Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002159A_C01 KCC002159A_c01
(463 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_200637.1| 26S proteasome AAA-ATPase subunit RPT3 [Arabido... 149 1e-35
sp|P54778|PRS6_SOLTU 26S protease regulatory subunit 6B homolog ... 144 4e-34
sp|P46507|PRS6_MANSE 26S protease regulatory subunit 6B (ATPase ... 140 9e-33
gb|AAH55215.1| Proteasome 26S ATPase subunit 4 isoform 1 [Danio ... 134 4e-31
ref|NP_572686.1| CG16916-PA [Drosophila melanogaster] gi|6434950... 133 1e-30
>ref|NP_200637.1| 26S proteasome AAA-ATPase subunit RPT3 [Arabidopsis thaliana]
gi|28558168|sp|Q9SEI4|PRS6_ARATH 26S protease regulatory
subunit 6B homolog (26S proteasome AAA-ATPase subunit
RPT3) (Regulatory particle triple-A ATPase subunit 3)
gi|6652882|gb|AAF22523.1|AF123392_1 26S proteasome
AAA-ATPase subunit RPT3 [Arabidopsis thaliana]
gi|8777330|dbj|BAA96920.1| 26S proteasome AAA-ATPase
subunit RPT3 [Arabidopsis thaliana]
gi|17979231|gb|AAL49932.1| AT4g10340/F24G24_140
[Arabidopsis thaliana]
Length = 408
Score = 149 bits (377), Expect = 1e-35
Identities = 78/101 (77%), Positives = 92/101 (90%)
Frame = +2
Query: 161 METDAAPALVADTSTSEADEDLYTILKNLQRQLEFLEIQEEYIKEEQKNLKRELLRAQEE 340
++ A+PAL+ D ST++ +EDLY LK+L+RQLEF +IQEEY+K+EQKNLKRELLRAQEE
Sbjct: 11 LDPKASPALM-DLSTAD-EEDLYGRLKSLERQLEFTDIQEEYVKDEQKNLKRELLRAQEE 68
Query: 341 VKRIQSVPLVIGQFLEMVDANNGIVGSTTGSNYYVRILSTL 463
VKRIQSVPLVIGQF+EMVD NNGIVGSTTGSNYYVRILST+
Sbjct: 69 VKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTI 109
>sp|P54778|PRS6_SOLTU 26S protease regulatory subunit 6B homolog gi|7435738|pir||T07110
vacuolar proton-ATPase chain E - potato
gi|1155334|gb|AAB67835.1| POTATP1
Length = 413
Score = 144 bits (364), Expect = 4e-34
Identities = 74/115 (64%), Positives = 89/115 (77%)
Frame = +2
Query: 119 MAAVDVLPPRTGDDMETDAAPALVADTSTSEADEDLYTILKNLQRQLEFLEIQEEYIKEE 298
MA VL P+ + + + D S+ ++DLY LK+LQRQLEF+EIQEEY+K+E
Sbjct: 1 MATAMVLDPKPAEKLPATRPETSITDVP-SDGEDDLYARLKSLQRQLEFIEIQEEYVKDE 59
Query: 299 QKNLKRELLRAQEEVKRIQSVPLVIGQFLEMVDANNGIVGSTTGSNYYVRILSTL 463
KNL+RE LRAQEEVKRIQSVPLVIGQF+EM+D NN IVGSTTGSNYYVRILST+
Sbjct: 60 LKNLRREHLRAQEEVKRIQSVPLVIGQFMEMIDQNNAIVGSTTGSNYYVRILSTI 114
>sp|P46507|PRS6_MANSE 26S protease regulatory subunit 6B (ATPase MS73)
gi|559486|emb|CAA86294.1| DEAD-box ATPase [Manduca
sexta]
Length = 415
Score = 140 bits (352), Expect = 9e-33
Identities = 77/112 (68%), Positives = 85/112 (75%), Gaps = 2/112 (1%)
Frame = +2
Query: 134 VLPPRTGDDMETDAAPALVADTSTSEA--DEDLYTILKNLQRQLEFLEIQEEYIKEEQKN 307
+LP + DD TDA A T + EDLYT K LQR LEFLE+QEEYIK+EQ+N
Sbjct: 7 ILPEK--DDQVTDAKGLPFAGPQTFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRN 64
Query: 308 LKRELLRAQEEVKRIQSVPLVIGQFLEMVDANNGIVGSTTGSNYYVRILSTL 463
LK+E L AQEEVKRIQSVPLVIGQFLE VD N GIVGSTTGSNYYVRILST+
Sbjct: 65 LKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTI 116
>gb|AAH55215.1| Proteasome 26S ATPase subunit 4 isoform 1 [Danio rerio]
Length = 418
Score = 134 bits (338), Expect = 4e-31
Identities = 66/82 (80%), Positives = 74/82 (89%)
Frame = +2
Query: 218 EDLYTILKNLQRQLEFLEIQEEYIKEEQKNLKRELLRAQEEVKRIQSVPLVIGQFLEMVD 397
EDLY+I K LQ++LEFLE+QEEYIK+EQKNLK+E L AQEEVKRIQS+PLVIGQFLE VD
Sbjct: 38 EDLYSIYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVD 97
Query: 398 ANNGIVGSTTGSNYYVRILSTL 463
N IVGSTTGSNYYVRILST+
Sbjct: 98 QNTAIVGSTTGSNYYVRILSTI 119
>ref|NP_572686.1| CG16916-PA [Drosophila melanogaster]
gi|6434950|gb|AAF08387.1|AF145306_1 26S proteasome
regulatory complex subunit p48A [Drosophila
melanogaster] gi|7292602|gb|AAF48001.1| CG16916-PA
[Drosophila melanogaster]
Length = 413
Score = 133 bits (334), Expect = 1e-30
Identities = 69/92 (75%), Positives = 77/92 (83%), Gaps = 1/92 (1%)
Frame = +2
Query: 191 ADTSTSEAD-EDLYTILKNLQRQLEFLEIQEEYIKEEQKNLKRELLRAQEEVKRIQSVPL 367
A +S E D EDLY K LQ+ LEF+E+QEEYIK+EQ+NLK+E L AQEEVKRIQSVPL
Sbjct: 23 AHSSLDELDMEDLYVRYKKLQKTLEFIEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPL 82
Query: 368 VIGQFLEMVDANNGIVGSTTGSNYYVRILSTL 463
VIGQFLE VD N GIVGSTTGSNYYVRILST+
Sbjct: 83 VIGQFLEAVDQNTGIVGSTTGSNYYVRILSTI 114
