KCC002127A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002127A_C01 KCC002127A_c01
cgaaaatttaaatggcgcaattgggcctggaacctgcgcgagacgcggttggccataaga
gcacagaaatggccgtcaagTAGCACTAATTGTTATATCTCAGTGTCGCTTGCCTTTTTG
TAAGCGTGCCAGTCCCTGTAAGCCTATTTTGGGGCCTGACCGAGCGTTTCCACCACCATG
GCTTTTGCTCTCAAGTCCTCCGTGGCTCTGCCCAAGCGGGCTGGCGCTCGCGCTGCCTCC
CGCCAGGTGCTGCGTGCTCCTGCCCGCAAGCTGGTGATCCGCGCTTCGGCCGAGCCCTCC
ACCCCCGCCTCCAACGAGGCCCTGGAGAAGATCCAGTCCACCGCCAACGAGGCCTGGACC
TGGGTCAAGGACAAGTGGGCCACCACCGAGGATAGCGAGAAGCCCGCCGTGGTGGGCATC
ATCGCCGGCGTCATCGTTGCACAGATCGCCATCGGCGCCACCATTGACGTGGTGGACCGC
ATCCCCATCGTGAACAAGCTGCTGCAGCTGGTGGGTCTGGCCGTCACCGCCGTGTTCATC
TACAAGATCACCACCGACCCCGAGGAGCGCACCACCGTCAAGTCCTCCATCACCGGCTTC
CTGAAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002127A_C01 KCC002127A_c01
         (606 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||S22697 extensin - Volvox carteri (fragment) gi|21992|emb|CA...    72  8e-12
ref|NP_177036.1| protein kinase family [Arabidopsis thaliana] gi...    70  2e-11
emb|CAB62280.1| hydroxyproline-rich glycoprotein DZ-HRGP [Volvox...    69  4e-11
ref|NP_172668.1| leucine-rich repeat extensin family [Arabidopsi...    69  4e-11
ref|NP_189083.1| protein kinase -related [Arabidopsis thaliana]        69  5e-11

>pir||S22697 extensin - Volvox carteri (fragment) gi|21992|emb|CAA46283.1|
           extensin [Volvox carteri]
          Length = 464

 Score = 71.6 bits (174), Expect = 8e-12
 Identities = 62/158 (39%), Positives = 67/158 (42%), Gaps = 1/158 (0%)
 Frame = +2

Query: 131 SPCKPILGPDRAFPPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*SALRPSPPPPP 310
           SP  P+  P    PPP  +  SPP   P       PP R     P    S   PSPPPP 
Sbjct: 281 SPPPPVASPPP--PPPPRVSPSPPPPQPVSSPPPPPPPRPSPSPPPPRSS---PSPPPPS 335

Query: 311 PTRPWRRSSPPPTRPGPGSRTSGPPPRIARSPPWWASSPASSLHRSPSAPPLTWWTASPS 490
           P  P    SPPP RP P    S PPPR + SPP    SP       P  PP     ASP 
Sbjct: 336 PPPP----SPPPPRPSP----SPPPPRSSPSPPPPVVSP-------PPPPP----RASP- 375

Query: 491 *TSCCSWWVWPSPPCSSTRSPPTPRS-APPSSPPSPAS 601
                     P PP SS   PP P   +PP SPP PA+
Sbjct: 376 ----------PPPPASSPPPPPRPPPPSPPPSPPPPAT 403

 Score = 67.8 bits (164), Expect = 1e-10
 Identities = 57/156 (36%), Positives = 62/156 (39%)
 Frame = +2

Query: 128 ASPCKPILGPDRAFPPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*SALRPSPPPP 307
           ASP  P   P    PPP +  S PP   P       PP R     P       +P   PP
Sbjct: 263 ASPPLPKTSPP---PPPRVPPSPPP---PVASPPPPPPPRVSPSPPPP-----QPVSSPP 311

Query: 308 PPTRPWRRSSPPPTRPGPGSRTSGPPPRIARSPPWWASSPASSLHRSPSAPPLTWWTASP 487
           PP  P    SPPP R  P      PPP    SPP    SP+    RS  +PP    +  P
Sbjct: 312 PPPPPRPSPSPPPPRSSPSPPPPSPPP---PSPPPPRPSPSPPPPRSSPSPPPPVVSPPP 368

Query: 488 S*TSCCSWWVWPSPPCSSTRSPPTPRSAPPSSPPSP 595
                      P PP SS   PP PR  PPS PPSP
Sbjct: 369 PPPRASP----PPPPASS--PPPPPRPPPPSPPPSP 398

 Score = 61.6 bits (148), Expect = 8e-09
 Identities = 45/113 (39%), Positives = 51/113 (44%), Gaps = 10/113 (8%)
 Frame = +2

Query: 290 PSPPPPP-----PTRPWRRSSPPP--TRPGPGSRTSGPPPRIARSPPWWASSPASSLHRS 448
           PSPPPPP     P  P R SS PP  TR  P  R + P P +  SPP   +SP       
Sbjct: 220 PSPPPPPRVSTSPPPPARVSSSPPPATRSPPPRRITSPSPVLTASPPLPKTSPPPPPRVP 279

