Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002121A_C01 KCC002121A_c01
(502 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00060824.1| COG1160: Predicted GTPases [Clostridium therm... 88 7e-17
emb|CAB76934.1| putative GTP-binding protein [Clostridium thermo... 88 7e-17
ref|NP_228255.1| conserved hypothetical protein [Thermotoga mari... 86 2e-16
ref|ZP_00129810.1| COG1160: Predicted GTPases [Desulfovibrio des... 86 3e-16
ref|NP_719457.1| GTP-binding protein [Shewanella oneidensis MR-1... 83 2e-15
>ref|ZP_00060824.1| COG1160: Predicted GTPases [Clostridium thermocellum ATCC 27405]
Length = 400
Score = 87.8 bits (216), Expect = 7e-17
Identities = 49/118 (41%), Positives = 70/118 (58%)
Frame = +2
Query: 2 LETLQDGDRVLISEACNHNRITSACNDIGMVQIPNKLEAALGGKKLQIEHAFGREFPELE 181
L++LQDGD VLISE C H+R C+DIG V++P + K L E G EFPE
Sbjct: 283 LDSLQDGDTVLISEGCTHHR---QCDDIGTVKLPRWINNYTK-KNLNFEFTSGTEFPE-- 336
Query: 182 SGGMDGLKLAIHCGGCMIDAQKMQQRMKDLHEAGVPVTNYGVFFSWAAWPDALRRALE 355
+ KL +HCGGCM++ ++M+ R K E VP+TNYG+ ++ L+R+L+
Sbjct: 337 --DLTRYKLIVHCGGCMLNEREMKYRYKCAVEQNVPITNYGILIAYV--HGILKRSLQ 390
>emb|CAB76934.1| putative GTP-binding protein [Clostridium thermocellum]
Length = 400
Score = 87.8 bits (216), Expect = 7e-17
Identities = 49/118 (41%), Positives = 70/118 (58%)
Frame = +2
Query: 2 LETLQDGDRVLISEACNHNRITSACNDIGMVQIPNKLEAALGGKKLQIEHAFGREFPELE 181
L++LQDGD VLISE C H+R C+DIG V++P + K L E G EFPE
Sbjct: 283 LDSLQDGDTVLISEGCTHHR---QCDDIGTVKLPRWINNYTK-KNLNFEFTSGTEFPE-- 336
Query: 182 SGGMDGLKLAIHCGGCMIDAQKMQQRMKDLHEAGVPVTNYGVFFSWAAWPDALRRALE 355
+ KL +HCGGCM++ ++M+ R K E VP+TNYG+ ++ L+R+L+
Sbjct: 337 --DLTRYKLIVHCGGCMLNEREMKYRYKCAVEQNVPITNYGILIAYV--HGILKRSLQ 390
>ref|NP_228255.1| conserved hypothetical protein [Thermotoga maritima]
gi|7462351|pir||H72377 conserved hypothetical protein -
Thermotoga maritima (strain MSB8)
gi|4980952|gb|AAD35530.1|AE001722_14 conserved
hypothetical protein [Thermotoga maritima]
Length = 404
Score = 86.3 bits (212), Expect = 2e-16
Identities = 50/126 (39%), Positives = 73/126 (57%)
Frame = +2
Query: 2 LETLQDGDRVLISEACNHNRITSACNDIGMVQIPNKLEAALGGKKLQIEHAFGREFPELE 181
+E L+DGD V+I E C H +T DIG V+IP L G + L + G++FP+LE
Sbjct: 287 IEELEDGDTVVIMEGCTHRPLTE---DIGRVKIPRWLVNHTGAQ-LNFKVIAGKDFPDLE 342
Query: 182 SGGMDGLKLAIHCGGCMIDAQKMQQRMKDLHEAGVPVTNYGVFFSWAAWPDALRRALEPW 361
++G KL IHCGGC+++ M +R++ G+P+TNYGV S+ L RA+ P+
Sbjct: 343 E--IEGAKLIIHCGGCVLNRAAMMRRVRMAKRLGIPMTNYGVTISYL--HGVLDRAIRPF 398
Query: 362 GVEPPV 379
E V
Sbjct: 399 REEVKV 404
>ref|ZP_00129810.1| COG1160: Predicted GTPases [Desulfovibrio desulfuricans G20]
Length = 323
Score = 85.5 bits (210), Expect = 3e-16
Identities = 47/122 (38%), Positives = 73/122 (59%)
Frame = +2
Query: 2 LETLQDGDRVLISEACNHNRITSACNDIGMVQIPNKLEAALGGKKLQIEHAFGREFPELE 181
+++L+DGD VL+ EAC+H+ + +DIG V+IP + G++L E G +FPE
Sbjct: 212 IDSLRDGDTVLMCEACSHHAVA---DDIGRVKIPRWI-TQYTGRELSFEMYAGHDFPE-- 265
Query: 182 SGGMDGLKLAIHCGGCMIDAQKMQQRMKDLHEAGVPVTNYGVFFSWAAWPDALRRALEPW 361
++ LA+HCGGCM + +M +R+++ GVPVTNYGV S L R + P+
Sbjct: 266 --DLERYALAVHCGGCMTNRAEMMRRIRECTRRGVPVTNYGVAISKV--QGVLERVVAPF 321
Query: 362 GV 367
G+
Sbjct: 322 GL 323
>ref|NP_719457.1| GTP-binding protein [Shewanella oneidensis MR-1]
gi|24350252|gb|AAN56901.1|AE015824_12 GTP-binding
protein [Shewanella oneidensis MR-1]
Length = 394
Score = 82.8 bits (203), Expect = 2e-15
Identities = 49/124 (39%), Positives = 70/124 (55%)
Frame = +2
Query: 2 LETLQDGDRVLISEACNHNRITSACNDIGMVQIPNKLEAALGGKKLQIEHAFGREFPELE 181
L+TLQDGD+VLISEAC+HN +DIG V++P + + G K+L+ G +FP
Sbjct: 279 LDTLQDGDKVLISEACSHNVQE---DDIGRVKLPRWINSYTG-KQLEFVVTSGHDFPN-- 332
Query: 182 SGGMDGLKLAIHCGGCMIDAQKMQQRMKDLHEAGVPVTNYGVFFSWAAWPDALRRALEPW 361
++ L IHCG CM + +M +R+++ VP+TNYGV S L R L P+
Sbjct: 333 --DLEQYALVIHCGACMFNRNEMLRRIRECQRRQVPITNYGVAIS--KLQGVLPRVLTPF 388
Query: 362 GVEP 373
P
Sbjct: 389 NRNP 392
