KCC002063A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002063A_C01 KCC002063A_c01
GCGGCAGAGGAGTTCAATGGCCACCGCTGATCATTGGTGCGTGCGTGCAGCAGCGCGCAC
AATAACAAATGAGGCCGGGCGGTGGCATGGCTGTGTTTCCCTTTTGTTCTTAACGGAGAG
GTGCAGGTTTGCTGCGCCCGGGACGTCGGAAGTACGGGCGTGTTTGTTAATCAACAGTTT
CTTTTGCGGATGGATAGGAAAGGAGAGTGGAGATGGAAAGCCGACCGGCGGATGCGTGCC
CTTGGTTTTGGCCCTGCTGTCGGCGAGTCTTTGTACGTCGTCGACGTGCGTGTATGTGTG
CATCTTTGTTTGCAAGTGTGAGTGTGTGCCTGCCAAGGCGTGCGCACGAACCAGTGGAAG
TACGGTAGTGCTGCTATTTGTGTGATTCCGCCGCTACCAGGGTCGCGCGTGGGAACGATT
TGGTACGGTAAGCTGTGCGAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002063A_C01 KCC002063A_c01
         (441 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAD38982.1| hypothetical protein [Homo sapiens]                    36  0.11
gb|AAH54512.1| FLJ13725 protein [Homo sapiens]                         36  0.11
ref|NP_078795.1| hypothetical protein FLJ13725 [Homo sapiens] gi...    36  0.11
dbj|BAC87139.1| unnamed protein product [Homo sapiens]                 36  0.11
gb|AAF24025.1|AF090901_1 PRO0195 [Homo sapiens]                        35  0.23

>emb|CAD38982.1| hypothetical protein [Homo sapiens]
          Length = 948

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 26/77 (33%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
 Frame = -2

Query: 299 THTRTSTTYKDSPTAGPKPRARIRRSAFHLHSPFLSIRKRNC*LTNT-PVLPTSRAQQTC 123
           THT T +TY    T    P      +    H P +S       LT T P L      QT 
Sbjct: 274 THTTTGSTYSAITTTHSAPSPLTHTTTGSTHKPIIST------LTTTGPTLNIIGPVQTT 327

Query: 122 TSPLRTKGKHSHATARP 72
           TSP  T    +H TA P
Sbjct: 328 TSPTHTMPSPTHTTASP 344

>gb|AAH54512.1| FLJ13725 protein [Homo sapiens]
          Length = 941

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 26/77 (33%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
 Frame = -2

Query: 299 THTRTSTTYKDSPTAGPKPRARIRRSAFHLHSPFLSIRKRNC*LTNT-PVLPTSRAQQTC 123
           THT T +TY    T    P      +    H P +S       LT T P L      QT 
Sbjct: 267 THTTTGSTYSAITTTHSAPSPLTHTTTGSTHKPIIST------LTTTGPTLNIIGPVQTT 320

Query: 122 TSPLRTKGKHSHATARP 72
           TSP  T    +H TA P
Sbjct: 321 TSPTHTMPSPTHTTASP 337

>ref|NP_078795.1| hypothetical protein FLJ13725 [Homo sapiens]
           gi|10435826|dbj|BAB14678.1| unnamed protein product
           [Homo sapiens]
          Length = 858

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 26/77 (33%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
 Frame = -2

Query: 299 THTRTSTTYKDSPTAGPKPRARIRRSAFHLHSPFLSIRKRNC*LTNT-PVLPTSRAQQTC 123
           THT T +TY    T    P      +    H P +S       LT T P L      QT 
Sbjct: 184 THTTTGSTYSAITTTHSAPSPLTHTTTGSTHKPIIST------LTTTGPTLNIIGPVQTT 237

Query: 122 TSPLRTKGKHSHATARP 72
           TSP  T    +H TA P
Sbjct: 238 TSPTHTMPSPTHTTASP 254

>dbj|BAC87139.1| unnamed protein product [Homo sapiens]
          Length = 1223

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 26/77 (33%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
 Frame = -2

Query: 299 THTRTSTTYKDSPTAGPKPRARIRRSAFHLHSPFLSIRKRNC*LTNT-PVLPTSRAQQTC 123
           THT T +TY    T    P      +    H P +S       LT T P L      QT 
Sbjct: 549 THTTTGSTYSAITTTHSAPSPLTHTTTGSTHKPIIST------LTTTGPTLNIIGPVQTT 602

Query: 122 TSPLRTKGKHSHATARP 72
           TSP  T    +H TA P
Sbjct: 603 TSPTHTMPSPTHTTASP 619

>gb|AAF24025.1|AF090901_1 PRO0195 [Homo sapiens]
          Length = 72

 Score = 35.0 bits (79), Expect = 0.23
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +2

Query: 239 PLVLALLSASLCTSSTCVYVCIFVCKCECVPAKACARTSGS 361
           P ++  LS  +C     V VC+ VC C CV +K C+ T  S
Sbjct: 36  PTIICYLSVCMC-----VCVCVCVCVCVCVISKLCSSTDSS 71



EST assemble image


clone accession position
1 HC058h08_r AV636394 1 441
2 HC077a05_r AV637749 1 420




Chlamydomonas reinhardtii
Kazusa DNA Research Institute