Query: 449 PSAPPLTWWTASPS*TSCCSWWVWPSPPCSSTRSPPTPR---SAPPSSPPSPA 598
           PS PP     ASP           P PP   + SPP P+   S PP  PP P+
Sbjct: 280 PSPPPP---VASPP----------PPPPPRVSPSPPPPQPVSSPPPPPPPRPS 319

 Score = 60.8 bits (146), Expect = 1e-08
 Identities = 51/144 (35%), Positives = 57/144 (39%)
 Frame = +2

Query: 170 PPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*SALRPSPPPPPPTRPWRRSSPPPT 349
           PPP  + SSPP    S      PP R     P    S   P   PPPP R      PP  
Sbjct: 233 PPPARVSSSPPPATRSP-----PPRRITSPSPVLTASPPLPKTSPPPPPRVPPSPPPPVA 287

Query: 350 RPGPGSRTSGPPPRIARSPPWWASSPASSLHRSPSAPPLTWWTASPS*TSCCSWWVWPSP 529
            P P      PPPR++ SPP     P   +   P  PP     + P   S  S    P P
Sbjct: 288 SPPPP-----PPPRVSPSPP-----PPQPVSSPPPPPPPRPSPSPPPPRSSPS----PPP 333

Query: 530 PCSSTRSPPTPRSAPPSSPPSPAS 601
           P     SPP PR +P  SPP P S
Sbjct: 334 PSPPPPSPPPPRPSP--SPPPPRS 355

 Score = 55.8 bits (133), Expect = 5e-07
 Identities = 56/162 (34%), Positives = 64/162 (38%), Gaps = 5/162 (3%)
 Frame = +2

Query: 125 RASPCKPILGPDRAFPPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*SALRPSPPP 304
           R+SP  P   P    PPP     SPP   P   + + PP    V+ P       R SPPP
Sbjct: 326 RSSPSPPPPSPPPPSPPPPRPSPSPP---PPRSSPSPPPP---VVSPPP--PPPRASPPP 377

Query: 305 PPPTRPWRRSSPPPTRPGPGSRTSGPPP--RIARSPPWWASSPASSLHRSPSAPPLTWWT 478
           PP + P     PPP RP P S    PPP    A +PP    SPA S  R+   PPL    
Sbjct: 378 PPASSP-----PPPPRPPPPSPPPSPPPPATAAANPP----SPAPSRSRA-GGPPL---- 423

Query: 479 ASPS*TSCCSWWVWPSPPCSSTRSPPTPRSAPP---SSPPSP 595
                         P PP     +PP     PP    SPP P
Sbjct: 424 -----------GTRPPPPPPEDDAPPPDYYFPPPQDMSPPPP 454

 Score = 35.4 bits (80), Expect = 0.63
 Identities = 33/98 (33%), Positives = 38/98 (38%), Gaps = 11/98 (11%)
 Frame = +2

Query: 131 SPCKPILGPD----RAFPPPWLLLSSPPWLCP---SGLALALPPARCCVLLPASW*SALR 289
           SP  P++ P     RA PPP    S PP   P   S      PPA      P+   S  R
Sbjct: 358 SPPPPVVSPPPPPPRASPPPPPASSPPPPPRPPPPSPPPSPPPPATAAANPPSPAPSRSR 417

Query: 290 PSPPP----PPPTRPWRRSSPPPTRPGPGSRTSGPPPR 391
              PP    PPP  P   + PP     P    S PPP+
Sbjct: 418 AGGPPLGTRPPPPPPEDDAPPPDYYFPPPQDMSPPPPK 455

>ref|NP_177036.1| protein kinase family [Arabidopsis thaliana]
           gi|25404764|pir||D96711 hypothetical protein F24J5.8
           [imported] - Arabidopsis thaliana
           gi|5734709|gb|AAD49974.1|AC008075_7 Contains PF|00069
           Eukaryotic protein kinase domain. [Arabidopsis thaliana]
           gi|14334806|gb|AAK59581.1| putative protein kinase
           [Arabidopsis thaliana] gi|21280865|gb|AAM44925.1|
           putative protein kinase [Arabidopsis thaliana]
          Length = 708

 Score = 70.5 bits (171), Expect = 2e-11
 Identities = 60/158 (37%), Positives = 72/158 (44%), Gaps = 9/158 (5%)
 Frame = +2

Query: 155 PDRAFPPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*SALRPSPPPPPPTRPWRRS 334
           P+ + PPP  ++ SPP   PS      PP +  +  P        PS  PPP   P   S
Sbjct: 76  PESSSPPPQPVIPSPP---PS----TSPPPQPVIPSPP-------PSASPPPALVPPLPS 121

Query: 335 SPPPTRPGPGSRTSGPPPRIARSPPWWASSPASSLH--RSPSAPPLTWWTASPS*TSCCS 508
           SPPP         S PPPR + SPP    SP  S+   +SP  PP    T SP   S   
Sbjct: 122 SPPPP-------ASVPPPRPSPSPPILVRSPPPSVRPIQSPPPPPSDRPTQSPPPPSP-- 172

Query: 509 WWVWPSPPCS-STRSPPTP------RSAPPSSPPSPAS 601
               PSPP    T+SPP+P      +S PP SPPSP S
Sbjct: 173 ----PSPPSERPTQSPPSPPSERPTQSPPPPSPPSPPS 206

