KCC002137A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002137A_C01 KCC002137A_c01
cgagctgcgcgaggagctgcggttgcaggtgggcccaaggtttgcagggcagcaacggct
gacggagctgcctgagatccACCAGTTCCTGGACGGCTTCTATCTCAGCCGCATTGGCAT
CCGCATCCTCATCGGCCAGCACATTGCGCTGCATGAGCCGTCCAAGCCCAACCACATCGG
CCTCATCTGCACCAAGTGCAGTCCGGTGCTAGTGGCGCAGGACGCCATCAACGACGCACG
CAGCATCTGCATGCGCGAGTACGGAGACGCGCCCGAGGTGTCTGTTTACGGCAGCCCGGA
CTTTGTGTTCCCTTACGTGCCCAGCCACCTGCACCACATGCTGTTTGAGCTGGTCAAGAA
CAGTTTGAGGGCGGTGCAGGACCGGTTCGCAGACAGCGACGACGCAGCGCCGCCCATTAG
GCTGGTTGTGGCGGAGGGCGGTGAGGACGTGACGTTGAAGGTGTCAGACGAAGGAGGCGG
CATTCCGCGCTCGGGCCTGGCCAACATCTGGACCTACCTCTACTCCACAGCCAAAAGCCC
TGTGGACCCGCGTC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002137A_C01 KCC002137A_c01
         (554 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAK01947.1| pyruvate dehydrogenase kinase 1 [Oryza sativa sub...   234  6e-61
gb|AAG46146.1|AC082644_28 putative pyruvate dehydrogenase kinase...   233  1e-60
gb|AAC97601.1| pyruvate dehydrogenase kinase [Arabidopsis thalia...   233  1e-60
gb|AAC63961.1| pyruvate dehydrogenase kinase isoform 1; PDK1 [Ze...   231  4e-60
pir||T51626 [pyruvate dehydrogenase (lipoamide)] kinase (EC 2.7....   230  1e-59

>gb|AAK01947.1| pyruvate dehydrogenase kinase 1 [Oryza sativa subsp. indica]
           gi|23237829|dbj|BAC16404.1| pyruvate dehydrogenase
           kinase 1 [Oryza sativa (japonica cultivar-group)]
          Length = 363

 Score =  234 bits (597), Expect = 6e-61
 Identities = 113/163 (69%), Positives = 134/163 (81%), Gaps = 1/163 (0%)
 Frame = +2

Query: 62  TELPEIHQFLDGFYLSRIGIRILIGQHIALHEPS-KPNHIGLICTKCSPVLVAQDAINDA 238
           T   EIH+FLD FY+SRIGIR+LIGQH+ALH+P  +P  IGLI T+ SP+ VAQ A  DA
Sbjct: 143 TAFDEIHEFLDRFYMSRIGIRMLIGQHVALHDPDPEPGVIGLINTELSPIQVAQAASEDA 202

Query: 239 RSICMREYGDAPEVSVYGSPDFVFPYVPSHLHHMLFELVKNSLRAVQDRFADSDDAAPPI 418
           RSIC+REYG APE+ +YG P F FPYV SHLH MLFELVKNSLRAVQ+R+ +SD   PP+
Sbjct: 203 RSICLREYGSAPEIDIYGDPTFTFPYVSSHLHLMLFELVKNSLRAVQERYMNSDKDVPPV 262

Query: 419 RLVVAEGGEDVTLKVSDEGGGIPRSGLANIWTYLYSTAKSPVD 547
           R++VA+G EDVT+KVSDEGGGIPRSGL  I+TYLYSTAK+P D
Sbjct: 263 RIIVADGAEDVTIKVSDEGGGIPRSGLPRIFTYLYSTAKNPPD 305

>gb|AAG46146.1|AC082644_28 putative pyruvate dehydrogenase kinase [Oryza sativa]
          Length = 365

 Score =  233 bits (595), Expect = 1e-60
 Identities = 111/161 (68%), Positives = 136/161 (83%), Gaps = 1/161 (0%)
 Frame = +2

Query: 68  LPEIHQFLDGFYLSRIGIRILIGQHIALHEPS-KPNHIGLICTKCSPVLVAQDAINDARS 244
           + EIHQFLD FY+SRIGIR+LIGQH+ALHEP  +P  IGLI  + SP+LVAQ A  DAR+
Sbjct: 147 IDEIHQFLDRFYMSRIGIRMLIGQHVALHEPDPEPGVIGLISKRLSPMLVAQHATEDARA 206

Query: 245 ICMREYGDAPEVSVYGSPDFVFPYVPSHLHHMLFELVKNSLRAVQDRFADSDDAAPPIRL 424
           ICMREYG AP+V++YG PDF FPYV  HL  M+FELVKNSLRAVQ+R+ +SD  APP+R+
Sbjct: 207 ICMREYGSAPDVNIYGDPDFTFPYVKLHLQLMMFELVKNSLRAVQERYMNSDKHAPPVRI 266

Query: 425 VVAEGGEDVTLKVSDEGGGIPRSGLANIWTYLYSTAKSPVD 547
           +VA+G EDVT+K+SDEGGGIPRSGL+ I+TYLYSTA++P D
Sbjct: 267 IVADGAEDVTIKISDEGGGIPRSGLSRIFTYLYSTAENPPD 307

