Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002132A_C01 KCC002132A_c01
(557 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD55571.1|AF110789_1 unknown [Volvox carteri f. nagariensis] 189 2e-47
ref|NP_565327.1| expressed protein [Arabidopsis thaliana] gi|254... 99 5e-20
gb|AAM62834.1| unknown [Arabidopsis thaliana] 99 5e-20
ref|NP_440709.1| unknown protein [Synechocystis sp. PCC 6803] gi... 75 5e-13
ref|XP_293372.2| similar to Ser/Arg-related nuclear matrix prote... 43 0.003
>gb|AAD55571.1|AF110789_1 unknown [Volvox carteri f. nagariensis]
Length = 144
Score = 189 bits (481), Expect = 2e-47
Identities = 99/143 (69%), Positives = 115/143 (80%), Gaps = 2/143 (1%)
Frame = +1
Query: 85 MLASKPVVGVRVRSSTASTVARANIRSLAVSSRVALSG--GVCQVPTSVVAPAPKSTQST 258
++A + V VR S A +++R+ RS+AVSSR+ALS Q +S+ APK ++
Sbjct: 2 LVAKRNAVQVRASGSAALSMSRSAARSVAVSSRIALSSWDDCRQTASSLAQSAPKLQNTS 61
Query: 259 NAPRRKPVTMMGNKATTGPFAPLVIVVRGAMGEKPFNNFRGKAISYHSQIIKDFCKLLGV 438
NAPRRKPVTMMGNKATTGPFAPLV+VVRGA+GEK FN FRGKAIS HSQ+IKDFCKLLGV
Sbjct: 62 NAPRRKPVTMMGNKATTGPFAPLVVVVRGAIGEKEFNQFRGKAISLHSQVIKDFCKLLGV 121
Query: 439 DNKQVQGVIRLAKKNGEKLGFLA 507
DNKQVQGVIRLAKKNGEKLGFLA
Sbjct: 122 DNKQVQGVIRLAKKNGEKLGFLA 144
>ref|NP_565327.1| expressed protein [Arabidopsis thaliana] gi|25411183|pir||G84470
hypothetical protein At2g05620 [imported] - Arabidopsis
thaliana gi|4581163|gb|AAD24646.1| expressed protein
[Arabidopsis thaliana]
gi|14030727|gb|AAK53038.1|AF375454_1 At2g05620/T20G20.3
[Arabidopsis thaliana] gi|16974535|gb|AAL31177.1|
At2g05620/T20G20.3 [Arabidopsis thaliana]
Length = 133
Score = 98.6 bits (244), Expect = 5e-20
Identities = 52/97 (53%), Positives = 66/97 (67%)
Frame = +1
Query: 217 TSVVAPAPKSTQSTNAPRRKPVTMMGNKATTGPFAPLVIVVRGAMGEKPFNNFRGKAISY 396
+ VAP ++ S A R P+ N+ G FAPLV+V R +G+K FN RGKAI+
Sbjct: 38 SKTVAPPQQARVSRKAIRAVPMMKNVNEGK-GLFAPLVVVTRNLVGKKRFNQLRGKAIAL 96
Query: 397 HSQIIKDFCKLLGVDNKQVQGVIRLAKKNGEKLGFLA 507
HSQ+I +FCK +G D KQ QG+IRLAKKNGE+LGFLA
Sbjct: 97 HSQVITEFCKSIGADAKQRQGLIRLAKKNGERLGFLA 133
>gb|AAM62834.1| unknown [Arabidopsis thaliana]
Length = 133
Score = 98.6 bits (244), Expect = 5e-20
Identities = 52/97 (53%), Positives = 66/97 (67%)
Frame = +1
Query: 217 TSVVAPAPKSTQSTNAPRRKPVTMMGNKATTGPFAPLVIVVRGAMGEKPFNNFRGKAISY 396
+ VAP ++ S A R P+ N+ G FAPLV+V R +G+K FN RGKAI+
Sbjct: 38 SKTVAPPQQARVSRKAIRAVPMMKNVNEGK-GLFAPLVVVTRNLVGKKRFNQLRGKAIAL 96
Query: 397 HSQIIKDFCKLLGVDNKQVQGVIRLAKKNGEKLGFLA 507
HSQ+I +FCK +G D KQ QG+IRLAKKNGE+LGFLA
Sbjct: 97 HSQVITEFCKSIGADAKQRQGLIRLAKKNGERLGFLA 133
>ref|NP_440709.1| unknown protein [Synechocystis sp. PCC 6803] gi|7470670|pir||S77542
hypothetical protein ssr2016 - Synechocystis sp. (strain
PCC 6803) gi|1652467|dbj|BAA17389.1|
ORF_ID:ssr2016~unknown protein [Synechocystis sp. PCC
6803]
Length = 65
Score = 75.5 bits (184), Expect = 5e-13
Identities = 36/64 (56%), Positives = 46/64 (71%)
Frame = +1
Query: 316 FAPLVIVVRGAMGEKPFNNFRGKAISYHSQIIKDFCKLLGVDNKQVQGVIRLAKKNGEKL 495
FAP+VI+VR +G+ FN RGKAI+ H Q I +FC +G+D KQ Q +IRLAK NG+ L
Sbjct: 2 FAPIVILVRQQLGKAKFNQIRGKAIALHCQTITNFCNRVGIDAKQRQNLIRLAKSNGKTL 61
Query: 496 GFLA 507
G LA
Sbjct: 62 GLLA 65
>ref|XP_293372.2| similar to Ser/Arg-related nuclear matrix protein (plenty of
prolines 101-l; Ser/Arg-related nuclear matrix protein
(plenty of prolines 101-like) [Homo sapiens]
Length = 429
Score = 43.1 bits (100), Expect = 0.003
Identities = 40/116 (34%), Positives = 50/116 (42%), Gaps = 4/116 (3%)
Frame = +2
Query: 92 PPSPLLASACAAPPPRRWLAPTSA---RWRSPRAWRC-PAVCARCRPRSSRPLPSPPSLP 259
PP+ S APPPR +PT R SP + RC P+ P R PSPP
Sbjct: 302 PPTRRRWSLSPAPPPRGHSSPTPPPRKRTPSPPSHRCSPSPRRYSPPIQRRYSPSPPP-K 360
Query: 260 TRPAASL*R*WATRLPLAPSRLWSSLFAVPWARSHSTTSAARPSLTTRRLSRTSAS 427
R A+S LP P + W S P RS S T PSL+++ +S S
Sbjct: 361 RRMASSPPLPEQRALPSPPPKHWVSHSPPPKQRSSSVTKRRSPSLSSKHRKGSSPS 416
