KCC002115A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002115A_C01 KCC002115A_c01
ccttttgtatacCACTTGTTACTCTCAATACAAAGAATGCTGCAGACGCGCGCCCCCGTC
GTGTCGCGCCCGGCCATTGGTCGCGCTGTGCGCCCCGCCGCTCGCCCCGTCGTTCGGACC
CAGGCACTGTTTGGCTTTGGCAAGACTGCCGAGCCTGAGACGACCTCGGAGTTCTACCAG
TTCCAGGTCAAGGACATTGACGGCAAGAACTTTAAGCTATCGTCCCTCAAGGACAAGGCG
GTTCTGGTCGTGAACCTGGCCAGTGCTTGCGGCTTCACTCCCCAGTACGCCGAGCTTCAG
GACCTGCAAGACAAGTACGGCAAGCAGGGCTTTGTGGTCCTGGGCTTCCCCTGCAACCAG
TTCGGCGCGCAGGAGCCGGGCTCCAACCAGACCATCAAGCAGTTCGCCAAGTCCAACTAC
GGCGTGACCTTCCCCCTCATGTCCAAGGTCGACGTGAACGGGCCCGGCGCCGAGCCCCTG
TTCGACTGGCTTAAGACCCAGAA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002115A_C01 KCC002115A_c01
         (503 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_009803.1| Glutathione peroxidase paralogue; Gpx2p [Saccha...   148  4e-35
ref|ZP_00008448.1| COG0386: Glutathione peroxidase [Rhodopseudom...   142  3e-33
ref|NP_596146.1| glutathione peroxidase [Schizosaccharomyces pom...   141  5e-33
ref|NP_012303.1| Hydroperoxide resistance conferring gene. Senso...   137  6e-32
ref|NP_812882.1| glutathione peroxidase [Bacteroides thetaiotaom...   137  8e-32

>ref|NP_009803.1| Glutathione peroxidase paralogue; Gpx2p [Saccharomyces cerevisiae]
           gi|585222|sp|P38143|GPX2_YEAST Glutathione peroxidase 2
           gi|626804|pir||S46121 probable glutathione peroxidase
           (EC 1.11.1.9) - yeast  (Saccharomyces cerevisiae)
           gi|536655|emb|CAA85207.1| unnamed protein product
           [Saccharomyces cerevisiae]
          Length = 162

 Score =  148 bits (373), Expect = 4e-35
 Identities = 65/113 (57%), Positives = 87/113 (76%)
 Frame = +1

Query: 163 TSEFYQFQVKDIDGKNFKLSSLKDKAVLVVNLASACGFTPQYAELQDLQDKYGKQGFVVL 342
           T+ FY  + KD  G++FK   LK K VL+VN+AS CGFTPQY EL++L  KY  +GFV+L
Sbjct: 2   TTSFYDLECKDKKGESFKFDQLKGKVVLIVNVASKCGFTPQYKELEELYKKYQDKGFVIL 61

Query: 343 GFPCNQFGAQEPGSNQTIKQFAKSNYGVTFPLMSKVDVNGPGAEPLFDWLKTQ 501
           GFPCNQFG QEPGS++ I +F + NYGVTFP+M K+DVNG  A+ ++++LK+Q
Sbjct: 62  GFPCNQFGKQEPGSDEQITEFCQLNYGVTFPIMKKIDVNGSNADSVYNYLKSQ 114

>ref|ZP_00008448.1| COG0386: Glutathione peroxidase [Rhodopseudomonas palustris]
          Length = 158

 Score =  142 bits (357), Expect = 3e-33
 Identities = 64/112 (57%), Positives = 80/112 (71%)
 Frame = +1

Query: 166 SEFYQFQVKDIDGKNFKLSSLKDKAVLVVNLASACGFTPQYAELQDLQDKYGKQGFVVLG 345
           +  Y F  K + GK+  L   + K +L+VN ASACGFTPQY  L+ LQ+KYG +GF VLG
Sbjct: 2   ASIYDFTAKSLVGKDVSLKQFEGKVLLIVNTASACGFTPQYKGLEALQEKYGPRGFSVLG 61

Query: 346 FPCNQFGAQEPGSNQTIKQFAKSNYGVTFPLMSKVDVNGPGAEPLFDWLKTQ 501
           FPCNQFGAQEPG    I QF  +NYGVTFP+ +K+DVNG GA PL+ +LK +
Sbjct: 62  FPCNQFGAQEPGDEAQIAQFCSTNYGVTFPMFAKIDVNGAGAHPLYKFLKDE 113

