Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002151A_C01 KCC002151A_c01
(619 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_492875.2| pre-mRNA splicing SR protein related (68.2 kD) ... 59 6e-08
gb|AAG29834.1|AF308446_1 unknown [Paracoccus pantotrophus] 56 5e-07
pir||T47182 hypothetical protein DKFZp434M1616.1 - human (fragme... 55 6e-07
ref|NP_055987.1| HBxAg transactivated protein 2 [Homo sapiens] g... 55 6e-07
gb|AAK95440.1| EBNA-1 [cercopithicine herpesvirus 15] 42 1e-06
>ref|NP_492875.2| pre-mRNA splicing SR protein related (68.2 kD) (rsr-1)
[Caenorhabditis elegans] gi|19571645|emb|CAB04214.3| C.
elegans RSR-1 protein (corresponding sequence F28D9.1)
[Caenorhabditis elegans]
Length = 601
Score = 58.9 bits (141), Expect = 6e-08
Identities = 62/194 (31%), Positives = 86/194 (43%), Gaps = 12/194 (6%)
Frame = -2
Query: 618 ARLRLPPA-ARSAGWRSAS*SQCAAAAAEARAGGRSRPLRPR-------SPPPPRRPRRC 463
+R + PPA AR SAS S A A++ +S P R R SPP PRR R
Sbjct: 336 SRSKSPPAPARRRRSPSASKSP-PPAPKRAKSRSKSPPARRRRSPSASKSPPAPRRRRSP 394
Query: 462 A-ARPALRCGTAPSARSAAAPAAGSWPPAQ*CSKFPRRSRPARHFRRA-LRPGSALPPR* 289
+ +R P AR +P+A PPA +K +S PA RR+ + S P R
Sbjct: 395 SKSRSPAPKREIPPARRRRSPSASKSPPAPKRAKSRSKSPPAPRRRRSPSQSKSPAPRRR 454
Query: 288 SQPAWQ*QAPHRA*SPSSVQPERP--ARPPEAEHCRSRAPAHPGRPRRPQQRQLR*QPPA 115
P+ QAP R SPS + P R P A R ++P PRR + + +
Sbjct: 455 RSPSKSPQAPRRRRSPSGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSPSSSSRSRS 514
Query: 114 PAPAPQLHDRDRDR 73
P P P+ +D ++
Sbjct: 515 PPPPPRRPRQDSEQ 528
Score = 53.5 bits (127), Expect = 2e-06
Identities = 53/163 (32%), Positives = 68/163 (41%), Gaps = 16/163 (9%)
Frame = -2
Query: 552 AAAAAEARAGG---RSRPLRPRSPPPPRR-----------PRRCAARPALRCGTAPSARS 415
A+ AA A++G R P +SPPP RR P+R +R + AP+ R
Sbjct: 291 ASVAARAKSGSPRRRRSPSASKSPPPARRRRSPSQSKSPAPKRAKSRS--KSPPAPARRR 348
Query: 414 AAAPAAGSWPPAQ*CSKFPRRSRPARHFRRALRPGSALPPR*SQPAWQ*QAPHRA*SPSS 235
+ A+ S PPA +K +S PAR RR S PP AP R SPS
Sbjct: 349 RSPSASKSPPPAPKRAKSRSKSPPAR--RRRSPSASKSPP----------APRRRRSPSK 396
Query: 234 VQPERPAR--PPEAEHCRSRAPAHPGRPRRPQQRQLR*QPPAP 112
+ P R PP A P P+R + R PPAP
Sbjct: 397 SRSPAPKREIPPARRRRSPSASKSPPAPKRAKSRSK--SPPAP 437
Score = 32.7 bits (73), Expect = 4.3
Identities = 49/183 (26%), Positives = 65/183 (34%), Gaps = 25/183 (13%)
Frame = -2
