Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002118A_C01 KCC002118A_c01
(450 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_000083.1| alpha 4 type IV collagen precursor; Collagen IV... 34 0.52
ref|XP_234923.2| similar to KIAA1086 protein [Rattus norvegicus] 33 0.67
ref|NP_003191.1| transcription factor 3; transcription factor E2... 33 1.1
pir||S10099 transcription factor ITF-1 - human (fragment) gi|339... 33 1.1
ref|XP_309795.1| ENSANGP00000012534 [Anopheles gambiae] gi|21293... 33 1.1
>ref|NP_000083.1| alpha 4 type IV collagen precursor; Collagen IV, alpha-4 polypeptide;
collagen of basement membrane, alpha-4 chain [Homo
sapiens] gi|1705536|sp|P53420|CA44_HUMAN Collagen alpha
4(IV) chain precursor gi|1360674|pir||CGHU1B collagen
alpha 4(IV) chain precursor - human
gi|574806|emb|CAA56943.1| type IV collagen alpha 4 chain
[Homo sapiens] gi|4160232|emb|CAA76763.1| collagen alpha
4 type IV [Homo sapiens]
Length = 1690
Score = 33.9 bits (76), Expect = 0.52
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +1
Query: 241 KRADPGSLSTQPP*KNQEKKPPGSPGSGTTP 333
+R DPGS PP +K PPG PGS P
Sbjct: 1211 ERGDPGSPGISPPGPRGKKGPPGPPGSSGPP 1241
>ref|XP_234923.2| similar to KIAA1086 protein [Rattus norvegicus]
Length = 775
Score = 33.5 bits (75), Expect = 0.67
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +1
Query: 64 VHLSYFYRRLHDAECMSPIVYTSTSPN-PINRFIDDALRN*TQIMSPRTELTRRWLPYGR 240
+HL+ RL + + P + +T P+ P+ R + L+ Q R E +RW R
Sbjct: 322 MHLTGRRHRLQYRKKVDPTLPVATRPSGPMQRVLAKRLQRQRQQTQARLEDAQRWNSELR 381
Query: 241 KRADPGSLSTQPP*KNQEKKPPGSP 315
++ + +PP E++ PGSP
Sbjct: 382 QQEEHSRQPEEPPQPQVEEQLPGSP 406
>ref|NP_003191.1| transcription factor 3; transcription factor E2-alpha; E2A
immunoglobulin enhancer-binding factor E12/E47;
immunoglobulin transcription factor 1; kappa-E2-binding
factor [Homo sapiens] gi|135655|sp|P15923|TFE2_HUMAN
Transcription factor E2-alpha (Immunoglobulin enhancer
binding factor E12/E47) (Transcription factor-3) (TCF-3)
(Immunoglobulin transcription factor-1) (Transcription
factor ITF-1) (Kappa-E2-binding factor)
gi|105865|pir||A34734 transcription factor 3 - human
gi|339478|gb|AAA61146.1| transcription factor E2A
Length = 654
Score = 32.7 bits (73), Expect = 1.1
Identities = 21/45 (46%), Positives = 23/45 (50%), Gaps = 3/45 (6%)
Frame = +1
Query: 238 RKRADPGSLSTQPP*KNQEKKPPGSPGSGTTPS---HYARAMSTY 363
R+RA GSL TQP K K PPG P S PS Y R + Y
Sbjct: 158 RRRAADGSLDTQP--KKVRKVPPGLPSSVYPPSSGEDYGRDATAY 200
>pir||S10099 transcription factor ITF-1 - human (fragment)
gi|33982|emb|CAA36297.1| ITF-1 DNA binding protein [Homo
sapiens]
Length = 582
Score = 32.7 bits (73), Expect = 1.1
Identities = 21/45 (46%), Positives = 23/45 (50%), Gaps = 3/45 (6%)
Frame = +1
Query: 238 RKRADPGSLSTQPP*KNQEKKPPGSPGSGTTPS---HYARAMSTY 363
R+RA GSL TQP K K PPG P S PS Y R + Y
Sbjct: 90 RRRAADGSLDTQP--KKVRKVPPGLPSSVYPPSSGEDYGRDATAY 132
>ref|XP_309795.1| ENSANGP00000012534 [Anopheles gambiae] gi|21293429|gb|EAA05574.1|
ENSANGP00000012534 [Anopheles gambiae str. PEST]
Length = 1444
Score = 32.7 bits (73), Expect = 1.1
Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +2
Query: 50 IRLYWYTCLTSTEGCMTRNVCHL*CTRAPRRTQSIVLLTML*ETKRK-SCPPELN*QGGG 226
+++Y +T T C C C P+RT S + + K + +CP Q G
Sbjct: 941 MKVYGHTIQVGTNACSNNERCSHICVGGPKRTYSCLCPDGMELVKERCTCPAGTTAQANG 1000
Query: 227 CLMAGK 244
C GK
Sbjct: 1001 CARTGK 1006
