCGGCGGGCAAGGACGTGGCGGACAGCGACGTGTTCTTCTACAACGACA
AGTTCACCAGCAAGCTCATCAAGGTCAAGATCAGCACCGTGGCCGCCACCAAGGAGGGCG
AGAGCGAGAAGGCGGAGACGCGGCAAAAGGTGGAGGAGGACCGCAAGCCGCAGATCGAGG
CCGCCATCGTGCGCATCATGAAGGCCCGCCAGCGGCTCGACCACAACACCATCATCACCG
AGGTGACGCGCCAGCTGCAGGCGCGCTTTGTGCCCAATCCCGCCACCATCAAGAAGCGCA
TCGAGAGCCTCATCGAGCGCGAGTTCCTGGCCCGTGACGAGGCCGACCGCAAGTTCTATA
CCTACGTGGCCTAAGCAAGCAGAGCGGGCAATGCTAGCCACAGCGCATTCCTACTACCAC
GCACTGGCAGGATGATTAGCAGGAGTCTGTCT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002163A_C01 KCC002163A_c01
         (752 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAD41902.1| OSJNBa0033G05.3 [Oryza sativa (japonica cultivar...   325  6e-88
ref|NP_174005.1| E3 ubiquitin ligase SCF complex subunit Cullin,...   321  9e-87
emb|CAC85344.1| cullin 3a [Arabidopsis thaliana]                      321  9e-87
emb|CAC87839.1| cullin 3B [Arabidopsis thaliana]                      320  2e-86
ref|NP_177125.1| E3 ubiquitin ligase SCF complex subunit Cullin,...   320  2e-86

>emb|CAD41902.1| OSJNBa0033G05.3 [Oryza sativa (japonica cultivar-group)]
            gi|32490060|emb|CAE05979.1| OSJNBa0063C18.20 [Oryza
            sativa (japonica cultivar-group)]
          Length = 731

 Score =  325 bits (832), Expect = 6e-88
 Identities = 163/222 (73%), Positives = 185/222 (82%)
 Frame = +3

Query: 6    LPRELEAACESFRNFYLSTHSGRRLTFQPNMGTADLRAVFGAGRRHELNVSTYQMCVLLL 185
            LP E+    E FR FYL TH+GRRLT+Q NMG AD++A FG GRRHELNVSTYQMCVL+L
Sbjct: 511  LPPEIVDISEKFRAFYLGTHNGRRLTWQTNMGNADIKATFG-GRRHELNVSTYQMCVLML 569

Query: 186  FNEADSLSYRDIAQATEIPAPDLKRALQSLACVKGRNVLRKEPAGKDVADSDVFFYNDKF 365
            FN AD L+Y DI QAT IP  DLKR LQSLACVKG+NVLRKEP  KD+++ D F+YNDKF
Sbjct: 570  FNSADGLTYGDIEQATGIPHADLKRCLQSLACVKGKNVLRKEPMSKDISEDDTFYYNDKF 629

Query: 366  TSKLIKVKISTVAATKEGESEKAETRQKVEEDRKPQIEAAIVRIMKARQRLDHNTIITEV 545
            TSKL+KVKI TV A KE E EK ETRQ+VEEDRKPQIEAAIVRIMK+R+ LDHN+IITEV
Sbjct: 630  TSKLVKVKIGTVVAQKETEPEKLETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNSIITEV 689

Query: 546  TRQLQARFVPNPATIKKRIESLIEREFLARDEADRKFYTYVA 671
            T+QLQ+RF+PNP  IKKRIESLIEREFL RD+ DRK Y Y+A
Sbjct: 690  TKQLQSRFLPNPVVIKKRIESLIEREFLERDKVDRKMYRYLA 731

>ref|NP_174005.1| E3 ubiquitin ligase SCF complex subunit Cullin, putative [Arabidopsis
            thaliana] gi|25354602|pir||A86395 hypothetical protein
            T2P11.2 [imported] - Arabidopsis thaliana
            gi|4262186|gb|AAD14503.1| Highly similar to cullin 3
            [Arabidopsis thaliana]
            gi|9295728|gb|AAF87034.1|AC006535_12 T24P13.25
            [Arabidopsis thaliana] gi|34364502|emb|CAC87120.1| cullin
            3a [Arabidopsis thaliana]
          Length = 732