Query: 576 RSAS*SQCAAAAAEARAGGRSRPLRPRSPPPPRRPRRCAARPALRCGTAPSARSAAAPAA 397
R+AS + A G S R RSPP PRR + R R +P R + PA
Sbjct: 188 RNASPGGDGGGGSPAARRGGSAGNRRRSPPRRGSPRRGSPRRDTR--RSPPRRRGSPPAR 245
Query: 396 GSWPPAQ*CSKFPRR--------------SRPARHFRRALRPGSALPPR*SQPAWQ*QAP 259
G + + P R R RH LR + + +P
Sbjct: 246 GGDRRDRREDRRPVRDEKEREEESRRREIERKKRHEEAELRQKAIASVAARAKS---GSP 302
Query: 258 HRA*SPSSVQPERPAR-----------PPEAEHCRSRAPAHPGRPRRPQQRQLR*QPPAP 112
R SPS+ + PAR P+ RS++P P R RR + PPAP
Sbjct: 303 RRRRSPSASKSPPPARRRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSAS-KSPPPAP 361
Query: 111 APA 103
A
Sbjct: 362 KRA 364
>gb|AAG29834.1|AF308446_1 unknown [Paracoccus pantotrophus]
Length = 251
Score = 55.8 bits (133), Expect = 5e-07
Identities = 51/157 (32%), Positives = 67/157 (42%), Gaps = 1/157 (0%)
Frame = -2
Query: 540 AEARAGGRSRPLRPRSPPPPRRPRRCAARPALRCGTAPSARSAAAPAAGSWPPAQ*CSKF 361
+ A A GR+ R P PP R RR ++P+ R +R ++ P +
Sbjct: 103 SRAAAPGRAAASRKNRPKPPWRSRRRVSKPSRR------SRPSSLP------------RR 144
Query: 360 PRRSRPARHFRRALRPGSALPPR*SQPAWQ*QAPHRA*SPSSVQPERPA-RPPEAEHCRS 184
P R P RH RR RPGS LP S P+ + P R +P P +P R P+ R
Sbjct: 145 PHRRTPRRH-RRMRRPGSRLP---SLPSARRPTP-RLLNPPRPTPRKPRPRNPKPSGQRP 199
Query: 183 RAPAHPGRPRRPQQRQLR*QPPAPAPAPQLHDRDRDR 73
+ P HP RRP P P+P P R R R
Sbjct: 200 KRPLHPKPCRRPSPS------PPPSPLPPRPRRTRSR 230
Score = 32.0 bits (71), Expect = 7.4
Identities = 57/179 (31%), Positives = 73/179 (39%), Gaps = 27/179 (15%)
Frame = +1
Query: 106 RSRSRRLLSELALLWSPRPSRVSRGPR---SAMLSLRGPRRALRLH--*TWRSG------ 252
RS R+ A+ PRP+R ++ PR SA+++ RR R R G
Sbjct: 2 RSPGRKTAPRTAM---PRPARAAKAPRTAASAVVAAAPSRRQERRRRGVPCRGGSDHAED 58
Query: 253 ----AVRRLLLPSWLRSAGWESR------PGTQCSP-EMSSRPRS--ARKFRALLSRWPR 393
AV PS L G +R PG + P M +RPRS A RA SR R
Sbjct: 59 GAEDAVSEAEPPSGLPKRGDAARSCPRSWPGPRMRPNRMPNRPRSRAAAPGRAAASRKNR 118
Query: 394 SR-SWSGC*PS*RSCTAAERRARSAPARSPRGRGRARPKRPR--STASSRLSSCSGALR 561
+ W S R + RR+R P+ PR R P+R R SRL S A R
Sbjct: 119 PKPPWR----SRRRVSKPSRRSR--PSSLPRRPHRRTPRRHRRMRRPGSRLPSLPSARR 171
>pir||T47182 hypothetical protein DKFZp434M1616.1 - human (fragment)
gi|7328030|emb|CAB82345.1| hypothetical protein [Homo
sapiens]
Length = 1299
Score = 55.5 bits (132), Expect = 6e-07
Identities = 53/177 (29%), Positives = 85/177 (47%), Gaps = 11/177 (6%)
Frame = -1
Query: 520 SIAASSAALAPAPAATSPVRCAPGAPLRYSSFSSVSSRSSCGI----LATCSVMLEISAP 353
