Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002059A_C01 KCC002059A_c01
(417 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA20035.1| tegument protein [Equine herpesvirus 1] 39 0.017
ref|XP_221871.2| similar to KIAA0774 protein [Rattus norvegicus] 37 0.084
ref|NP_055987.1| HBxAg transactivated protein 2 [Homo sapiens] g... 35 0.32
pir||T47182 hypothetical protein DKFZp434M1616.1 - human (fragme... 35 0.32
ref|NP_851886.1| scaffolding protein [Cercopithecine herpesvirus... 34 0.54
>dbj|BAA20035.1| tegument protein [Equine herpesvirus 1]
Length = 503
Score = 38.9 bits (89), Expect = 0.017
Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 6/114 (5%)
Frame = +1
Query: 43 SAVPGAAMSTSYAVIDSVPCKAAAI------RRAIYTAIQLVRLASHPM*PRHQSHAAPA 204
+A P AA + S A + P K+AA + A A + A+ P +S AAPA
Sbjct: 154 AAAPAAAPAKSAAAPAAAPAKSAAAPAAAPAKSAAAPAAAPAKSAAAPAAAPAKSAAAPA 213
Query: 205 SIPMNLCASSGATSLLLAAKSKMLPAGAKKLFASEPFTPLARGPNAPSSGNART 366
+ P A S A AKS PA A A+ P A+ AP++ A++
Sbjct: 214 AAP----AKSAAAPAAAPAKSAAAPAAAPAKSAAAPAAAPAKSAAAPAAAPAKS 263
Score = 38.5 bits (88), Expect = 0.022
Identities = 35/113 (30%), Positives = 49/113 (42%), Gaps = 6/113 (5%)
Frame = +1
Query: 43 SAVPGAAMSTSYAVIDSVPCKAAAI------RRAIYTAIQLVRLASHPM*PRHQSHAAPA 204
+A P AA + S A + P K+AA + A A + A+ P +S AAPA
Sbjct: 165 AAAPAAAPAKSAAAPAAAPAKSAAAPAAAPAKSAAAPAAAPAKSAAAPAAAPAKSAAAPA 224
Query: 205 SIPMNLCASSGATSLLLAAKSKMLPAGAKKLFASEPFTPLARGPNAPSSGNAR 363
+ P A S A AKS PA A A+ P A+ AP++ A+
Sbjct: 225 AAP----AKSAAAPAAAPAKSAAAPAAAPAKSAAAPAAAPAKSAAAPAAAPAK 273
Score = 32.3 bits (72), Expect = 1.6
Identities = 27/87 (31%), Positives = 38/87 (43%)
Frame = +1
Query: 106 AAAIRRAIYTAIQLVRLASHPM*PRHQSHAAPASIPMNLCASSGATSLLLAAKSKMLPAG 285
AA + A A + A+ P +S AAPA+ P A S A AKS PA
Sbjct: 148 AAPAKSAAAPAAAPAKSAAAPAAAPAKSAAAPAAAP----AKSAAAPAAAPAKSAAAPAA 203
Query: 286 AKKLFASEPFTPLARGPNAPSSGNART 366
A A+ P A+ AP++ A++
Sbjct: 204 APAKSAAAPAAAPAKSAAAPAAAPAKS 230
>ref|XP_221871.2| similar to KIAA0774 protein [Rattus norvegicus]
Length = 576
Score = 36.6 bits (83), Expect = 0.084
Identities = 30/81 (37%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Frame = +1
Query: 175 PRHQSHAAPASIPMNLCASSGAT----SLLLAAKSKMLPAGAKKLFASEPFT--PLARGP 336
P+ AAPAS SS AT SLL A KS PAGAKK +P P P
Sbjct: 39 PKGAGRAAPAS-------SSNATPPRRSLLPAPKSTSTPAGAKKEPQKDPEAKKPAVSSP 91
Query: 337 NAPSSGNARTVQPTITTTASN 399
+S + P + T+A N
Sbjct: 92 KRTASATTKLHSPALFTSAKN 112
>ref|NP_055987.1| HBxAg transactivated protein 2 [Homo sapiens]
gi|5541863|emb|CAB51071.1| hypothetical protein [Homo
sapiens] gi|28629137|gb|AAO49478.1| HBxAg transactivated
protein 2 [Homo sapiens]
Length = 2701
Score = 34.7 bits (78), Expect = 0.32
Identities = 40/131 (30%), Positives = 54/131 (40%), Gaps = 8/131 (6%)
Frame = +1
Query: 46 AVPGAAMSTSYAVIDSVPCKAAAIRRAIYTAIQLVRLASHPM*PRHQSHAAPASIPMNLC 225
A P A +S S +V SVP +A A T+ A P P S + PAS+ +
Sbjct: 1803 ASPLAPVSASASVSASVPASTSA---AAITSSSAPASAPAPT-PILASVSTPASVTILAS 1858
Query: 226 ASSGATSLLLAAKSKMLPAGAKKLFASEPFT--------PLARGPNAPSSGNARTVQPTI 381
AS + LA+ S PA A A+ T P A P AP+S +A PT
Sbjct: 1859 ASIPILASALASTSAPTPAPAASSPAAPVITAPTIPASAPTASVPLAPASASAPAPAPTP 1918
Query: 382 TTTASNFRPGP 414
+ + P P
Sbjct: 1919 VSAPNPAPPAP 1929
>pir||T47182 hypothetical protein DKFZp434M1616.1 - human (fragment)
gi|7328030|emb|CAB82345.1| hypothetical protein [Homo
sapiens]
Length = 1299
Score = 34.7 bits (78), Expect = 0.32
Identities = 40/131 (30%), Positives = 54/131 (40%), Gaps = 8/131 (6%)
Frame = +1
Query: 46 AVPGAAMSTSYAVIDSVPCKAAAIRRAIYTAIQLVRLASHPM*PRHQSHAAPASIPMNLC 225
A P A +S S +V SVP +A A T+ A P P S + PAS+ +
Sbjct: 350 ASPLAPVSASASVSASVPASTSA---AAITSSSAPASAPAPT-PILASVSTPASVTILAS 405
Query: 226 ASSGATSLLLAAKSKMLPAGAKKLFASEPFT--------PLARGPNAPSSGNARTVQPTI 381
AS + LA+ S PA A A+ T P A P AP+S +A PT
Sbjct: 406 ASIPILASALASTSAPTPAPAASSPAAPVITAPTIPASAPTASVPLAPASASAPAPAPTP 465
Query: 382 TTTASNFRPGP 414
+ + P P
Sbjct: 466 VSAPNPAPPAP 476
>ref|NP_851886.1| scaffolding protein [Cercopithecine herpesvirus 1]
gi|28804662|dbj|BAC58066.1| internal protein of immature
capsids [Cercopithecine herpesvirus 1]
gi|30844268|gb|AAP41444.1| scaffolding protein
[Cercopithecine herpesvirus 1]
Length = 309
Score = 33.9 bits (76), Expect = 0.54
Identities = 13/21 (61%), Positives = 16/21 (75%)
Frame = +1
Query: 154 LASHPM*PRHQSHAAPASIPM 216
LA HP PRHQ HA PA++P+
Sbjct: 212 LAHHPPPPRHQPHATPANVPL 232