 Score =  321 bits (822), Expect = 9e-87
 Identities = 155/223 (69%), Positives = 184/223 (82%)
 Frame = +3

Query: 3    NLPRELEAACESFRNFYLSTHSGRRLTFQPNMGTADLRAVFGAGRRHELNVSTYQMCVLL 182
            NLP E+   CE FR++YL TH+GRRL++Q NMGTAD++A+FG G++HELNVST+QMCVL+
Sbjct: 510  NLPAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADIKAIFGKGQKHELNVSTFQMCVLM 569

Query: 183  LFNEADSLSYRDIAQATEIPAPDLKRALQSLACVKGRNVLRKEPAGKDVADSDVFFYNDK 362
            LFN +D LSY++I QATEIPA DLKR LQSLACVKG+NV++KEP  KD+ + D+F  NDK
Sbjct: 570  LFNNSDRLSYKEIEQATEIPAADLKRCLQSLACVKGKNVIKKEPMSKDIGEEDLFVVNDK 629

Query: 363  FTSKLIKVKISTVAATKEGESEKAETRQKVEEDRKPQIEAAIVRIMKARQRLDHNTIITE 542
            FTSK  KVKI TV A KE E EK ETRQ+VEEDRKPQIEAAIVRIMK+R+ LDHN II E
Sbjct: 630  FTSKFYKVKIGTVVAQKETEPEKQETRQRVEEDRKPQIEAAIVRIMKSRKILDHNNIIAE 689

Query: 543  VTRQLQARFVPNPATIKKRIESLIEREFLARDEADRKFYTYVA 671
            VT+QLQ RF+ NP  IKKRIESLIER+FL RD  DRK Y Y+A
Sbjct: 690  VTKQLQPRFLANPTEIKKRIESLIERDFLERDSTDRKLYRYLA 732

>emb|CAC85344.1| cullin 3a [Arabidopsis thaliana]
          Length = 338

 Score =  321 bits (822), Expect = 9e-87
 Identities = 155/223 (69%), Positives = 184/223 (82%)
 Frame = +3

Query: 3   NLPRELEAACESFRNFYLSTHSGRRLTFQPNMGTADLRAVFGAGRRHELNVSTYQMCVLL 182
           NLP E+   CE FR++YL TH+GRRL++Q NMGTAD++A+FG G++HELNVST+QMCVL+
Sbjct: 116 NLPAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADIKAIFGKGQKHELNVSTFQMCVLM 175

Query: 183 LFNEADSLSYRDIAQATEIPAPDLKRALQSLACVKGRNVLRKEPAGKDVADSDVFFYNDK 362
           LFN +D LSY++I QATEIPA DLKR LQSLACVKG+NV++KEP  KD+ + D+F  NDK
Sbjct: 176 LFNNSDRLSYKEIEQATEIPAADLKRCLQSLACVKGKNVIKKEPMSKDIGEEDLFVVNDK 235

Query: 363 FTSKLIKVKISTVAATKEGESEKAETRQKVEEDRKPQIEAAIVRIMKARQRLDHNTIITE 542
           FTSK  KVKI TV A KE E EK ETRQ+VEEDRKPQIEAAIVRIMK+R+ LDHN II E
Sbjct: 236 FTSKFYKVKIGTVVAQKETEPEKQETRQRVEEDRKPQIEAAIVRIMKSRKILDHNNIIAE 295

Query: 543 VTRQLQARFVPNPATIKKRIESLIEREFLARDEADRKFYTYVA 671
           VT+QLQ RF+ NP  IKKRIESLIER+FL RD  DRK Y Y+A
Sbjct: 296 VTKQLQPRFLANPTEIKKRIESLIERDFLERDSTDRKLYRYLA 338