S+ AS++A P PA +PV + AP+ S+ + V + +S + LA S +SA
Sbjct: 308 SVPASTSA--PLPATLTPVPASTSAPVPASTLAPVLASTSAPVPASPLAPVSASASVSAS 365
Query: 352 IAACSTFPASTAS----RVCSPTPL---ISTSLAITGAAPRLIAKFSAA*APCAAP*G*A 194
+ A ++ A T+S +PTP+ +ST ++T A I ++A A +AP A
Sbjct: 366 VPASTSAAAITSSSAPASAPAPTPILASVSTPASVTILASASIPILASALASTSAP-TPA 424
Query: 193 LPIAGPCSPWTASATTAAPAPIAASCSCSCSTAPRPRPRPRPRMPAAPRPRSIAATK 23
+ P +P + T A AP AS + ++A P P P P P P + A T+
Sbjct: 425 PAASSPAAPVITAPTIPASAP-TASVPLAPASASAPAPAPTPVSAPNPAPPAPAQTQ 480
Score = 50.1 bits (118), Expect = 3e-05
Identities = 52/176 (29%), Positives = 78/176 (43%), Gaps = 8/176 (4%)
Frame = -1
Query: 517 IAASSAALAPAPAATSPVRC----APG-APLRYSSFSSVSSRSSCGILATCSVMLEISAP 353
++AS++ A PA+TS AP AP +SVS+ +S ILA+ S+ + SA
Sbjct: 356 VSASASVSASVPASTSAAAITSSSAPASAPAPTPILASVSTPASVTILASASIPILASAL 415
Query: 352 IAACSTFPASTASRVCSPTPLISTSLAITGAAPRLIAKFSAA*APCAAP*G*ALPIAGPC 173
+ + PA AS +P T A A +A SA+ AP AP + P P
Sbjct: 416 ASTSAPTPAPAASSPAAPVITAPTIPASAPTASVPLAPASAS-APAPAPTPVSAPNPAPP 474
Query: 172 SPWTASATTAAPAPIAASCSCSCSTAPRPRPRPRPRMPAAPRPRS---IAATKGLE 14
+P A T PA + S +P P R+P+A P +A+ K ++
Sbjct: 475 APAQTQAQTHKPAQNPLQTTSQSSK----QPPPSIRLPSAQTPNGTDYVASGKSIQ 526
>ref|NP_055987.1| HBxAg transactivated protein 2 [Homo sapiens]
gi|5541863|emb|CAB51071.1| hypothetical protein [Homo
sapiens] gi|28629137|gb|AAO49478.1| HBxAg transactivated
protein 2 [Homo sapiens]
Length = 2701
Score = 55.5 bits (132), Expect = 6e-07
Identities = 53/177 (29%), Positives = 85/177 (47%), Gaps = 11/177 (6%)
Frame = -1
Query: 520 SIAASSAALAPAPAATSPVRCAPGAPLRYSSFSSVSSRSSCGI----LATCSVMLEISAP 353
S+ AS++A P PA +PV + AP+ S+ + V + +S + LA S +SA
Sbjct: 1761 SVPASTSA--PLPATLTPVPASTSAPVPASTLAPVLASTSAPVPASPLAPVSASASVSAS 1818
Query: 352 IAACSTFPASTAS----RVCSPTPL---ISTSLAITGAAPRLIAKFSAA*APCAAP*G*A 194
+ A ++ A T+S +PTP+ +ST ++T A I ++A A +AP A
Sbjct: 1819 VPASTSAAAITSSSAPASAPAPTPILASVSTPASVTILASASIPILASALASTSAP-TPA 1877
Query: 193 LPIAGPCSPWTASATTAAPAPIAASCSCSCSTAPRPRPRPRPRMPAAPRPRSIAATK 23
+ P +P + T A AP AS + ++A P P P P P P + A T+
Sbjct: 1878 PAASSPAAPVITAPTIPASAP-TASVPLAPASASAPAPAPTPVSAPNPAPPAPAQTQ 1933
Score = 48.9 bits (115), Expect = 6e-05
Identities = 56/201 (27%), Positives = 81/201 (39%), Gaps = 32/201 (15%)
Frame = -1
Query: 520 SIAASSAALAPAPAATS-PVRCAPGAPLRYSSFSSVSSRSSCGILATCSVMLEISAP--- 353
