Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002085A_C01 KCC002085A_c01
(486 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_002996.1| selectin P precursor; granulocyte membrane prot... 34 0.82
pir||A30359 P-selectin precursor - human 34 0.82
sp|Q14526|HIC1_HUMAN Hypermethylated in cancer 1 protein (Hic-1) 34 1.1
ref|NP_006488.1| hypermethylated in cancer 1 [Homo sapiens] gi|4... 34 1.1
emb|CAC32253.1| hypothetical protein L5213.05 [Leishmania major] 33 1.4
>ref|NP_002996.1| selectin P precursor; granulocyte membrane protein; antigen CD62
[Homo sapiens] gi|126182|sp|P16109|LEM3_HUMAN P-selectin
precursor (Granule membrane protein 140) (GMP-140)
(PADGEM) (CD62P) (Leukocyte-endothelial cell adhesion
molecule 3) (LECAM3) gi|183389|gb|AAA35910.1| granule
membrane protein-140 gi|183391|gb|AAA35911.1| granule
membrane protein-140 (GMP-140) precursor
Length = 830
Score = 34.3 bits (77), Expect = 0.82
Identities = 22/71 (30%), Positives = 29/71 (39%)
Frame = -1
Query: 438 SSCSAACARGVMWLGAERGRCRTGV*RGVWTSHP**CLPALVPPASPLRLPLWSTYALVP 259
S CS C G G + C G+WT+ P CL A PP +P
Sbjct: 224 SQCSFHCTDGYQVNGPSKLECLAS---GIWTNKPPQCLAAQCPPLK------------IP 268
Query: 258 QRTSIIVLHPA 226
+R ++I LH A
Sbjct: 269 ERGNMICLHSA 279
>pir||A30359 P-selectin precursor - human
Length = 830
Score = 34.3 bits (77), Expect = 0.82
Identities = 22/71 (30%), Positives = 29/71 (39%)
Frame = -1
Query: 438 SSCSAACARGVMWLGAERGRCRTGV*RGVWTSHP**CLPALVPPASPLRLPLWSTYALVP 259
S CS C G G + C G+WT+ P CL A PP +P
Sbjct: 224 SQCSFHCTDGYQVNGPSKLECLAS---GIWTNKPPQCLAAQCPPLK------------IP 268
Query: 258 QRTSIIVLHPA 226
+R ++I LH A
Sbjct: 269 ERGNMICLHSA 279
>sp|Q14526|HIC1_HUMAN Hypermethylated in cancer 1 protein (Hic-1)
Length = 733
Score = 33.9 bits (76), Expect = 1.1
Identities = 29/109 (26%), Positives = 40/109 (36%), Gaps = 8/109 (7%)
Frame = -3
Query: 448 VSHLLMQCGVRTWRDVAWCRARS--------VSHRRVTRGLDFTSLVVPACSRAACKPTP 293
+ L+ C R R +C R + R RGL + V+ AC R+ P P
Sbjct: 138 IPDLVALCKKRLKRHGKYCHLRGGGGGGGGYAPYGRPGRGLRAATPVIQACYRSPVGPPP 197
Query: 292 PSALVYVRISSATHVDNSAAPCHVRPDGCGGPHPTHSLALSCRKRSPAC 146
P A + +A H GP P +L S R+ SP C
Sbjct: 198 PPA------AEPPSGPEAAVNTHCAELYASGPGPAAALCASERRCSPLC 240
>ref|NP_006488.1| hypermethylated in cancer 1 [Homo sapiens]
gi|4186166|gb|AAD09201.1| candidate tumor suppressor
HIC-1 [Homo sapiens]
Length = 714
Score = 33.9 bits (76), Expect = 1.1
Identities = 29/109 (26%), Positives = 40/109 (36%), Gaps = 8/109 (7%)
Frame = -3
Query: 448 VSHLLMQCGVRTWRDVAWCRARS--------VSHRRVTRGLDFTSLVVPACSRAACKPTP 293
+ L+ C R R +C R + R RGL + V+ AC R+ P P
Sbjct: 119 IPDLVALCKKRLKRHGKYCHLRGGGGGGGGYAPYGRPGRGLRAATPVIQACYRSPVGPPP 178
Query: 292 PSALVYVRISSATHVDNSAAPCHVRPDGCGGPHPTHSLALSCRKRSPAC 146
P A + +A H GP P +L S R+ SP C
Sbjct: 179 PPA------AEPPSGPEAAVNTHCAELYASGPGPAAALCASERRCSPLC 221
>emb|CAC32253.1| hypothetical protein L5213.05 [Leishmania major]
Length = 1491
Score = 33.5 bits (75), Expect = 1.4
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Frame = -3
Query: 325 ACSRAACKPTPPSALVYVRISSATHVDNSAAPCHVRP--DGCGGPHPTHSLALSCRK--R 158
ACSRAA +PT + + A V +AA R + C PHP A++ ++ R
Sbjct: 1048 ACSRAAQQPT----VTCTHCNHAQSVRGAAAWAGSRGACERCHHPHPRVLAAVTQQRLVR 1103
Query: 157 SPACLVLTSSLDLLLPHTVCT 95
PAC S + PH CT
Sbjct: 1104 CPACQGHVPSTSVQCPHCACT 1124
