KCC002101A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002101A_C01 KCC002101A_c01
CCCTGCTTTTACTTGCGCACCTCAGCCCGCAAGCAAAAGGGTCAACTGCCCGACCCGCAA
GACATCGACATCGCAACTTCTGCAAGCTCGCGCATACGCGCTAAGCTCTCGCTTCCGCCT
GCATACCTCCTCAGCGGCAAAAATGGTTGACCCCAGCCCCGCGGAGCTTGACGATATCAA
GCTGGCCGCGCAGAAGCTGTGGACCCTGGACGAAAACCGCCTCAAGCCCGGCGTCGACTA
TGCCGTCAACCTGCAGAGCGGCAAGTCGATGTGGCAGAAGGGTGACGCGGCCTCCGACAA
GCTCTTCAAGGGCGTGAAGAAGGACACGTGGACTAAGCCCACCTACGTCATCTTCTACAA
CTTGCTTGACAATTACGAGCGCGAGACGGGCGTGTCGGAGTCGGAGACGGCGCAGGAGAA
GAAGGAGGTCAACGATTTCCTGGATGCCTGCCTGCGCACCAAGGTCATGCAGTACGCGCA
CAAATACTGCGCGGAGCGGGGCGTGGCGCCGGCGGACGCGGCGGGATTCAAGAAGGTCCT
GCAGCAGATGTGGTTCAGCTACTACCGCCGCGACGGCGGGGGCAACGACTCGTGCGGCTT
CGAGCACGTGTTCGTGGGCGAGAGCAAGGGCGAGTCCATCACCGGATTCCACAACTGGAT
CCAGTTCTACATCGAGGAGGGCCGCGGCAACGTGGACTACCTGGGCTACGTGCGCCCCAA
GTACGGCCGCGATGCGGCGGACGACGAGGACCGCCTGATCAGCGTGCAGTTCGCGTGGAA
GGGCGAGGAGAAGAACGTCTCCACCTTCTTCGTGGGCACGTCTCCCGAGTTCGAGCTGGC
CCTGTACACGATGTGCTTCCTGTGCAGCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002101A_C01 KCC002101A_c01
         (869 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAO72617.1| putative serine protease-like protein [Oryza sati...   233  4e-60
gb|AAM13204.1| putative serine protease-like protein [Arabidopsi...   226  4e-58
emb|CAE04270.1| OSJNBb0103I08.16 [Oryza sativa (japonica cultiva...   214  1e-54
emb|CAD45344.1| endoU protein [Xenopus laevis]                        201  1e-50
ref|NP_492590.1| placental protein 11 like precursor (1K322) [Ca...   161  1e-38

>gb|AAO72617.1| putative serine protease-like protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 303

 Score =  233 bits (593), Expect = 4e-60
 Identities = 113/244 (46%), Positives = 150/244 (61%), Gaps = 6/244 (2%)
 Frame = +2

Query: 146 VDPSPAELDDIKLAAQKLWTLDENRLKPGVDYAVNLQSGKSMWQKGDAASDKLFKGVKKD 325
           V+P+  EL+ +  A  +LW LD NRL PG DY +    GK ++QKGD AS+ LF  +  D
Sbjct: 23  VEPTREELNSLSRACSRLWELDMNRLTPGKDYRIECGEGKKVYQKGDMASETLFSWLGDD 82

Query: 326 TWTKPTYVIFYNLLDNYERETGVSESETAQEKKEVNDFLDACLRTKVMQYAHKYCAERGV 505
              KPTY  F  LLDNY    G  E  T Q+K E   F++   RT  ++Y H+Y   +GV
Sbjct: 83  VLRKPTYSRFCALLDNYNPHQGYKEVVTQQDKHEEVAFIEEIARTAPIKYLHRYLVLKGV 142

Query: 506 APADAAGFKKVLQQMWFSYYRRDGGGNDSCGFEHVFVGESKG------ESITGFHNWIQF 667
           A  D   FK++L  +WF  Y R G  + S  FEHVFVGE KG        ++GFHNWIQF
Sbjct: 143 ASQDYEDFKRMLTSLWFDLYGRGGSSSSSSAFEHVFVGEIKGRRGQGENEVSGFHNWIQF 202

Query: 668 YIEEGRGNVDYLGYVRPKYGRDAADDEDRLISVQFAWKGEEKNVSTFFVGTSPEFELALY 847
           Y+EE  GNVDY GY+ P+   ++ D E +L+++QF W G  K+VS+  +G SPEFE+ALY
Sbjct: 203 YLEEANGNVDYQGYIFPRRRGESPDSETQLLTIQFEWHGVLKSVSSTLIGVSPEFEVALY 262