 Score = 65.5 bits (158), Expect = 6e-10
 Identities = 59/167 (35%), Positives = 72/167 (42%), Gaps = 15/167 (8%)
 Frame = +2

Query: 134 PCKPILG--PDRAFPPPWL---LLSSPPWLCPSGLALALPPARCCVLLPASW*SALRP-- 292
           P +P++   P  A PPP L   L SSPP   P        P+    +L  S   ++RP  
Sbjct: 97  PPQPVIPSPPPSASPPPALVPPLPSSPP---PPASVPPPRPSPSPPILVRSPPPSVRPIQ 153

Query: 293 SPPPPPPTRPWRRSSPPPTRPGPGSR--TSGPP------PRIARSPPWWASSPASSLHRS 448
           SPPPPP  RP  +S PPP+ P P S   T  PP      P  +  PP   S P+    +S
Sbjct: 154 SPPPPPSDRP-TQSPPPPSPPSPPSERPTQSPPSPPSERPTQSPPPPSPPSPPSDRPSQS 212

Query: 449 PSAPPLTWWTASPS*TSCCSWWVWPSPPCSSTRSPPTPRSAPPSSPP 589
           P  PP                   P PP  S  SPP   S+PP SPP
Sbjct: 213 PPPPPED---------------TKPQPPRRSPNSPPPTFSSPPRSPP 244

 Score = 64.7 bits (156), Expect = 1e-09
 Identities = 55/165 (33%), Positives = 66/165 (39%), Gaps = 8/165 (4%)
 Frame = +2

Query: 131 SPCKPILGPDRAFPPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*SALRPSPPPPP 310
           SP  P+        PP +    PP   P   A   PP       P +       +PPPP 
Sbjct: 18  SPPPPLNNATSPATPPPVTSPLPPSAPPPNRAPPPPPPVTTSPPPVA-----NGAPPPPL 72

Query: 311 PTRPWRRSSPP-PTRPGPGSRTSGPPPRIARSPPWWASSPASSLHRSPSAPPLTWWTASP 487
           P  P   S PP P  P P   TS PP  +  SPP  AS P + +   PS+PP       P
Sbjct: 73  PKPPESSSPPPQPVIPSPPPSTSPPPQPVIPSPPPSASPPPALVPPLPSSPPPPASVPPP 132

Query: 488 S*TSCCSWWV-WPSPPCSSTRSPPTP------RSAPPSSPPSPAS 601
             +      V  P P     +SPP P      +S PP SPPSP S
Sbjct: 133 RPSPSPPILVRSPPPSVRPIQSPPPPPSDRPTQSPPPPSPPSPPS 177

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 48/122 (39%), Positives = 53/122 (43%), Gaps = 19/122 (15%)
 Frame = +2

Query: 293 SPP---PPPP-------------TRPWRRSSPPPTR--PGPGSRTSGPPPRIARSPPWWA 418
           SPP   PPPP             T P   S+PPP R  P P   T+ PPP    +PP   
Sbjct: 13  SPPVTSPPPPLNNATSPATPPPVTSPLPPSAPPPNRAPPPPPPVTTSPPPVANGAPP--- 69

Query: 419 SSPASSLHRSPSAPPLTWWTASPS*TSCCSWWVWPSPPCSSTRSPPTPRSAP-PSSPPSP 595
             P      S S PP     + P  TS     V PSPP S+  SPP     P PSSPP P
Sbjct: 70  -PPLPKPPESSSPPPQPVIPSPPPSTSPPPQPVIPSPPPSA--SPPPALVPPLPSSPPPP 126

Query: 596 AS 601
           AS
Sbjct: 127 AS 128

 Score = 40.0 bits (92), Expect = 0.026
 Identities = 40/112 (35%), Positives = 47/112 (41%), Gaps = 17/112 (15%)
 Frame = +2

Query: 125 RASPCKPIL--------GPDRAFPPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*S 280
           R SP  PIL         P ++ PPP    S  P   P   +   PP+      P S  S
Sbjct: 133 RPSPSPPILVRSPPPSVRPIQSPPPP---PSDRPTQSPPPPSPPSPPSERPTQSPPSPPS 189

Query: 281 ALRP--SPPPPPP-----TRPWRRSSPPP--TRPGPGSRTSGPPPRIARSPP 409
             RP  SPPPP P      RP +   PPP  T+P P  R+   PP    SPP
Sbjct: 190 E-RPTQSPPPPSPPSPPSDRPSQSPPPPPEDTKPQPPRRSPNSPPPTFSSPP 240

 Score = 33.9 bits (76), Expect = 1.8
 Identities = 23/75 (30%), Positives = 31/75 (40%)
 Frame = +2

Query: 371 TSGPPPRIARSPPWWASSPASSLHRSPSAPPLTWWTASPS*TSCCSWWVWPSPPCSSTRS 550
           T+   P ++ SPP  +  P  +   SP+ PP       PS  +       P PP  +T  
Sbjct: 3   TTPVQPPVSNSPPVTSPPPPLNNATSPATPPPVTSPLPPS--APPPNRAPPPPPPVTTSP 60

Query: 551 PPTPRSAPPSSPPSP 595
           PP    APP   P P
Sbjct: 61  PPVANGAPPPPLPKP 75

>emb|CAB62280.1| hydroxyproline-rich glycoprotein DZ-HRGP [Volvox carteri f.
           nagariensis]
          Length = 409

 Score = 69.3 bits (168), Expect = 4e-11
 Identities = 57/156 (36%), Positives = 62/156 (39%), Gaps = 2/156 (1%)
 Frame = +2

Query: 134 PCKPILGPDRAFPPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*SALRPSPPPPPP 313
           P +P L P  + PPP      PP + P       PP                PSPPPPPP
Sbjct: 76  PPQPPLPPSPSPPPP-----PPPPVPPPPPPPPPPPPP--------------PSPPPPPP 116

Query: 314 TRPWRRSSPPPTRPGPGSRTSGPPPRIARSPPWWASSPASSLHRSPSAPPLTWWTASPS* 493
             P    SPPP  P P      PPP     PP    SP+      PS PP    +  PS 
Sbjct: 117 PPPPPPPSPPPPPPPPPPPPPNPPPPPPPPPP----SPSPPPSPPPSPPPSPPPSPPPSP 172

Query: 494 TSCCSWWVWPSPPCSSTRSPP--TPRSAPPSSPPSP 595
                    PSPP S   SPP   P S PPS PPSP
Sbjct: 173 P--------PSPPPSPPPSPPPRPPPSPPPSPPPSP 200

 Score = 64.3 bits (155), Expect = 1e-09
 Identities = 53/152 (34%), Positives = 56/152 (35%)
 Frame = +2

Query: 134 PCKPILGPDRAFPPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*SALRPSPPPPPP 313
           P  P   P    PPP      PP   PS      PP       P S   +  PSPPP PP
Sbjct: 122 PPSPPPPPPPPPPPPPNPPPPPPPPPPSPSPPPSPPPSPPPSPPPSPPPSPPPSPPPSPP 181

Query: 314 TRPWRRSSPPPTRPGPGSRTSGPPPRIARSPPWWASSPASSLHRSPSAPPLTWWTASPS* 493
             P  R  P P    P S    PPPR   SP   +  P S    SP  PP       PS 
Sbjct: 182 PSPPPRPPPSPPPSPPPSPPPSPPPRPPPSPNPPSPRPPSPSPPSPRPPPRRPPFPPPS- 240

Query: 494 TSCCSWWVWPSPPCSSTRSPPTPRSAPPSSPP 589
                    P PP     +PP PR  PPS PP
Sbjct: 241 ---------PPPPRPPPPAPPPPRPPPPSPPP 263

 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 53/152 (34%), Positives = 57/152 (36%)
 Frame = +2

Query: 134 PCKPILGPDRAFPPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*SALRPSPPPPPP 313
           P  P   P R  PPP     SP    PS  +   PP R     P+      RP PP PPP
Sbjct: 198 PSPPPSPPPR--PPPSPNPPSPRPPSPSPPSPRPPPRRPPFPPPSP--PPPRPPPPAPPP 253

Query: 314 TRPWRRSSPPPTRPGPGSRTSGPPPRIARSPPWWASSPASSLHRSPSAPPLTWWTASPS* 493
            RP   S PPP  P P      PPP    SPP  +  P S L  SP  P           
Sbjct: 254 PRPPPPSPPPPLPPPPSPPPPLPPP---PSPPPPSPPPPSPLPPSPRPPK---------- 300

Query: 494 TSCCSWWVWPSPPCSSTRSPPTPRSAPPSSPP 589
                    PSPP +    PP P   PP  PP
Sbjct: 301 ---------PSPPNNPFPRPPPPNPPPPRPPP 323

 Score = 60.5 bits (145), Expect = 2e-08
 Identities = 44/104 (42%), Positives = 46/104 (43%), Gaps = 2/104 (1%)
 Frame = +2

Query: 290 PSPPPPPPTRPWRRSSPPPTRPG--PGSRTSGPPPRIARSPPWWASSPASSLHRSPSAPP 463
           PSPPP PP  P    SPPP+ P   P S    PPPR   SPP   S P S     P  PP
Sbjct: 154 PSPPPSPPPSP--PPSPPPSPPPSPPPSPPPSPPPRPPPSPP--PSPPPSPPPSPPPRPP 209

Query: 464 LTWWTASPS*TSCCSWWVWPSPPCSSTRSPPTPRSAPPSSPPSP 595
                 SP+  S       P PP  S  SP  P   PP  PPSP
Sbjct: 210 -----PSPNPPS-------PRPPSPSPPSPRPPPRRPPFPPPSP 241

 Score = 58.2 bits (139), Expect = 9e-08
 Identities = 50/144 (34%), Positives = 51/144 (34%)
 Frame = +2

Query: 164 AFPPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*SALRPSPPPPPPTRPWRRSSPP 343
           A PPP    S PP   P G+    PP       P        P PPPPPP  P   S  P
Sbjct: 39  AAPPPG---SPPPGTPPPGVP---PPTPSGPEHPPP-----PPPPPPPPPQPPLPPSPSP 87

Query: 344 PTRPGPGSRTSGPPPRIARSPPWWASSPASSLHRSPSAPPLTWWTASPS*TSCCSWWVWP 523
           P  P P      PPP     PP     P       PS PP       P           P
Sbjct: 88  PPPPPPPVPPPPPPPPPPPPPPSPPPPPPPPPPPPPSPPPPPPPPPPPPPNP-------P 140