>ref|NP_596146.1| glutathione peroxidase [Schizosaccharomyces pombe]
           gi|6225487|sp|O59858|GPX1_SCHPO Glutathione peroxidase
           gi|11255600|pir||T43376 glutathione peroxidase (EC
           1.11.1.9) [similarity] - fission yeast
           (Schizosaccharomyces pombe) gi|2992162|dbj|BAA25326.1|
           glutathione peroxidase [Schizosaccharomyces pombe]
           gi|3192035|emb|CAA19364.1| SPBC32F12.03c
           [Schizosaccharomyces pombe]
          Length = 158

 Score =  141 bits (355), Expect = 5e-33
 Identities = 64/112 (57%), Positives = 82/112 (73%)
 Frame = +1

Query: 166 SEFYQFQVKDIDGKNFKLSSLKDKAVLVVNLASACGFTPQYAELQDLQDKYGKQGFVVLG 345
           S FY    KD DG  F  S+LK K VLVVN AS CGFTPQY  L+ L  KY  +GF++LG
Sbjct: 2   SHFYDLAPKDKDGNPFPFSNLKGKVVLVVNTASKCGFTPQYKGLEALYQKYKDRGFIILG 61

Query: 346 FPCNQFGAQEPGSNQTIKQFAKSNYGVTFPLMSKVDVNGPGAEPLFDWLKTQ 501
           FPCNQFG QEPGS++ I QF + NYGVTFP+++K++VNG   +P++ +LK+Q
Sbjct: 62  FPCNQFGNQEPGSDEEIAQFCQKNYGVTFPVLAKINVNGDNVDPVYQFLKSQ 113

>ref|NP_012303.1| Hydroperoxide resistance conferring gene. Sensor and transducer of
           the hydroperoxide signal to Yap1. Hydroperoxide receptor
           and redox-transducer.; Hyr1p [Saccharomyces cerevisiae]
           gi|729640|sp|P40581|GPX3_YEAST Glutathione peroxidase 3
           gi|626388|pir||S48499 glutathione peroxidase (EC
           1.11.1.9) HYR1 [similarity] - yeast (Saccharomyces
           cerevisiae) gi|557843|emb|CAA86197.1| unnamed protein
           product [Saccharomyces cerevisiae]
           gi|727367|gb|AAA64283.1| Hyr1p
          Length = 163

 Score =  137 bits (346), Expect = 6e-32
 Identities = 62/112 (55%), Positives = 81/112 (71%)
 Frame = +1

Query: 166 SEFYQFQVKDIDGKNFKLSSLKDKAVLVVNLASACGFTPQYAELQDLQDKYGKQGFVVLG 345
           SEFY+    D  G+ F    LK K VL+VN+AS CGFTPQY EL+ L  +Y  +GF ++G
Sbjct: 2   SEFYKLAPVDKKGQPFPFDQLKGKVVLIVNVASKCGFTPQYKELEALYKRYKDEGFTIIG 61

Query: 346 FPCNQFGAQEPGSNQTIKQFAKSNYGVTFPLMSKVDVNGPGAEPLFDWLKTQ 501
           FPCNQFG QEPGS++ I QF + NYGVTFP+M K+DVNG   +P++ +LK+Q
Sbjct: 62  FPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGGNEDPVYKFLKSQ 113

>ref|NP_812882.1| glutathione peroxidase [Bacteroides thetaiotaomicron VPI-5482]
           gi|29341288|gb|AAO79076.1| glutathione peroxidase
           [Bacteroides thetaiotaomicron VPI-5482]
          Length = 180

 Score =  137 bits (345), Expect = 8e-32
 Identities = 64/107 (59%), Positives = 75/107 (69%)
 Frame = +1

Query: 172 FYQFQVKDIDGKNFKLSSLKDKAVLVVNLASACGFTPQYAELQDLQDKYGKQGFVVLGFP 351
           FY F V  IDGK F LSSLK K VLVVN+AS CG TPQYA+LQ+L DKY  + FV++GFP
Sbjct: 24  FYDFNVTTIDGKEFPLSSLKGKKVLVVNVASKCGLTPQYAKLQELYDKYKDKNFVIIGFP 83

Query: 352 CNQFGAQEPGSNQTIKQFAKSNYGVTFPLMSKVDVNGPGAEPLFDWL 492
            N F  QEPGSN+ I QF    Y VTFP+M+K+ V G    PL+ WL
Sbjct: 84  ANNFMGQEPGSNEEIAQFCSLKYDVTFPMMAKISVKGKNMSPLYQWL 130



EST assemble image


clone accession position
1 LC089d10_r AV625216 1 503
2 HC076a06_r AV637669 13 422




Chlamydomonas reinhardtii
Kazusa DNA Research Institute