Query: 848 TMCF 859
           T+CF
Sbjct: 263 TLCF 266

>gb|AAM13204.1| putative serine protease-like protein [Arabidopsis thaliana]
           gi|23197988|gb|AAN15521.1| putative serine protease-like
           protein [Arabidopsis thaliana]
          Length = 434

 Score =  226 bits (576), Expect = 4e-58
 Identities = 110/241 (45%), Positives = 148/241 (60%), Gaps = 3/241 (1%)
 Frame = +2

Query: 146 VDPSPAELDDIKLAAQKLWTLDENRLKPGVDYAVNLQSGKSMWQKGDAASDKLFKGVKKD 325
           ++PS  EL  +  A  KLW LD NRL PG DY ++   GK + ++ D A   LF  V ++
Sbjct: 157 LEPSQLELSGLSEACNKLWELDLNRLVPGRDYQIDCGDGKRVHERADMAEGLLFSWVSEE 216

Query: 326 TWTKPTYVIFYNLLDNYERETGVSESETAQEKKEVNDFLDACLRTKVMQYAHKYCAERGV 505
              KPT+  F +LLDNY    G  E  T +E++E   F++   RT V++Y H+Y   + V
Sbjct: 217 VSRKPTFARFCSLLDNYNPNEGYKEVVTEEERQEQAAFIEEISRTSVIKYLHRYLVLKDV 276

Query: 506 APADAAGFKKVLQQMWFSYYRRDGGGNDSCGFEHVFVGESK---GESITGFHNWIQFYIE 676
           AP     FK++L  +WF  Y R G    S  FEHVFVGE K   GE ++GFHNW+QFY+E
Sbjct: 277 APGSYLEFKRMLTSLWFDLYGRGGTSGSSSAFEHVFVGEIKQSGGEQVSGFHNWLQFYLE 336

Query: 677 EGRGNVDYLGYVRPKYGRDAADDEDRLISVQFAWKGEEKNVSTFFVGTSPEFELALYTMC 856
           E +G VDY GY+ P+   +  D E +L+++QF W G  K+VS+  VG SPEFELALYTMC
Sbjct: 337 EAKGTVDYQGYIFPRRRGEIPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTMC 396

Query: 857 F 859
           F
Sbjct: 397 F 397

>emb|CAE04270.1| OSJNBb0103I08.16 [Oryza sativa (japonica cultivar-group)]
          Length = 479

 Score =  214 bits (546), Expect = 1e-54
 Identities = 107/238 (44%), Positives = 144/238 (59%)
 Frame = +2

Query: 146 VDPSPAELDDIKLAAQKLWTLDENRLKPGVDYAVNLQSGKSMWQKGDAASDKLFKGVKKD 325
           V+P+  EL+ +  A  +LW LD NRL PG DY +    GK ++QKGD AS+ LF  +  D
Sbjct: 208 VEPTREELNSLSRACSRLWELDMNRLTPGKDYRIECGEGKKVYQKGDMASETLFSWLGDD 267

Query: 326 TWTKPTYVIFYNLLDNYERETGVSESETAQEKKEVNDFLDACLRTKVMQYAHKYCAERGV 505
              KPTY  F  LLDNY    G  E  T Q+K E   F++   RT  ++Y H+Y   +GV
Sbjct: 268 VLRKPTYSRFCALLDNYNPHQGYKEVVTQQDKHEEVAFIEEIARTAPIKYLHRYLVLKGV 327

Query: 506 APADAAGFKKVLQQMWFSYYRRDGGGNDSCGFEHVFVGESKGESITGFHNWIQFYIEEGR 685
           A  D   FK++L  +WF  Y R G  + S  FEHVFVGE KG    G +   +FY+EE  
Sbjct: 328 ASQDYEDFKRMLTSLWFDLYGRGGSSSSSSAFEHVFVGEIKGRRGQGEN---EFYLEEAN 384

Query: 686 GNVDYLGYVRPKYGRDAADDEDRLISVQFAWKGEEKNVSTFFVGTSPEFELALYTMCF 859
           GNVDY GY+ P+   ++ D E +L+++QF W G  K+VS+  +G SPEFE+ALYT+CF
Sbjct: 385 GNVDYQGYIFPRRRGESPDSETQLLTIQFEWHGVLKSVSSTLIGVSPEFEVALYTLCF 442

