Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002069A_C01 KCC002069A_c01
(437 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00015697.1| COG3476: Tryptophan-rich sensory protein (mit... 76 9e-14
sp|P17057|CRTK_RHOCA CrtK protein gi|79456|pir||S04404 crtK prot... 72 1e-12
gb|AAK31586.1| peripheral-type benzodiazepine receptor [Oncorhyn... 72 2e-12
ref|NP_435830.1| TspO Tryptophan rich sensory protein homologue ... 71 3e-12
gb|AAF01195.1|AF179401_4 TspO [Sinorhizobium meliloti] 71 3e-12
>ref|ZP_00015697.1| COG3476: Tryptophan-rich sensory protein (mitochondrial
benzodiazepine receptor homolog) [Rhodospirillum rubrum]
Length = 188
Score = 76.3 bits (186), Expect = 9e-14
Identities = 36/98 (36%), Positives = 57/98 (57%)
Frame = +2
Query: 143 WYKSLKKPSWTPPNYVFPLVWIPLKTMQSVALWLVCSKAKSVSSLALPLAAFGIHMFLGN 322
WY++++KPSW PP+ VF VW L M +VA WLV A ++ LP+ FG+ + +
Sbjct: 53 WYQTIRKPSWNPPDKVFGPVWGILYIMIAVAGWLVWMTAPFSETMILPMTIFGVQLVMNF 112
Query: 323 WWNVVFFGRRQLEGSLPWMYAFWGSIAASAAAFYPISP 436
W+ +FFG ++++ +L + W S+ AF PI P
Sbjct: 113 LWSGLFFGAKRIDLALLEVSFLWISVIELILAFLPIHP 150
>sp|P17057|CRTK_RHOCA CrtK protein gi|79456|pir||S04404 crtK protein - Rhodobacter
capsulatus gi|46000|emb|CAA36535.1| unnamed protein
product [Rhodobacter capsulatus]
gi|46125|emb|CAA77542.1| 160 aa (17.5 kD) gene product
of crtK [Rhodobacter capsulatus] gi|227041|prf||1613414D
crtK gene
Length = 160
Score = 72.4 bits (176), Expect = 1e-12
Identities = 36/120 (30%), Positives = 56/120 (46%)
Frame = +2
Query: 71 AAGIAASVGVVFGVQRLVPTMDPTWYKSLKKPSWTPPNYVFPLVWIPLKTMQSVALWLVC 250
A A + G +F WY SLKKPSW PPN++FP+ W L + S++ V
Sbjct: 12 ACACAGATGAIFS--------PGAWYDSLKKPSWVPPNWLFPVAWSTLYILMSISAARVS 63
Query: 251 SKAKSVSSLALPLAAFGIHMFLGNWWNVVFFGRRQLEGSLPWMYAFWGSIAASAAAFYPI 430
A L LA + + + + W +FFG +L G + + W S+ A+ F+ +
Sbjct: 64 GLAMENELAVLGLAFWAVQIAVNTLWTPIFFGLHRLAGGMLVLVLLWLSVFATCVLFWSV 123
>gb|AAK31586.1| peripheral-type benzodiazepine receptor [Oncorhynchus mykiss]
Length = 164
Score = 72.0 bits (175), Expect = 2e-12
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +2
Query: 140 TWYKSLKKPSWTPPNYVFPLVWIPLKTMQSVALWLVCSKAKSVSSLA-LPLAAFGIHMFL 316
TWY +L KPSW PPN FP+VW L T +LV + + A +PL +G+ + L
Sbjct: 30 TWYTTLNKPSWRPPNAAFPIVWTTLYTGMGYGSYLVWKECGGFTEDAVVPLGFYGLQLAL 89
Query: 317 GNWWNVVFFGRRQLEGSLPWMYAFWGSIAASAAAFYPIS 433
W +FFG +L+ +L + G++ A+ ++YP++
Sbjct: 90 NWAWTPIFFGAHKLKMALIEIVMLTGAVGATMVSWYPVN 128
>ref|NP_435830.1| TspO Tryptophan rich sensory protein homologue [Sinorhizobium
meliloti] gi|25311271|pir||H95334 TspO Tryptophan rich
sensory protein homologue [imported] - Sinorhizobium
meliloti (strain 1021) magaplasmid pSymA
gi|14523692|gb|AAK65242.1| TspO Tryptophan rich sensory
protein homologue [Sinorhizobium meliloti]
Length = 180
Score = 71.2 bits (173), Expect = 3e-12
Identities = 37/121 (30%), Positives = 60/121 (49%)
Frame = +2
Query: 71 AAGIAASVGVVFGVQRLVPTMDPTWYKSLKKPSWTPPNYVFPLVWIPLKTMQSVALWLVC 250
A+ AA+ GV+F WYK L KP W PP+++F VW L ++ WLV
Sbjct: 31 ASFAAAATGVIF--------RPGDWYKQLNKPRWRPPDWLFAPVWAVLYASIGLSGWLVW 82
Query: 251 SKAKSVSSLALPLAAFGIHMFLGNWWNVVFFGRRQLEGSLPWMYAFWGSIAASAAAFYPI 430
+A ++ ALPL + + + L W +FFG + + + W +I A+ F+P+
Sbjct: 83 QEA-GIAGAALPLGTYAVQLLLNAAWTPIFFGLHRPGLAAVEIMVLWAAILATTVMFHPV 141
Query: 431 S 433
+
Sbjct: 142 N 142
>gb|AAF01195.1|AF179401_4 TspO [Sinorhizobium meliloti]
Length = 164
Score = 71.2 bits (173), Expect = 3e-12
Identities = 37/121 (30%), Positives = 60/121 (49%)
Frame = +2
Query: 71 AAGIAASVGVVFGVQRLVPTMDPTWYKSLKKPSWTPPNYVFPLVWIPLKTMQSVALWLVC 250
A+ AA+ GV+F WYK L KP W PP+++F VW L ++ WLV
Sbjct: 15 ASFAAAATGVIF--------RPGDWYKQLNKPRWRPPDWLFAPVWAVLYASIGLSGWLVW 66
Query: 251 SKAKSVSSLALPLAAFGIHMFLGNWWNVVFFGRRQLEGSLPWMYAFWGSIAASAAAFYPI 430
+A ++ ALPL + + + L W +FFG + + + W +I A+ F+P+
Sbjct: 67 QEA-GIAGAALPLGTYAVQLLLNAAWTPIFFGLHRPGLAAVEIMVLWAAILATTVMFHPV 125
Query: 431 S 433
+
Sbjct: 126 N 126