Query: 524 SPPCSSTRSPPTPRSAPPSSPPSP 595
            PP     SP  P S PPS PPSP
Sbjct: 141 PPPPPPPPSPSPPPSPPPSPPPSP 164

 Score = 57.4 bits (137), Expect = 2e-07
 Identities = 54/171 (31%), Positives = 58/171 (33%), Gaps = 14/171 (8%)
 Frame = +2

Query: 131 SPCKPILGPDRAFPPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*SALRPSPPPPP 310
           SP  P   P    PPP      PP+  PS      PP       PA      RP PP PP
Sbjct: 216 SPRPPSPSPPSPRPPP----RRPPFPPPSPPPPRPPP-------PAP--PPPRPPPPSPP 262

Query: 311 PTRPWRRSSPPPTRPGPGSRTSGPPPRIARSPPWWASSPASSLHRSPSAPPLTWWTASPS 490
           P  P   S PPP  P P      PPP     P      P+   +  P  PP       P 
Sbjct: 263 PPLPPPPSPPPPLPPPPSPPPPSPPPPSPLPPSPRPPKPSPPNNPFPRPPPPNPPPPRPP 322

Query: 491 *TSCCSWWVWPSPPCSSTRSPPTPRSAPPS--------------SPPSPAS 601
             S       P+PP     SPP PR  PPS               PP P S
Sbjct: 323 PPS-------PNPPRPPPPSPPPPRPPPPSPNPPRPPPPSPSPPKPPPPPS 366

 Score = 56.6 bits (135), Expect = 3e-07
 Identities = 53/148 (35%), Positives = 59/148 (39%), Gaps = 5/148 (3%)
 Frame = +2

Query: 170 PPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*SALRPSPPPPPPTRPWRRSSPP-P 346
           PPP    S PP   PS      PP R     P S   +  PSPPP PP RP    +PP P
Sbjct: 168 PPPSPPPSPPPSPPPS------PPPRP----PPSPPPSPPPSPPPSPPPRPPPSPNPPSP 217

Query: 347 TRPGPGSRTSGPPPRIARSPPWWASSPASSLHRSPSAPPLTWWTASPS*T---SCCSWWV 517
             P P   +  PPPR    PP+   SP       P+ PP      SP             
Sbjct: 218 RPPSPSPPSPRPPPR---RPPFPPPSPPPPRPPPPAPPPPRPPPPSPPPPLPPPPSPPPP 274

Query: 518 WPSPPCSSTRSPPTPRSAPPS-SPPSPA 598
            P PP     SPP P   PPS  PP P+
Sbjct: 275 LPPPPSPPPPSPPPPSPLPPSPRPPKPS 302

 Score = 55.8 bits (133), Expect = 5e-07
 Identities = 58/165 (35%), Positives = 61/165 (36%), Gaps = 2/165 (1%)
 Frame = +2

Query: 107 RLPFCKRASPCKPILGPDRAFPPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*SAL 286
           R PF   + P  P   P  A PPP     SPP   P       PP+    L P    S  
Sbjct: 233 RPPFPPPSPP--PPRPPPPAPPPPRPPPPSPPPPLPP------PPSPPPPLPPPP--SPP 282

Query: 287 RPSPPPPPPTRPWRR--SSPPPTRPGPGSRTSGPPPRIARSPPWWASSPASSLHRSPSAP 460
            PSPPPP P  P  R     PP  P P      PPP   R PP    SP       PS P
Sbjct: 283 PPSPPPPSPLPPSPRPPKPSPPNNPFPRPPPPNPPP--PRPPP---PSPNPPRPPPPSPP 337

Query: 461 PLTWWTASPS*TSCCSWWVWPSPPCSSTRSPPTPRSAPPSSPPSP 595
           P      SP+          P PP  S   PP P S PP  P  P
Sbjct: 338 PPRPPPPSPNPPR-------PPPPSPSPPKPPPPPSPPPRPPRRP 375

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 51/148 (34%), Positives = 58/148 (38%)
 Frame = +2

Query: 143 PILGPDRAFPPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*SALRPSPPPPPPTRP 322
           P L P  + PPP     SPP   P   +   P  R     P +     RP PP PPP RP
Sbjct: 263 PPLPPPPSPPPPLPPPPSPPPPSPPPPSPLPPSPRPPKPSPPNN-PFPRPPPPNPPPPRP 321

Query: 323 WRRSSPPPTRPGPGSRTSGPPPRIARSPPWWASSPASSLHRSPSAPPLTWWTASPS*TSC 502
              S  PP  P P    S PPPR    PP  + +P      SPS P        P     
Sbjct: 322 PPPSPNPPRPPPP----SPPPPR----PPPPSPNPPRPPPPSPSPPK----PPPP----- 364

Query: 503 CSWWVWPSPPCSSTRSPPTPRSAPPSSP 586
                 PSPP    R PP P   PP++P
Sbjct: 365 ------PSPPPRPPRRPPRPPRRPPTAP 386

 Score = 52.0 bits (123), Expect = 7e-06
 Identities = 51/150 (34%), Positives = 52/150 (34%), Gaps = 3/150 (2%)
 Frame = +2

