KCC002063A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC002063A_C01 KCC002063A_c01
GCGGCAGAGGAGTTCAATGGCCACCGCTGATCATTGGTGCGTGCGTGCAGCAGCGCGCAC
AATAACAAATGAGGCCGGGCGGTGGCATGGCTGTGTTTCCCTTTTGTTCTTAACGGAGAG
GTGCAGGTTTGCTGCGCCCGGGACGTCGGAAGTACGGGCGTGTTTGTTAATCAACAGTTT
CTTTTGCGGATGGATAGGAAAGGAGAGTGGAGATGGAAAGCCGACCGGCGGATGCGTGCC
CTTGGTTTTGGCCCTGCTGTCGGCGAGTCTTTGTACGTCGTCGACGTGCGTGTATGTGTG
CATCTTTGTTTGCAAGTGTGAGTGTGTGCCTGCCAAGGCGTGCGCACGAACCAGTGGAAG
TACGGTAGTGCTGCTATTTGTGTGATTCCGCCGCTACCAGGGTCGCGCGTGGGAACGATT
TGGTACGGTAAGCTGTGCGAG
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002063A_C01 KCC002063A_c01
(441 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD38982.1| hypothetical protein [Homo sapiens] 36 0.11
gb|AAH54512.1| FLJ13725 protein [Homo sapiens] 36 0.11
ref|NP_078795.1| hypothetical protein FLJ13725 [Homo sapiens] gi... 36 0.11
dbj|BAC87139.1| unnamed protein product [Homo sapiens] 36 0.11
gb|AAF24025.1|AF090901_1 PRO0195 [Homo sapiens] 35 0.23
>emb|CAD38982.1| hypothetical protein [Homo sapiens]
Length = 948
Score = 36.2 bits (82), Expect = 0.11
Identities = 26/77 (33%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = -2
Query: 299 THTRTSTTYKDSPTAGPKPRARIRRSAFHLHSPFLSIRKRNC*LTNT-PVLPTSRAQQTC 123
THT T +TY T P + H P +S LT T P L QT
Sbjct: 274 THTTTGSTYSAITTTHSAPSPLTHTTTGSTHKPIIST------LTTTGPTLNIIGPVQTT 327
Query: 122 TSPLRTKGKHSHATARP 72
TSP T +H TA P
Sbjct: 328 TSPTHTMPSPTHTTASP 344
>gb|AAH54512.1| FLJ13725 protein [Homo sapiens]
Length = 941
Score = 36.2 bits (82), Expect = 0.11
Identities = 26/77 (33%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = -2
Query: 299 THTRTSTTYKDSPTAGPKPRARIRRSAFHLHSPFLSIRKRNC*LTNT-PVLPTSRAQQTC 123
THT T +TY T P + H P +S LT T P L QT
Sbjct: 267 THTTTGSTYSAITTTHSAPSPLTHTTTGSTHKPIIST------LTTTGPTLNIIGPVQTT 320
Query: 122 TSPLRTKGKHSHATARP 72
TSP T +H TA P
Sbjct: 321 TSPTHTMPSPTHTTASP 337
>ref|NP_078795.1| hypothetical protein FLJ13725 [Homo sapiens]
gi|10435826|dbj|BAB14678.1| unnamed protein product
[Homo sapiens]
Length = 858
Score = 36.2 bits (82), Expect = 0.11
Identities = 26/77 (33%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = -2
Query: 299 THTRTSTTYKDSPTAGPKPRARIRRSAFHLHSPFLSIRKRNC*LTNT-PVLPTSRAQQTC 123
THT T +TY T P + H P +S LT T P L QT
Sbjct: 184 THTTTGSTYSAITTTHSAPSPLTHTTTGSTHKPIIST------LTTTGPTLNIIGPVQTT 237
Query: 122 TSPLRTKGKHSHATARP 72
TSP T +H TA P
Sbjct: 238 TSPTHTMPSPTHTTASP 254
>dbj|BAC87139.1| unnamed protein product [Homo sapiens]
Length = 1223
Score = 36.2 bits (82), Expect = 0.11
Identities = 26/77 (33%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = -2
Query: 299 THTRTSTTYKDSPTAGPKPRARIRRSAFHLHSPFLSIRKRNC*LTNT-PVLPTSRAQQTC 123
THT T +TY T P + H P +S LT T P L QT
Sbjct: 549 THTTTGSTYSAITTTHSAPSPLTHTTTGSTHKPIIST------LTTTGPTLNIIGPVQTT 602
Query: 122 TSPLRTKGKHSHATARP 72
TSP T +H TA P
Sbjct: 603 TSPTHTMPSPTHTTASP 619
>gb|AAF24025.1|AF090901_1 PRO0195 [Homo sapiens]
Length = 72
Score = 35.0 bits (79), Expect = 0.23
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 239 PLVLALLSASLCTSSTCVYVCIFVCKCECVPAKACARTSGS 361
P ++ LS +C V VC+ VC C CV +K C+ T S
Sbjct: 36 PTIICYLSVCMC-----VCVCVCVCVCVCVISKLCSSTDSS 71
EST assemble image
|
|
|
|
clone |
accession |
position |
1 |
HC058h08_r |
AV636394 |
1 |
441 |
2 |
HC077a05_r |
AV637749 |
1 |
420 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute