Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002123A_C01 KCC002123A_c01
(557 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T10741 extensin-like protein PRP5 - Persian tobacco gi|2653... 36 4e-04
ref|NP_501120.1| hect domain containing protein 1 (4H900) [Caeno... 42 0.004
ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix prote... 42 0.007
ref|ZP_00033604.1| COG4625: Uncharacterized protein with a C-ter... 40 0.021
ref|XP_294174.2| similar to mucin [Homo sapiens] 40 0.028
>pir||T10741 extensin-like protein PRP5 - Persian tobacco
gi|2653671|gb|AAC15893.1| 120 kDa style glycoprotein
[Nicotiana alata]
Length = 461
Score = 36.2 bits (82), Expect(2) = 4e-04
Identities = 18/48 (37%), Positives = 24/48 (49%)
Frame = -2
Query: 436 RSPPAPCGRSPVLSSPCRQHSRWKLPDTAAVEPASPSPSMRPTRSPAS 293
+SPP P +SP L P Q + P + A +P P PS +P P S
Sbjct: 91 KSPPPPPAKSPPLPPPPVQPPKQSPPPSPAKQPPPPPPSAKPPVKPPS 138
Score = 30.4 bits (67), Expect(2) = 1.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 173 PLALPIPRRPPPSPDLSLIAPPTPAFS 93
P LPI + PPP+ L + PP PA++
Sbjct: 197 PAQLPIRQPPPPATQLPIRKPPPPAYT 223
Score = 28.9 bits (63), Expect(2) = 4e-04
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 173 PLALPIPRRPPPSPDLSLIAPPTPA 99
P LPI + PPP+ L + PP PA
Sbjct: 174 PAQLPIRQPPPPATQLPIRKPPPPA 198
Score = 22.7 bits (47), Expect(2) = 1.1
Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 2/90 (2%)
Frame = -2
Query: 469 PQWSG*HGSSQRSPPAPCGRSPVLSSPCRQHSRWKLPDTAAVEPASPSPSMR--PTRSPA 296
P+ S +++ PP P P + P + A P+ P P R P + P
Sbjct: 111 PKQSPPPSPAKQPPPPPPSAKPPVKPPSPSPAAQPPATQRATPPSQPPPMQRAPPPKLPL 170
Query: 295 SR*HWSSSPRLHVAEQNMSAQALRVRLEPP 206
+L + + A L +R PP
Sbjct: 171 P----PPPAQLPIRQPPPPATQLPIRKPPP 196
>ref|NP_501120.1| hect domain containing protein 1 (4H900) [Caenorhabditis elegans]
gi|7497007|pir||T29285 hypothetical protein C34D4.14 -
Caenorhabditis elegans gi|1330345|gb|AAB00699.1|
Hypothetical protein C34D4.14 [Caenorhabditis elegans]
Length = 2761
Score = 42.4 bits (98), Expect = 0.004
Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Frame = +1
Query: 73 APRPPADENAGVGGAIKLRSGLGGGLRGIGSASGP----LKPLASANNKAAPGGPSKLGQ 240
+P PP ++ L SGLG GL + P L AS N G PS G
Sbjct: 1645 SPPPPPPSSSTFSS---LASGLGFGLNRHKQHNKPAASALSRFASVKNTTPAGTPSSGGS 1701
Query: 241 TYSAQPRAVLG--NLTNVNAKLGSSSAALTGKAKPAQPLQYQAASIEN 378
+ A + + NL + K S A TG+A A+ LQ+Q S+EN
Sbjct: 1702 SGGAIGKKSMSTTNLVDERQKTSGPSVASTGQAASAESLQHQTPSLEN 1749
>ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix protein;
plenty-of-prolines-101; serine/arginine repetitive
matrix protein 1 [Rattus norvegicus]
Length = 958
Score = 41.6 bits (96), Expect = 0.007
Identities = 32/90 (35%), Positives = 42/90 (46%)
Frame = -2
Query: 538 PRWRRSRPRLPGCRRGLSSTC*RPQWSG*HGSSQRSPPAPCGRSPVLSSPCRQHSRWKLP 359
P+ R + P P RR S + + S QRSPP RSP LSS +H + P
Sbjct: 664 PKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSPPVTKRRSPSLSS---KHRKGSSP 720
Query: 358 DTAAVEPASPSPSMRPTRSPASR*HWSSSP 269
+ E SP P+ R + SP R +SSP
Sbjct: 721 GRSTREARSPQPNKRHSPSPRPRAPQTSSP 750
>ref|ZP_00033604.1| COG4625: Uncharacterized protein with a C-terminal OMP (outer
membrane protein) domain [Burkholderia fungorum]
Length = 484
Score = 40.0 bits (92), Expect = 0.021
Identities = 29/84 (34%), Positives = 38/84 (44%)
Frame = +1
Query: 136 LGGGLRGIGSASGPLKPLASANNKAAPGGPSKLGQTYSAQPRAVLGNLTNVNAKLGSSSA 315
L GGL G A GPL PL S + + G LG T S P A L + V++ G+ S
Sbjct: 351 LSGGLTGGSGAGGPLAPLTSVVS-SLTGSLGGLGGTGSGSPLAPLTGV--VSSVTGALSG 407
Query: 316 ALTGKAKPAQPLQYQAASIENAAG 387
A P P+ +S+ A G
Sbjct: 408 ATNSSGNPLAPVTSAVSSLTGALG 431
>ref|XP_294174.2| similar to mucin [Homo sapiens]
Length = 765
Score = 39.7 bits (91), Expect = 0.028
Identities = 39/131 (29%), Positives = 56/131 (41%), Gaps = 7/131 (5%)
Frame = -2
Query: 550 RAHRPRWRRSRPRLPGCRRGLSSTC*RPQWSG*HGSSQRSPPAPCGRSPVLSSP---CRQ 380
RAH R+ R RP P + +P G++++SPP ++P +SP RQ
Sbjct: 492 RAHPRRYARRRPEEPTTDATSGARVEQPTPDATPGAARKSPPQTLHQAPAPNSPPQTLRQ 551
Query: 379 HSRWKL-PDTAAVEPASPSPSMRPTRSPASR*HWSSSPR-LHVAEQNMS--AQALRVRLE 212
W P T PA SP ++PA W+S P+ L A + + R R E
Sbjct: 552 APAWNSPPQTLRQAPAWNSPPQTLRQAPA----WNSPPQTLRQAPPGTAHHRRYARRRPE 607
Query: 211 PPCCWPTPAAS 179
P TP A+
Sbjct: 608 QPTTDATPGAA 618
