Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002143A_C01 KCC002143A_c01
(642 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAE17915.1| Hypothetical protein R13H4.8 [Caenorhabditis ele... 55 1e-06
ref|NP_494943.1| putative secreted or extracellular protein prec... 55 1e-06
ref|NP_496274.1| putative protein (15.6 kD) (2K854) [Caenorhabdi... 54 3e-06
ref|XP_150039.1| hypothetical protein XP_150039 [Mus musculus] 54 3e-06
ref|NP_494944.1| putative protein (2F393) [Caenorhabditis elegan... 52 6e-06
>emb|CAE17915.1| Hypothetical protein R13H4.8 [Caenorhabditis elegans]
Length = 212
Score = 54.7 bits (130), Expect = 1e-06
Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -2
Query: 518 CARACACACCR-RCCCTRYACCRCCASAICCTCCCCFW*RCSTC 390
C C C CCR RCCC CC CC + C CC C C C
Sbjct: 80 CGCGCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGC 123
Score = 52.0 bits (123), Expect = 7e-06
Identities = 24/50 (48%), Positives = 25/50 (50%)
Frame = -2
Query: 518 CARACACACCRRCCCTRYACCRCCASAICCTCCCCFW*RCSTCFWYSRRR 369
C R C C CCR CCCTR CC CC CC C C C C R+R
Sbjct: 96 CCRRC-CTCCRTCCCTR--CCTCCRPC-CCGCGCGCGCGCCGCGGGGRKR 141
Score = 47.0 bits (110), Expect = 2e-04
Identities = 22/43 (51%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = -2
Query: 506 CACACCR-RCCCTRYACCRCCASAICCTC---CCCFW*RCSTC 390
C C C CCC R CC CC CCTC CCC RC TC
Sbjct: 77 CGCCGCGCGCCCCRPRCCCCCRR--CCTCCRTCCCT--RCCTC 115
Score = 42.0 bits (97), Expect = 0.008
Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = -2
Query: 524 RPCARACACACCRRCCCTRYACCR--CCASAICCTCCCC 414
R C C CC RCC CCR CC C C CC
Sbjct: 98 RRCCTCCRTCCCTRCC----TCCRPCCCGCGCGCGCGCC 132
>ref|NP_494943.1| putative secreted or extracellular protein precursor (2F392)
[Caenorhabditis elegans]
gi|14573761|gb|AAK68161.1|U55854_9 Hypothetical protein
C04G6.7 [Caenorhabditis elegans]
Length = 197
Score = 54.7 bits (130), Expect = 1e-06
Identities = 22/45 (48%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -2
Query: 518 CARACACACCRRCCCTRYACCRCCASAICCTCC--CCFW*RCSTC 390
C R C CCRRCC CCR C CCTCC CC C C
Sbjct: 88 CCRPRCCCCCRRCC----TCCRTCCCTRCCTCCRPCCCGCGCGCC 128
Score = 50.4 bits (119), Expect = 2e-05
Identities = 20/36 (55%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 518 CARACACACCRRCCCTRYA-CCRCCASAICCTCCCC 414
C R C C CCR CCCTR CCR C C CC C
Sbjct: 96 CCRRC-CTCCRTCCCTRCCTCCRPCCCGCGCGCCGC 130
Score = 35.4 bits (80), Expect = 0.71
Identities = 21/56 (37%), Positives = 23/56 (40%)
Frame = -2
Query: 557 SSRT*LVTAYTRPCARACACACCRRCCCTRYACCRCCASAICCTCCCCFW*RCSTC 390
SS T + T + R C CC C C CC C C CCCC RC C
Sbjct: 46 SSETSIDTLGSSRVKRQGGCGCCG-CGC---GCCGCGGGGGGCGCCCC-RPRCCCC 96
>ref|NP_496274.1| putative protein (15.6 kD) (2K854) [Caenorhabditis elegans]
gi|7495472|pir||T18975 hypothetical protein C06A1.6 -
Caenorhabditis elegans gi|3874010|emb|CAA90055.1|
Hypothetical protein C06A1.6 [Caenorhabditis elegans]
Length = 152
Score = 53.5 bits (127), Expect = 3e-06
Identities = 20/38 (52%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -2
Query: 518 CARACACACCRRCCCTRYACCRCCASAIC---CTCCCC 414
C C C CCR CCCTR CC CC C C C CC
Sbjct: 82 CRPKCCCTCCRTCCCTR--CCTCCRPCCCGCGCGCGCC 117
Score = 52.0 bits (123), Expect = 7e-06
Identities = 21/38 (55%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = -2
Query: 518 CARACACACCR-RCCCTRYACCRCCASAICCTCC--CC 414
C R C CCR +CCCT CCR C CCTCC CC
Sbjct: 73 CCRPRCCCCCRPKCCCT---CCRTCCCTRCCTCCRPCC 107
Score = 48.5 bits (114), Expect = 8e-05
Identities = 20/42 (47%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = -2
Query: 506 CACACCRR--CCCTRYACCRCCASAICCT-CCCCFW*RCSTC 390
C C CCR CCC R CC C CCT CC C C C