S ++ LAP A+TS PV +P AP+ S+ S S +S A S SAP
Sbjct: 1782 SAPVPASTLAPVLASTSAPVPASPLAPVSASASVSASVPASTSAAAITSSSAPASAPAPT 1841
Query: 352 -IAACSTFPASTASRVCSPTPLISTSLAITGAAPRLIAKFSAA*APCAAP*G*ALPIAGP 176
I A + PAS + P+++++LA T A A S A AP +P + P
Sbjct: 1842 PILASVSTPASVTILASASIPILASALASTSAPTPAPAASSPAAPVITAP---TIPASAP 1898
Query: 175 -CSPWTASATTAAPAPIAASCSCSCSTAPRP-----------------------RPRPRP 68
S A A+ +APAP S P P +P P
Sbjct: 1899 TASVPLAPASASAPAPAPTPVSAPNPAPPAPAQTQAQTHKPVQNPLQTTSQSSKQPPPSI 1958
Query: 67 RMPAAPRPRS---IAATKGLE 14
R+P+A P +A+ K ++
Sbjct: 1959 RLPSAQTPNGTDYVASGKSIQ 1979
>gb|AAK95440.1| EBNA-1 [cercopithicine herpesvirus 15]
Length = 511
Score = 42.4 bits (98), Expect(2) = 1e-06
Identities = 46/152 (30%), Positives = 54/152 (35%), Gaps = 2/152 (1%)
Frame = +2
Query: 74 RSRSRSWSCGAGAGAGGCYRSWRCCGRRGRPG*AGARDRQCSASGGRAGRSGCTELGDQA 253
R + R G G GG RG G R SGG G +G + LG A
Sbjct: 79 RDKKRRSCVGCKGGTGGSSAGGAGGNSRGGGGAGVGSGRGAGGSGGAGGGAGGS-LGGGA 137
Query: 254 RCGACYCQAG*DQRGGRADPGRSARRKCRAGRDRRGNFEHY*AGGQDPAAGAAADRAEGA 433
+ AG GG G A GR R G+ AGG+ G + G
Sbjct: 138 GGSSGGSGAGGSGAGGSGAGGSGAGGSRGRGRGRGGS-----AGGRGGRGGGGGGGSRGR 192
Query: 434 VPQRSAGRAAHRRGR-RG-GGGERGRRGRDRP 523
R G RGR RG G GE +G RP
Sbjct: 193 GRGRGGGSRGRGRGRGRGRGRGEGPSKGEKRP 224
Score = 40.4 bits (93), Expect(2) = 2e-04
Identities = 47/159 (29%), Positives = 51/159 (31%), Gaps = 9/159 (5%)
Frame = +2
Query: 71 SRSRSRSWSCGAGAGAGGCYRSWRCCGRRGRPG*A----GARD---RQCSASGGRAGRSG 229
+ R R G G G GG G G G RD R C G G S
Sbjct: 38 AHGRGRGRGRGRGRGGGGVLGETGEFGGHGSESETRHGNGHRDKKRRSCVGCKGGTGGSS 97
Query: 230 CTELGDQARCGACYCQAG*DQRGGRADPGRSARRKCRAGRDRRGNFEHY*AGGQDPAAGA 409
G +R G GG G A G G+ AGG
Sbjct: 98 AGGAGGNSRGGGGAGVGSGRGAGGSGGAGGGAGGSLGGGAG--GSSGGSGAGGSGAGGSG 155
Query: 410 AADRAEGAVPQRSAGR--AAHRRGRRGGGGERGRRGRDR 520
A G R GR +A RG RGGGG G RGR R
Sbjct: 156 AGGSGAGGSRGRGRGRGGSAGGRGGRGGGGGGGSRGRGR 194
Score = 31.6 bits (70), Expect(2) = 1e-06
Identities = 16/19 (84%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Frame = +3
Query: 42 RGRGAAGI-RGRGRGRGRG 95
RGRGA G RGRGRGRGRG
Sbjct: 34 RGRGAHGRGRGRGRGRGRG 52
Score = 26.2 bits (56), Expect(2) = 2e-04
Identities = 13/20 (65%), Positives = 14/20 (70%), Gaps = 3/20 (15%)
Frame = +3
Query: 45 GRGAAGIRGRG---RGRGRG 95
G G+ G RGRG RGRGRG
Sbjct: 27 GSGSGGNRGRGAHGRGRGRG 46