>emb|CAC87839.1| cullin 3B [Arabidopsis thaliana]
          Length = 601

 Score =  320 bits (819), Expect = 2e-86
 Identities = 155/223 (69%), Positives = 183/223 (81%)
 Frame = +3

Query: 3    NLPRELEAACESFRNFYLSTHSGRRLTFQPNMGTADLRAVFGAGRRHELNVSTYQMCVLL 182
            NLP E+   CE FR++YL TH+GRRL++Q NMGTAD++AVFG G++HELNVST+QMCVL+
Sbjct: 379  NLPAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADIKAVFGKGQKHELNVSTFQMCVLM 438

Query: 183  LFNEADSLSYRDIAQATEIPAPDLKRALQSLACVKGRNVLRKEPAGKDVADSDVFFYNDK 362
            LFN +D LSY++I QATEIP PDLKR LQS+ACVKG+NVLRKEP  K++A+ D F  ND+
Sbjct: 439  LFNNSDRLSYKEIEQATEIPTPDLKRCLQSMACVKGKNVLRKEPMSKEIAEEDWFVVNDR 498

Query: 363  FTSKLIKVKISTVAATKEGESEKAETRQKVEEDRKPQIEAAIVRIMKARQRLDHNTIITE 542
            F SK  KVKI TV A KE E EK ETRQ+VEEDRKPQIEAAIVRIMK+R+ LDHN II E
Sbjct: 499  FASKFYKVKIGTVVAQKETEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAE 558

Query: 543  VTRQLQARFVPNPATIKKRIESLIEREFLARDEADRKFYTYVA 671
            VT+QLQ RF+ NP  IKKRIESLIER+FL RD  DRK Y Y+A
Sbjct: 559  VTKQLQTRFLANPTEIKKRIESLIERDFLERDNTDRKLYRYLA 601

>ref|NP_177125.1| E3 ubiquitin ligase SCF complex subunit Cullin, putative [Arabidopsis
            thaliana] gi|25354600|pir||E96718 probable cullin
            T6C23.13 [imported] - Arabidopsis thaliana
            gi|12325193|gb|AAG52544.1|AC013289_11 putative cullin;
            66460-68733 [Arabidopsis thaliana]
          Length = 732

 Score =  320 bits (819), Expect = 2e-86
 Identities = 155/223 (69%), Positives = 183/223 (81%)
 Frame = +3

Query: 3    NLPRELEAACESFRNFYLSTHSGRRLTFQPNMGTADLRAVFGAGRRHELNVSTYQMCVLL 182
            NLP E+   CE FR++YL TH+GRRL++Q NMGTAD++AVFG G++HELNVST+QMCVL+
Sbjct: 510  NLPAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADIKAVFGKGQKHELNVSTFQMCVLM 569

Query: 183  LFNEADSLSYRDIAQATEIPAPDLKRALQSLACVKGRNVLRKEPAGKDVADSDVFFYNDK 362
            LFN +D LSY++I QATEIP PDLKR LQS+ACVKG+NVLRKEP  K++A+ D F  ND+
Sbjct: 570  LFNNSDRLSYKEIEQATEIPTPDLKRCLQSMACVKGKNVLRKEPMSKEIAEEDWFVVNDR 629

Query: 363  FTSKLIKVKISTVAATKEGESEKAETRQKVEEDRKPQIEAAIVRIMKARQRLDHNTIITE 542
            F SK  KVKI TV A KE E EK ETRQ+VEEDRKPQIEAAIVRIMK+R+ LDHN II E
Sbjct: 630  FASKFYKVKIGTVVAQKETEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAE 689

Query: 543  VTRQLQARFVPNPATIKKRIESLIEREFLARDEADRKFYTYVA 671
            VT+QLQ RF+ NP  IKKRIESLIER+FL RD  DRK Y Y+A
Sbjct: 690  VTKQLQTRFLANPTEIKKRIESLIERDFLERDNTDRKLYRYLA 732

EST assemble image

clone accession position 1 HC090f03_r AV638774 1 425 2 LC067f06_r AV623713 107 624 3 LC083b12_r AV624820 232 752 4 LC017b08_r AV620070 248 752

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