>gb|AAC97601.1| pyruvate dehydrogenase kinase [Arabidopsis thaliana]
           gi|14334688|gb|AAK59522.1| putative pyruvate
           dehydrogenase kinase [Arabidopsis thaliana]
           gi|16323390|gb|AAL15189.1| putative pyruvate
           dehydrogenase kinase [Arabidopsis thaliana]
          Length = 366

 Score =  233 bits (595), Expect = 1e-60
 Identities = 112/161 (69%), Positives = 135/161 (83%), Gaps = 1/161 (0%)
 Frame = +2

Query: 68  LPEIHQFLDGFYLSRIGIRILIGQHIALHEPSKPNH-IGLICTKCSPVLVAQDAINDARS 244
           L EIHQFLD FYLSRIGIR+LIGQH+ LH P+ P H +G I TK SP+ VA++A  DARS
Sbjct: 144 LDEIHQFLDRFYLSRIGIRMLIGQHVELHNPNPPLHTVGYIHTKMSPMEVARNASEDARS 203

Query: 245 ICMREYGDAPEVSVYGSPDFVFPYVPSHLHHMLFELVKNSLRAVQDRFADSDDAAPPIRL 424
           IC REYG APE+++YG P F FPYVP+HLH M++ELVKNSLRAVQ+RF DSD  APPIR+
Sbjct: 204 ICFREYGSAPEINIYGDPSFTFPYVPTHLHLMMYELVKNSLRAVQERFVDSDRVAPPIRI 263

Query: 425 VVAEGGEDVTLKVSDEGGGIPRSGLANIWTYLYSTAKSPVD 547
           +VA+G EDVT+KVSDEGGGI RSGL  I+TYLYSTA++P++
Sbjct: 264 IVADGIEDVTIKVSDEGGGIARSGLPRIFTYLYSTARNPLE 304

>gb|AAC63961.1| pyruvate dehydrogenase kinase isoform 1; PDK1 [Zea mays]
          Length = 363

 Score =  231 bits (590), Expect = 4e-60
 Identities = 110/159 (69%), Positives = 134/159 (84%), Gaps = 1/159 (0%)
 Frame = +2

Query: 74  EIHQFLDGFYLSRIGIRILIGQHIALHEPS-KPNHIGLICTKCSPVLVAQDAINDARSIC 250
           EIHQFLD FY+SRIGIR+LIGQH+ALH+P  +P  IGLI TK SP+ VA+ A  DAR+IC
Sbjct: 147 EIHQFLDRFYMSRIGIRMLIGQHVALHDPDPEPGVIGLINTKMSPMTVARIASEDARAIC 206

Query: 251 MREYGDAPEVSVYGSPDFVFPYVPSHLHHMLFELVKNSLRAVQDRFADSDDAAPPIRLVV 430
           MREYG +P+V +YG P F FPYV  HLH M+FELVKNSLRAVQ+R+ DSD  APP+R++V
Sbjct: 207 MREYGSSPDVDIYGDPGFTFPYVTPHLHLMIFELVKNSLRAVQERYMDSDKLAPPVRIIV 266

Query: 431 AEGGEDVTLKVSDEGGGIPRSGLANIWTYLYSTAKSPVD 547
           A+G EDVT+K+SDEGGGIPRSGL+ I+TYLYSTA++P D
Sbjct: 267 ADGAEDVTIKISDEGGGIPRSGLSRIFTYLYSTAENPPD 305

>pir||T51626 [pyruvate dehydrogenase (lipoamide)] kinase (EC 2.7.1.99)
           [validated] - Arabidopsis thaliana
           gi|3641834|emb|CAA07447.1| pyruvate dehydrogenase kinase
           [Arabidopsis thaliana]
          Length = 366

 Score =  230 bits (586), Expect = 1e-59
 Identities = 111/161 (68%), Positives = 134/161 (82%), Gaps = 1/161 (0%)
 Frame = +2

Query: 68  LPEIHQFLDGFYLSRIGIRILIGQHIALHEPSKPNH-IGLICTKCSPVLVAQDAINDARS 244
           L EIHQFLD FYLSRIGIR+LIGQH+ LH P+ P H +G I TK SP+ VA++A  DARS
Sbjct: 144 LDEIHQFLDRFYLSRIGIRMLIGQHVELHNPNPPLHTVGYIHTKMSPMEVARNASEDARS 203

Query: 245 ICMREYGDAPEVSVYGSPDFVFPYVPSHLHHMLFELVKNSLRAVQDRFADSDDAAPPIRL 424
           IC REYG APE+++YG P F FPYVP+HL  M++ELVKNSLRAVQ+RF DSD  APPIR+
Sbjct: 204 ICFREYGSAPEINIYGDPSFTFPYVPTHLDLMMYELVKNSLRAVQERFVDSDRVAPPIRI 263

Query: 425 VVAEGGEDVTLKVSDEGGGIPRSGLANIWTYLYSTAKSPVD 547
           +VA+G EDVT+KVSDEGGGI RSGL  I+TYLYSTA++P++
Sbjct: 264 IVADGIEDVTIKVSDEGGGIARSGLPRIFTYLYSTARNPLE 304



EST assemble image


clone accession position
1 LC088f11_r AV625163 1 497
2 HC083b11_r AV638201 120 554




Chlamydomonas reinhardtii
Kazusa DNA Research Institute