Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002090A_C01 KCC002090A_c01
(678 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL67588.1|AC018929_10 putative hydroxyproline-rich glycoprot... 37 0.36
ref|ZP_00059059.1| COG0266: Formamidopyrimidine-DNA glycosylase ... 37 0.36
ref|XP_091623.2| similar to SPPL2b; presenilin-like protein 1 [H... 36 0.61
ref|ZP_00039753.1| COG3250: Beta-galactosidase/beta-glucuronidas... 30 1.2
dbj|BAB89002.1| P0401G10.10 [Oryza sativa (japonica cultivar-gro... 34 1.8
>gb|AAL67588.1|AC018929_10 putative hydroxyproline-rich glycoprotein [Oryza sativa]
gi|31433674|gb|AAP55158.1| putative hydroxyproline-rich
glycoprotein [Oryza sativa (japonica cultivar-group)]
Length = 464
Score = 36.6 bits (83), Expect = 0.36
Identities = 32/127 (25%), Positives = 48/127 (37%)
Frame = -1
Query: 606 KPCARQHQIMPHIINRACVSTASPLASAISAICVINIMNNLEHLFLCTGRSPPPSYESHP 427
+P +R Q P + A+ A +A + + E + P S +H
Sbjct: 182 QPASRGQQARPQHPQGHATAAAAAAAVTPAAAAAAGLQHQQEPV-------PRHSPAAHR 234
Query: 426 LEPVPHSSV*PMHTQIRLSHPHRHAGQATCRKVGGPPRNDAPQPPTRKLNAKRVRERLVP 247
+P+P S P H HPHR PP++ P+PP+ +L R P
Sbjct: 235 GDPLPASPPQPQHQH----HPHRPL----------PPQHQQPKPPSMRLQKIRPPPISTP 280
Query: 246 CARKRPV 226
AR PV
Sbjct: 281 VARPPPV 287
>ref|ZP_00059059.1| COG0266: Formamidopyrimidine-DNA glycosylase [Thermobifida fusca]
Length = 497
Score = 36.6 bits (83), Expect = 0.36
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = -1
Query: 435 SHPLEPVPHSSV*PMHTQIRLSHPHRHAGQATCRKVGGPPRNDAPQPPTRKLNAKRVRER 256
+ P P PH P H + SHPHRH + CR G P + R ++ R R
Sbjct: 10 AEPEHPAPHGGAHPRHRPVVASHPHRH-DRPACRGRGPRPVGSGRRSARRSRGSRGDRHR 68
>ref|XP_091623.2| similar to SPPL2b; presenilin-like protein 1 [Homo sapiens]
Length = 337
Score = 35.8 bits (81), Expect = 0.61
Identities = 19/58 (32%), Positives = 24/58 (40%), Gaps = 5/58 (8%)
Frame = -2
Query: 335 GRWAGLRETTHRSRPHASSMQSVCVRGSCRAHASVP-----CALCASALTARSTPGAF 177
G WAGL E R A RGSCR H + P C +C L+ + P +
Sbjct: 200 GYWAGLTEANRLQRRRARRGGGTAGRGSCRTHWAFPTACSSCTVCGCPLSRTAPPSCW 257
>ref|ZP_00039753.1| COG3250: Beta-galactosidase/beta-glucuronidase [Xylella fastidiosa
Dixon]
Length = 1206
Score = 30.4 bits (67), Expect(2) = 1.2
Identities = 40/151 (26%), Positives = 50/151 (32%), Gaps = 8/151 (5%)
Frame = -1
Query: 465 TGRSPPPSYE----SHPL---EPVPHSSV*PMHT-QIRLSHPHRHAGQATCRKVGGPPRN 310
TG +PPP+ HP P+P P +T Q SHPHR +T + G P
Sbjct: 163 TGITPPPATRHARPQHPRVQRRPIPRLLDRPPNTPQQHTSHPHRRRTPSTQLRPGPRPIQ 222
Query: 309 DAPQPPTRKLNAKRVRERLVPCARKRPVCPLR*RAHSAQHSRRIHNFRRMNNIEQFPA*A 130
T + RL R P R H R IH R + + P
Sbjct: 223 SHSISQTHRTRRTGNPHRLQQKTTGRDPPPAR-----RHHRRTIHPRRPITTDHRRPRPV 277
Query: 129 STARRAESGPCWP*LLTIVSLPRQTFTTQPR 37
T R P T+ R T PR
Sbjct: 278 PTHHRPHPRP------TVCHWSRPTDPRHPR 302
Score = 23.1 bits (48), Expect(2) = 1.2
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 601 MRTPASNHAAHH*QSMRKH 545
+ P S+H HH QS R H
Sbjct: 109 LHRPISHHPPHHSQSSRIH 127
>dbj|BAB89002.1| P0401G10.10 [Oryza sativa (japonica cultivar-group)]
Length = 380
Score = 34.3 bits (77), Expect = 1.8
Identities = 26/85 (30%), Positives = 35/85 (40%)
Frame = -1
Query: 459 RSPPPSYESHPLEPVPHSSV*PMHTQIRLSHPHRHAGQATCRKVGGPPRNDAPQPPTRKL 280
R P PS P P P+ + S P R R+ G P R +P PP R+
Sbjct: 154 RQPDPSPRRRPDSP-------PIRRRADAS-PVRRGDTPPRRRPGSPVRRRSPSPPPRRR 205
Query: 279 NAKRVRERLVPCARKRPVCPLR*RA 205
+ R R P R+R P+R R+
Sbjct: 206 RSPMRRLRGSPSPRRRSPGPIRRRS 230