Sbjct: 69 CGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRPCCCGC 110
>ref|XP_150039.1| hypothetical protein XP_150039 [Mus musculus]
Length = 247
Score = 53.5 bits (127), Expect = 3e-06
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -2
Query: 518 CARACAC--ACCRRCCCTRYACCRCCASAICCTCCCCFW*RCSTCFWYSR 375
C + C C +CC+ CCC C CC + CC CCC C C ++R
Sbjct: 161 CCKPCCCQSSCCKPCCCQSSCCKPCCCQSSCCKPCCCQSSCCKPCCCHAR 210
Score = 49.3 bits (116), Expect = 5e-05
Identities = 18/51 (35%), Positives = 23/51 (44%), Gaps = 6/51 (11%)
Frame = -2
Query: 524 RPCARA------CACACCRRCCCTRYACCRCCASAICCTCCCCFW*RCSTC 390
+PC + C +CC+ CCC C CC + CC CCC C C
Sbjct: 145 KPCCSSGCGSSCCQSSCCKPCCCQSSCCKPCCCQSSCCKPCCCQSSCCKPC 195
Score = 47.8 bits (112), Expect = 1e-04
Identities = 19/53 (35%), Positives = 26/53 (48%), Gaps = 10/53 (18%)
Frame = -2
Query: 518 CARACAC--ACCRRCC-------CTRYACCR-CCASAICCTCCCCFW*RCSTC 390
C + C C +CC+ CC C + +CC+ CC + CC CCC C C
Sbjct: 133 CCKPCCCQSSCCKPCCSSGCGSSCCQSSCCKPCCCQSSCCKPCCCQSSCCKPC 185
Score = 43.9 bits (102), Expect = 0.002
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 14/59 (23%)
Frame = -2
Query: 524 RPCARA------CACACCRRCCCTRYACCRCCAS--------AICCTCCCCFW*RCSTC 390
+PC + C +CC+ CCC C CC+S + CC CCC C C
Sbjct: 117 KPCCSSGCGSSCCQSSCCKPCCCQSSCCKPCCSSGCGSSCCQSSCCKPCCCQSSCCKPC 175
Score = 43.5 bits (101), Expect = 0.003
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 8/47 (17%)
Frame = -2
Query: 506 CACACCRRCCCTRYACCRCCAS--------AICCTCCCCFW*RCSTC 390
C +CC+ CCC C CC+S + CC CCC C C
Sbjct: 101 CQSSCCKPCCCQSSCCKPCCSSGCGSSCCQSSCCKPCCCQSSCCKPC 147
Score = 42.7 bits (99), Expect = 0.004
Identities = 16/44 (36%), Positives = 23/44 (51%), Gaps = 10/44 (22%)
Frame = -2
Query: 518 CARACAC--ACCRRCC-------CTRYACCR-CCASAICCTCCC 417
C + C C +CC+ CC C + +CC+ CC + CC CC
Sbjct: 105 CCKPCCCQSSCCKPCCSSGCGSSCCQSSCCKPCCCQSSCCKPCC 148
Score = 37.7 bits (86), Expect = 0.14
Identities = 12/34 (35%), Positives = 15/34 (43%)
Frame = -2
Query: 518 CARACACACCRRCCCTRYACCRCCASAICCTCCC 417
C +C C+ CC C CC + CC CC
Sbjct: 87 CGGCGSCGGCKPSCCQSSCCKPCCCQSSCCKPCC 120
>ref|NP_494944.1| putative protein (2F393) [Caenorhabditis elegans]
gi|14573757|gb|AAK68158.1|U55854_2 Hypothetical protein
C04G6.10 [Caenorhabditis elegans]
Length = 166
Score = 52.4 bits (124), Expect = 6e-06
Identities = 19/40 (47%), Positives = 20/40 (49%), Gaps = 1/40 (2%)
Frame = -2
Query: 506 CACACCR-RCCCTRYACCRCCASAICCTCCCCFW*RCSTC 390
C C CCR RCCC CC CC + C CC C C C
Sbjct: 83 CGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGC 122
Score = 52.0 bits (123), Expect = 7e-06
Identities = 20/37 (54%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 518 CARACACACCRRCCCTRYACCRCCASAICCTCC--CC 414
C R C CCRRCC CCR C CCTCC CC
Sbjct: 87 CCRPRCCCCCRRCC----TCCRTCCCTRCCTCCRPCC 119
Score = 52.0 bits (123), Expect = 7e-06
Identities = 21/38 (55%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = -2
Query: 518 CARACACACCRRCCCTRYACCRCCASAIC---CTCCCC 414
C R C C CCR CCCTR CC CC C C C CC
Sbjct: 95 CCRRC-CTCCRTCCCTR--CCTCCRPCCCGCGCGCGCC 129
Score = 45.4 bits (106), Expect = 7e-04
Identities = 18/36 (50%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 518 CARACACACCRRCCCTRYACC-RCCASAICCTCCCC 414
C C C C R C C R CC RCC CC CCC
Sbjct: 88 CRPRCCCCCRRCCTCCRTCCCTRCCT---CCRPCCC 120
Score = 36.2 bits (82), Expect = 0.42
Identities = 24/71 (33%), Positives = 28/71 (38%)
Frame = -2
Query: 602 SKD*SAVRMVRHIERSSRT*LVTAYTRPCARACACACCRRCCCTRYACCRCCASAICCTC 423
S + + VR SS T + T + R C CC C C CC C C C
Sbjct: 30 STEVALVRSSASTTSSSETSIDTLGSSRVKRQGGCGCCG-CGC---GCCGCGGGGGGCGC 85
Query: 422 CCCFW*RCSTC 390
CCC RC C
Sbjct: 86 CCC-RPRCCCC 95
