Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002084A_C01 KCC002084A_c01
(562 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC23930.1| NADH dehydrogenase subunit 6 [Erpetoichthys cala... 39 0.063
dbj|BAA85377.1| DNA polymerase/reverse transcriptase [Hepatitis ... 35 0.90
pir||D72710 hypothetical protein APE1099 - Aeropyrum pernix (str... 33 2.0
ref|ZP_00123171.1| COG0531: Amino acid transporters [Haemophilus... 33 2.6
ref|NP_032783.1| outer dense fiber of sperm tails 1 [Mus musculu... 33 3.4
>dbj|BAC23930.1| NADH dehydrogenase subunit 6 [Erpetoichthys calabaricus]
Length = 167
Score = 38.5 bits (88), Expect = 0.063
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +3
Query: 174 VLVYGVSLYVLISRIA-ASRPCGYGRAVGSCLMRLRNCSLPRHLCMVLTSFLALKVNAGG 350
V++ S+ LIS IA AS P Y A+G + C + M S + + GG
Sbjct: 2 VMMVVFSVMFLISLIAVASNPSPYFAALGLMIGAGVGCGMLTQFGMTFLSMILFLIYLGG 61
Query: 351 AILPCATTLANACEPYISSKSSLEV 425
++ A + A A EPY S+ SLEV
Sbjct: 62 MLVVFAYSAALAAEPYPSAWGSLEV 86
>dbj|BAA85377.1| DNA polymerase/reverse transcriptase [Hepatitis B virus]
Length = 832
Score = 34.7 bits (78), Expect = 0.90
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = -1
Query: 235 HGREAAIREIRTYKDTPYTSTVNMYPARCGSKQHESQGH----H*RPQTNTRRRSDMCLL 68
H A + + +P +T YPA S+ H S GH H P + R +S+ +
Sbjct: 253 HNTNFASKSASCFYQSPVRTTA--YPAVSTSENHSSSGHAVELHNLPPNSARSQSERPVF 310
Query: 67 L*WLVLLRYAKPCN 26
W + R +KPC+
Sbjct: 311 PCWWLQFRNSKPCS 324
>pir||D72710 hypothetical protein APE1099 - Aeropyrum pernix (strain K1)
gi|5104769|dbj|BAA80084.1| 103aa long hypothetical
protein [Aeropyrum pernix]
Length = 103
Score = 33.5 bits (75), Expect = 2.0
Identities = 18/42 (42%), Positives = 22/42 (51%), Gaps = 3/42 (7%)
Frame = +2
Query: 398 HQQQELAR---SFPTLLGVLVAMTARPLCATWATWAEAPVAA 514
H L+R S PTLLG+ +A L A+WATW P A
Sbjct: 38 HPAPSLSRVSLSLPTLLGLSIATITASLPASWATWLTFPPGA 79
>ref|ZP_00123171.1| COG0531: Amino acid transporters [Haemophilus somnus 129PT]
Length = 436
Score = 33.1 bits (74), Expect = 2.6
Identities = 24/67 (35%), Positives = 34/67 (49%)
Frame = +3
Query: 153 RAGYMLTVLVYGVSLYVLISRIAASRPCGYGRAVGSCLMRLRNCSLPRHLCMVLTSFLAL 332
+AG + YGVSL + + IA S GYG S L+ + + LC + T +LA
Sbjct: 82 KAGNFMANYTYGVSLVIANTAIAISA-VGYG----SELLNVTLSPISIALCTIFTLWLAT 136
Query: 333 KVNAGGA 353
+N GGA
Sbjct: 137 VLNFGGA 143
>ref|NP_032783.1| outer dense fiber of sperm tails 1 [Mus musculus]
gi|2498693|sp|Q61999|ODFP_MOUSE Outer dense fiber
protein gi|2137612|pir||I48699 outer dense fiber protein
- mouse gi|607140|emb|CAA55965.1| outer dense fiber
protein [Mus musculus]
Length = 247
Score = 32.7 bits (73), Expect = 3.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 496 GPCGPCGTQWPCSHCN 449
GPCGPCG PC CN
Sbjct: 216 GPCGPCGPCGPCDPCN 231
