Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002094A_C01 KCC002094A_c01
(540 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana] 57 2e-07
gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana] 57 2e-07
pir||B84546 probable splicing factor [imported] - Arabidopsis th... 57 2e-07
ref|NP_565399.1| RNA recognition motif (RRM)-containing protein ... 57 2e-07
gb|AAP53959.1| putative splicing factor-like protein [Oryza sati... 54 1e-06
>gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana]
Length = 420
Score = 56.6 bits (135), Expect = 2e-07
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +3
Query: 210 GFVYLRYSSTQAAEAAHRALHGRWYGGRQIVAEYQFAQVYNTHFKLSK 353
GFVYLR+ + QAA A RALHGRW+ G+ I A Y + Y F SK
Sbjct: 371 GFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKFPESK 418
>gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 56.6 bits (135), Expect = 2e-07
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +3
Query: 210 GFVYLRYSSTQAAEAAHRALHGRWYGGRQIVAEYQFAQVYNTHFKLSK 353
GFVYLR+ + QAA A RALHGRW+ G+ I A Y + Y F SK
Sbjct: 511 GFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKFPESK 558
>pir||B84546 probable splicing factor [imported] - Arabidopsis thaliana
Length = 600
Score = 56.6 bits (135), Expect = 2e-07
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +3
Query: 210 GFVYLRYSSTQAAEAAHRALHGRWYGGRQIVAEYQFAQVYNTHFKLSK 353
GFVYLR+ + QAA A RALHGRW+ G+ I A Y + Y F SK
Sbjct: 551 GFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKFPESK 598
>ref|NP_565399.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana] gi|20197280|gb|AAC64224.2| putative splicing
factor [Arabidopsis thaliana]
Length = 561
Score = 56.6 bits (135), Expect = 2e-07
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +3
Query: 210 GFVYLRYSSTQAAEAAHRALHGRWYGGRQIVAEYQFAQVYNTHFKLSK 353
GFVYLR+ + QAA A RALHGRW+ G+ I A Y + Y F SK
Sbjct: 512 GFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKFPESK 559
>gb|AAP53959.1| putative splicing factor-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 549
Score = 53.9 bits (128), Expect = 1e-06
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = +3
Query: 210 GFVYLRYSSTQAAEAAHRALHGRWYGGRQIVAEYQFAQVYNTHF 341
GFVYL + S AA AA RALHGRW+ G+ I A + AQ Y F
Sbjct: 504 GFVYLHFDSVAAATAAQRALHGRWFAGKMITATFMTAQQYKMKF 547