Query: 155 PDRAFPPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*SALRPSPPPPPPTRPWRRS 334
           P    PPP       P   PSG     PP       P      L PSP PPPP  P    
Sbjct: 41  PPPGSPPPGTPPPGVPPPTPSGPEHPPPPPPPPPPPPQP---PLPPSPSPPPPPPPPVPP 97

Query: 335 SPPPTRPGPGSRTSGPPPRIARSPPWWASSPASSLHRSPSAPPLTWWTASPS*TSCCSWW 514
            PPP  P P   +  PPP     PP     P       P  PP       PS        
Sbjct: 98  PPPPPPPPPPPPSPPPPPPPPPPPPPSPPPPPPPPPPPPPNPPPPPPPPPPS-------- 149

Query: 515 VWPSPPCSSTRSPPTPRSA---PPSSPPSP 595
             PSPP S   SPP        PPS PPSP
Sbjct: 150 --PSPPPSPPPSPP-----PSPPPSPPPSP 172

 Score = 51.2 bits (121), Expect = 1e-05
 Identities = 47/138 (34%), Positives = 51/138 (36%)
 Frame = +2

Query: 182 LLLSSPPWLCPSGLALALPPARCCVLLPASW*SALRPSPPPPPPTRPWRRSSPPPTRPGP 361
           LL SSP  L   G     PP R   ++      AL  +P  PPP  P   + PP   P  
Sbjct: 9   LLASSPHAL---GAPARKPPPRRSPVV------ALVETPAAPPPGSPPPGTPPPGVPPPT 59

Query: 362 GSRTSGPPPRIARSPPWWASSPASSLHRSPSAPPLTWWTASPS*TSCCSWWVWPSPPCSS 541
            S    PPP     PP     P   L  SPS PP       P           P PP   
Sbjct: 60  PSGPEHPPPPPPPPPP----PPQPPLPPSPSPPPPPPPPVPPPPP--------PPPPPPP 107

Query: 542 TRSPPTPRSAPPSSPPSP 595
             SPP P   PP  PPSP
Sbjct: 108 PPSPPPPPPPPPPPPPSP 125

 Score = 35.8 bits (81), Expect = 0.49
 Identities = 15/23 (65%), Positives = 15/23 (65%)
 Frame = +2

Query: 290 PSPPPPPPTRPWRRSSPPPTRPG 358
           PSPPP PP RP R    PPT PG
Sbjct: 365 PSPPPRPPRRPPRPPRRPPTAPG 387

>ref|NP_172668.1| leucine-rich repeat extensin family [Arabidopsis thaliana]
           gi|25402701|pir||E86255 hypothetical protein [imported]
           - Arabidopsis thaliana gi|3157926|gb|AAC17609.1| Strong
           similarity to extensin-like protein gb|Z34465 from Zea
           mays. [Arabidopsis thaliana] gi|13809918|gb|AAK07681.1|
           leucine-rich repeat/extensin 1 [Arabidopsis thaliana]
          Length = 744

 Score = 69.3 bits (168), Expect = 4e-11
 Identities = 53/156 (33%), Positives = 71/156 (44%), Gaps = 11/156 (7%)
 Frame = +2

Query: 161 RAFPPPWLLLSSPP-----WLCPSGLALALPPARCCVLLPASW*SALRPSPPPPPPTR-- 319
           R  PPP  + SSPP      + P+  A + PP     + P    S    SPPPPP ++  
Sbjct: 395 RTLPPPIYVYSSPPPPPSSKMSPTVRAYSPPPPPSSKMSP----SVRAYSPPPPPYSKMS 450

Query: 320 PWRRSSPPPTRPGPGSRTSGPPPRIARSPP----WWASSPASSLHRSPSAPPLTWWTASP 487
           P  R+ PPP  P P    S PPP +  SPP    + +  P   ++ SP  PP  + +  P
Sbjct: 451 PSVRAYPPPPPPSP----SPPPPYVYSSPPPPYVYSSPPPPPYVYSSPPPPPYVYSSPPP 506

Query: 488 S*TSCCSWWVWPSPPCSSTRSPPTPRSAPPSSPPSP 595
                   +V+ SPP      PP   S+PP  PPSP
Sbjct: 507 P-------YVYSSPP------PPYVYSSPPPPPPSP 529

 Score = 52.4 bits (124), Expect = 5e-06
 Identities = 53/168 (31%), Positives = 70/168 (41%), Gaps = 10/168 (5%)
 Frame = +2

Query: 125 RASPCKPILGPDRAFPPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*SALRPSPPP 304
           RA P  P   P    PPP  + SSPP   P  +  + PP       P          PPP
Sbjct: 454 RAYPPPP---PPSPSPPPPYVYSSPP---PPYVYSSPPPPPYVYSSPPPPPYVYSSPPPP 507

Query: 305 -----PPPTRPWRRSSPPP---TRPGPGSRTSGPPPRIARSPPWWASSPASSLHRSPSAP 460
                PPP  P+  SSPPP   + P P   +S PPP +  +P   +  P S ++     P
Sbjct: 508 YVYSSPPP--PYVYSSPPPPPPSPPPPCPESSPPPPVVYYAPVTQSPPPPSPVY----YP 561