>emb|CAD45344.1| endoU protein [Xenopus laevis]
          Length = 292

 Score =  201 bits (511), Expect = 1e-50
 Identities = 109/234 (46%), Positives = 149/234 (63%), Gaps = 9/234 (3%)
 Frame = +2

Query: 194 KLWTLDENRLKPGVDYAVNLQSGKSMW------QKGDAASDKLFKGVKKDTW-TKPTYVI 352
           +LW  D+NR+K G DY ++LQ GK+ +      Q  D+AS  LF+ V ++   ++ T+  
Sbjct: 18  ELWDADQNRMKSGKDYRISLQ-GKAGYVPAGSNQARDSASFPLFQFVDEEKLKSRKTFAT 76

Query: 353 FYNLLDNYERETGVSESETAQEKKEVNDFLDACLRTKVMQYAHKYCAERGVAPADAAGFK 532
           F +LLDNYE +TGV+E  T +E  E N+FLDA L TKVM+ AH Y   +  A      FK
Sbjct: 77  FISLLDNYEMDTGVAEVVTPEEIAENNNFLDAILETKVMKMAHDYLVRKNQAKPTRNDFK 136

Query: 533 KVLQQMWFSYYRRDGGGN-DSCGFEHVFVGESK-GESITGFHNWIQFYIEEGRGNVDYLG 706
             L  +WF  Y R  G   DSCGFEHVFVGESK G+ + G HNW+QFY++E R N+DY G
Sbjct: 137 VQLYNIWFQLYSRAPGSRPDSCGFEHVFVGESKRGQEMMGLHNWVQFYLQEKRKNIDYKG 196

Query: 707 YVRPKYGRDAADDEDRLISVQFAWKGEEKNVSTFFVGTSPEFELALYTMCFLCS 868
           YV  +  +   D++D+++++QF WK   K V + F+G SPEFE ALYT+ FL S
Sbjct: 197 YV-ARQNKSRPDEDDQVLNLQFNWKEMVKPVGSSFIGVSPEFEFALYTIVFLAS 249

>ref|NP_492590.1| placental protein 11 like precursor (1K322) [Caenorhabditis
           elegans] gi|7505098|pir||T23212 hypothetical protein
           K02A11.3 - Caenorhabditis elegans
           gi|3878154|emb|CAA99880.1| Hypothetical protein K02A11.3
           [Caenorhabditis elegans]
          Length = 307

 Score =  161 bits (408), Expect = 1e-38
 Identities = 92/230 (40%), Positives = 129/230 (56%), Gaps = 5/230 (2%)
 Frame = +2

Query: 188 AQKLWTLDENRLKPGVDYAVNLQSGKSMWQKGDAASDKLFKGVKKDTWTKPTYVIFYNLL 367
           AQKL  +D NR +P     +N Q         DAA  KLF  V    + KP+Y ++ NL+
Sbjct: 34  AQKLRQVDTNRARPD-QIKLNYQGHTVTRDDSDAAQAKLFSKVDTSLFRKPSYELYINLM 92

Query: 368 DNYERETGVSESETAQ--EKKEVNDFLDACLRTKVMQYAHKYCAERGVAPADAAG-FKKV 538
           DN+ R+TGV E   +Q  EK EV  FLD  L ++ MQ  + +   +G   A +   F+  
Sbjct: 93  DNFNRQTGVIEPRVSQAEEKNEVGKFLDYVLESRPMQELYNWFKAKGHPIATSPQVFRFW 152

Query: 539 LQQMWFSYYRRDGGGNDSCGFEHVFVGESKGESITGFHNWIQFYIEEGR--GNVDYLGYV 712
           + Q+WFS+Y R  G  D+ GFEHVF+GE+K   I+G HNW++FY+ E     N DY G+ 
Sbjct: 153 IGQLWFSHYSRALGRPDTSGFEHVFIGEAKNGEISGMHNWVRFYVLENNRTENFDYKGFT 212

Query: 713 RPKYGRDAADDEDRLISVQFAWKGEEKNVSTFFVGTSPEFELALYTMCFL 862
             ++   AA        ++F W G  K   +  +GTSPEF++ALYTMCFL
Sbjct: 213 VKRFNIMAA--------LKFTWDGLLKRAGSILIGTSPEFDMALYTMCFL 254



EST assemble image


clone accession position
1 HC076c09_r AV637690 1 624
2 LC085e11_r AV624999 15 581
3 MX256c09_r BP092584 108 604
4 HC071a11_r AV637280 116 538
5 LC036f04_r AV621473 418 974




Chlamydomonas reinhardtii
Kazusa DNA Research Institute