Query: 461 PLTWWTASPS*TSCCSWWVWPSPPCSSTRSPPTPRSAPP--SSPPSPA 598
           P+T     PS            PP +++  PP+P   PP   SPP P+
Sbjct: 562 PVTQSPPPPSPVY--------YPPVTNSPPPPSPVYYPPVTYSPPPPS 601

 Score = 49.7 bits (117), Expect = 3e-05
 Identities = 51/166 (30%), Positives = 62/166 (36%), Gaps = 10/166 (6%)
 Frame = +2

Query: 134  PCKPILGPD-RAFPPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*SALRPSPPPPP 310
            P  P+  P     PPP   L  PP + PS      PP    V  P      + PSPPPP 
Sbjct: 599  PPSPVYYPQVTPSPPPPSPLYYPP-VTPS------PPPPSPVYYPP-----VTPSPPPPS 646

Query: 311  PTR--PWRRSSPPPTRPGPGSRTSGPPPRIA-------RSPPWWASSPASSLHRSPSAPP 463
            P    P   S PPP+     S T  PPP            PP  A         +PS  P
Sbjct: 647  PVYYPPVTPSPPPPSPVYYPSETQSPPPPTEYYYSPSQSPPPTKACKEGHPPQATPSYEP 706

Query: 464  LTWWTASPS*TSCCSWWVWPSPPCSSTRSPPTPRSAPPSSPPSPAS 601
               ++ S S          P PP  ++  PP P  +  +SPP P S
Sbjct: 707  PPEYSYSSS----------PPPPSPTSYFPPMPSVSYDASPPPPPS 742

 Score = 46.2 bits (108), Expect = 4e-04
 Identities = 33/90 (36%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
 Frame = +2

Query: 332 SSPPPT-RPGPGSRTSGPPPRIARSPPWWASSPASSLHRSPSAPPLTWWTASPS*TSCCS 508
           S PPPT +  P  RT  PP  +  SPP   SS  S   R+ S PP      SPS  +   
Sbjct: 382 SPPPPTFKMSPEVRTLPPPIYVYSSPPPPPSSKMSPTVRAYSPPPPPSSKMSPSVRA--- 438

Query: 509 WWVWPSPPCSSTRSPPTPRSAPPSSPPSPA 598
              +  PP   ++  P+ R+ PP  PPSP+
Sbjct: 439 ---YSPPPPPYSKMSPSVRAYPPPPPPSPS 465

 Score = 42.7 bits (99), Expect = 0.004
 Identities = 53/172 (30%), Positives = 62/172 (35%), Gaps = 13/172 (7%)
 Frame = +2

Query: 113  PFCKRASPCKPIL--GPDRAFPPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*SAL 286
            P C  +SP  P++   P    PPP   +  PP           PP    V  P    S  
Sbjct: 531  PPCPESSPPPPVVYYAPVTQSPPPPSPVYYPP-------VTQSPPPPSPVYYPPVTNS-- 581

Query: 287  RPSPPPPPPTRPWRRSSPPPTRP-GPGSRTSGPPPRIARSPPWWASSPASSLHRSPSAPP 463
             P PP P    P   S PPP+    P    S PPP     PP   S P  S    P   P
Sbjct: 582  -PPPPSPVYYPPVTYSPPPPSPVYYPQVTPSPPPPSPLYYPPVTPSPPPPSPVYYPPVTP 640

Query: 464  LTWWTASPS*TSCCSWWVWPSPP-------CSSTRSPPTPRS---APPSSPP 589
                 + P  +      V PSPP        S T+SPP P     +P  SPP
Sbjct: 641  -----SPPPPSPVYYPPVTPSPPPPSPVYYPSETQSPPPPTEYYYSPSQSPP 687

>ref|NP_189083.1| protein kinase -related [Arabidopsis thaliana]
          Length = 694

 Score = 68.9 bits (167), Expect = 5e-11
 Identities = 60/153 (39%), Positives = 66/153 (42%), Gaps = 9/153 (5%)
 Frame = +2

Query: 170 PPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*SALRPSPPPP--PPTRPWRRSSPP 343
           PPP  L  +PP   P+ L  ALPP      LP     AL P PPP   PP  P   S PP
Sbjct: 22  PPPQPLPVTPP-PPPTALPPALPPPPPPTALPP----ALPPPPPPTTVPPIPPSTPSPPP 76

Query: 344 PTRPGPGSRTSGPPPRIARSPPWWASSPASSLHRSPS-------APPLTWWTASPS*TSC 502
           P  P P      PP     SPP   S    S   +PS       +PPLT     PS T+ 
Sbjct: 77  PLTPSPL-----PPSPTTPSPPLTPSPTTPSPPLTPSPPPAITPSPPLTPSPLPPSPTTP 131

Query: 503 CSWWVWPSPPCSSTRSPPTPRSAPPSSPPSPAS 601
                 P PP  S  SPP   S PPSSP  P+S
Sbjct: 132 S-----PPPPSPSIPSPPLTPSPPPSSPLRPSS 159

 Score = 66.6 bits (161), Expect = 3e-10
 Identities = 61/157 (38%), Positives = 67/157 (41%), Gaps = 17/157 (10%)
 Frame = +2

Query: 170 PPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*SALRPSPP----PPP--------- 310
           PPP  L   PP L P     ALPPA    L P    + + P PP    PPP         
Sbjct: 33  PPPTAL---PPALPPPPPPTALPPA----LPPPPPPTTVPPIPPSTPSPPPPLTPSPLPP 85

Query: 311 -PTRPWRRSSPPPTRPGPGSRTSGPPPRIARSPPWWASSPASSLHRSPSAPPLTWWTASP 487
            PT P    +P PT P P   T  PPP I  SPP    SP      +PS PP +    SP
Sbjct: 86  SPTTPSPPLTPSPTTPSP-PLTPSPPPAITPSPP-LTPSPLPPSPTTPSPPPPSPSIPSP 143

Query: 488 S*TSCCSWWVWPSPPCSS---TRSPPTPRSAPPSSPP 589
             T        PSPP SS     SPP P  A PS+PP
Sbjct: 144 PLT--------PSPPPSSPLRPSSPPPPSPATPSTPP 172

 Score = 64.3 bits (155), Expect = 1e-09
 Identities = 58/157 (36%), Positives = 67/157 (41%), Gaps = 4/157 (2%)
 Frame = +2

Query: 143 PILGPDRAFPPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*SALRPSPPPPPPT-- 316
           P L P    P P L  S PP + PS      PP     L P    S   PSPPPP P+  
Sbjct: 92  PPLTPSPTTPSPPLTPSPPPAITPS------PPLTPSPLPP----SPTTPSPPPPSPSIP 141

Query: 317 RPWRRSSPPPTRPGPGSRTSGPPPRIARSPPWWASSPASSLHRSPSAPPLTWWTASPS*T 496
            P    SPPP+ P    R S PPP           SPA+      S PP +  T  P   
Sbjct: 142 SPPLTPSPPPSSP---LRPSSPPP----------PSPATPSTPPRSPPPPSTPTPPPRVG 188

Query: 497 SCCSWWVWPSPPCSST--RSPPTPRSAPPSSPPSPAS 601
           S       P PP S +  RSP TP + P SSPP+ +S
Sbjct: 189 SLS-----PPPPASPSGGRSPSTPSTTPGSSPPAQSS 220

 Score = 55.5 bits (132), Expect = 6e-07
 Identities = 52/155 (33%), Positives = 60/155 (38%), Gaps = 12/155 (7%)
 Frame = +2

Query: 170 PPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*SALRPSPPPPPPTRPWRRSSPPPT 349
           PPP    S PP   P      +PP              L  +PPPPP   P     PPP 
Sbjct: 5   PPPGGTPSPPPQPLP------IPPPP----------QPLPVTPPPPPTALPPALPPPPPP 48

Query: 350 RPGPGSRTSGPPPRIARSPPWWASSPASSLHRSP-------SAPPLTWWTASPS*TSCCS 508
              P +    PPP      P    SP   L  SP        +PPLT    +PS      
Sbjct: 49  TALPPALPPPPPPTTVPPIPPSTPSPPPPLTPSPLPPSPTTPSPPLTPSPTTPSPP---- 104

Query: 509 WWVWPSPPCSSTRSPP-TPRSAPPS----SPPSPA 598
             + PSPP + T SPP TP   PPS    SPP P+
Sbjct: 105 --LTPSPPPAITPSPPLTPSPLPPSPTTPSPPPPS 137

 Score = 46.2 bits (108), Expect = 4e-04
 Identities = 37/111 (33%), Positives = 46/111 (41%), Gaps = 3/111 (2%)
 Frame = +2

Query: 278 SALRPSPPPPPPTRPWRRSSPPPTRPGPGSRTSGP---PPRIARSPPWWASSPASSLHRS 448
           SA  P   P PP +P     PPP +P P +    P   PP +   PP  A  PA      
Sbjct: 3   SAPPPGGTPSPPPQP--LPIPPPPQPLPVTPPPPPTALPPALPPPPPPTALPPA----LP 56

Query: 449 PSAPPLTWWTASPS*TSCCSWWVWPSPPCSSTRSPPTPRSAPPSSPPSPAS 601
           P  PP T     PS  S       P PP + +  PP+P +  P   PSP +
Sbjct: 57  PPPPPTTVPPIPPSTPS-------PPPPLTPSPLPPSPTTPSPPLTPSPTT 100

 Score = 40.0 bits (92), Expect = 0.026
 Identities = 35/104 (33%), Positives = 41/104 (38%), Gaps = 3/104 (2%)
 Frame = +2

Query: 131 SPCKPILGPDRAFPPPWLLLSSPPWLCPSGLALALPPARCCVLLPASW*SALRPSPPPPP 310
           +P  P   P    PP   L  SPP   P   +   PP+      PA+  +  R  PPP  
Sbjct: 130 TPSPPPPSPSIPSPP---LTPSPPPSSPLRPSSPPPPS------PATPSTPPRSPPPPST 180

Query: 311 PTRPWRRSS---PPPTRPGPGSRTSGPPPRIARSPPWWASSPAS 433
           PT P R  S   PPP  P  G   S P      SPP  +S   S
Sbjct: 181 PTPPPRVGSLSPPPPASPSGGRSPSTPSTTPGSSPPAQSSKELS 224



EST assemble image


clone accession position
1 LC020b08_r AV620292 1 526
2 HC080a06_r AV637965 107 429
3 HC098a10_r AV639335 113 606




Chlamydomonas reinhardtii
Kazusa DNA Research Institute