KCC002058A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002058A_C01 KCC002058A_c01
gcttcatAGTTCCTTTGCTTCCTCTGTCATATCGCTACCTGTCCAGAAATATGGAGGTCC
TGAAGGAGAACGTTCCTCGTGCGCACGATATGGCTATGAGCGCTGAGAAGCCTCCCGCCA
AGCTGGCACGCGTGGATTTTGAGGAGAAGCTGCTGGTGAAGAAGTTGAACGACAAGGCGA
CGCTGCCCAAGCGCGGCTCGGCAGGCGCGGCGGGCTACGACCTCGCCAGCGCTGAGGACA
CCGTCATTCCCGCCAAGGGCAAGGGCATCGTGAAGACGGGCCTGTCCATCCGCTGCCCCA
AGGGCACTTACGGCCGTGTGGCGCCCCGCTCCGGCCTGGCGGTGAAGAACTTCATCGACA
CCGGCGCCGGCGTCGTGGACGAGGACTACCGCGGCGAGGTTGGCGTCGTGCTGTTCAACC
ACTCGGACGTCGACTTCGTGGTCAAGGTGGGCGACCGTGTGGCTCAGCTGGTGCTGGAGC
GCATCGCCACACCCGACGTGGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002058A_C01 KCC002058A_c01
         (502 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAP44642.1| putative deoxyuridine triphosphatase [Oryza sativ...   167  5e-41
ref|NP_609479.1| CG4584-PA [Drosophila melanogaster] gi|25392170...   161  4e-39
ref|NP_190278.1| dUTP pyrophosphatase-related protein [Arabidops...   159  1e-38
sp|P32518|DUT_LYCES Deoxyuridine 5'-triphosphate nucleotidohydro...   159  2e-38
ref|NP_723647.1| CG4584-PB [Drosophila melanogaster] gi|22946223...   159  2e-38

>gb|AAP44642.1| putative deoxyuridine triphosphatase [Oryza sativa (japonica
           cultivar-group)]
          Length = 225

 Score =  167 bits (424), Expect = 5e-41
 Identities = 83/134 (61%), Positives = 105/134 (77%)
 Frame = +3

Query: 99  SAEKPPAKLARVDFEEKLLVKKLNDKATLPKRGSAGAAGYDLASAEDTVIPAKGKGIVKT 278
           + ++PP K+A+V     L VKKL++ A LP RGSA AAGYDL+SA + V+PA+GK +V T
Sbjct: 73  AVQEPPHKIAKV--APLLKVKKLSENAVLPSRGSALAAGYDLSSAAEVVVPARGKAMVPT 130

Query: 279 GLSIRCPKGTYGRVAPRSGLAVKNFIDTGAGVVDEDYRGEVGVVLFNHSDVDFVVKVGDR 458
            LSI  P+GTY RVAPRSGLA+K+ ID GAGV+D DYRG VGV+LFNHSD DF VK GDR
Sbjct: 131 DLSIAIPEGTYARVAPRSGLALKHSIDVGAGVIDADYRGPVGVILFNHSDTDFAVKPGDR 190

Query: 459 VAQLVLERIATPDV 500
           +AQ+++E I TP+V
Sbjct: 191 IAQMIIEVIVTPEV 204

>ref|NP_609479.1| CG4584-PA [Drosophila melanogaster] gi|25392170|pir||JC7565
           nucleoside-triphosphatase (EC 3.6.1.15) - fruit fly
           (Drosophila melanogaster)
           gi|5679098|gb|AAD46856.1|AF160916_1 BcDNA.LD08534
           [Drosophila melanogaster] gi|7297803|gb|AAF53053.1|
           CG4584-PA [Drosophila melanogaster]
          Length = 188

 Score =  161 bits (408), Expect = 4e-39
 Identities = 85/133 (63%), Positives = 99/133 (73%)
 Frame = +3

Query: 102 AEKPPAKLARVDFEEKLLVKKLNDKATLPKRGSAGAAGYDLASAEDTVIPAKGKGIVKTG 281
           A+ P AK  ++D    L   KL + A  P RGSA AAG DL SA D V+PA+GK IVKT 
Sbjct: 7   ADIPAAKKMKID-TCVLRFAKLTENALEPVRGSAKAAGVDLRSAYDVVVPARGKAIVKTD 65

Query: 282 LSIRCPKGTYGRVAPRSGLAVKNFIDTGAGVVDEDYRGEVGVVLFNHSDVDFVVKVGDRV 461
           L ++ P+G+YGRVAPRSGLAVKNFID GAGVVDEDYRG +GVVLFNHSDVDF VK GDR+
Sbjct: 66  LQVQVPEGSYGRVAPRSGLAVKNFIDVGAGVVDEDYRGNLGVVLFNHSDVDFEVKHGDRI 125

Query: 462 AQLVLERIATPDV 500
           AQ + ERI  P +
Sbjct: 126 AQFICERIFYPQL 138

>ref|NP_190278.1| dUTP pyrophosphatase-related protein [Arabidopsis thaliana]
           gi|7435915|pir||T12954 dUTP pyrophosphatase homolog
           T6H20.30 - Arabidopsis thaliana
           gi|5541665|emb|CAB51171.1| dUTP pyrophosphatase-like
           protein [Arabidopsis thaliana]
           gi|13878143|gb|AAK44149.1|AF370334_1 putative dUTP
           pyrophosphatase [Arabidopsis thaliana]
           gi|17104549|gb|AAL34163.1| putative dUTP pyrophosphatase
           [Arabidopsis thaliana]
          Length = 166

 Score =  159 bits (403), Expect = 1e-38
 Identities = 75/115 (65%), Positives = 94/115 (81%)
 Frame = +3

Query: 156 VKKLNDKATLPKRGSAGAAGYDLASAEDTVIPAKGKGIVKTGLSIRCPKGTYGRVAPRSG 335
           VKKL++KA +P RGS  +AGYDL+SA D+ +PA+GK ++ T LSI  P+GTY R+APRSG
Sbjct: 31  VKKLSEKAVIPTRGSPLSAGYDLSSAVDSKVPARGKALIPTDLSIAVPEGTYARIAPRSG 90

Query: 336 LAVKNFIDTGAGVVDEDYRGEVGVVLFNHSDVDFVVKVGDRVAQLVLERIATPDV 500
           LA K+ ID GAGV+D DYRG VGV+LFNHSD DF VK GDR+AQL++E+I TPDV
Sbjct: 91  LAWKHSIDVGAGVIDADYRGPVGVILFNHSDADFEVKFGDRIAQLIIEKIVTPDV 145

>sp|P32518|DUT_LYCES Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) (dUTP
           pyrophosphatase) (P18) gi|282947|pir||JQ1599 dUTP
           diphosphatase (EC 3.6.1.23) - tomato
           gi|251897|gb|AAB22611.1| deoxyuridine triphosphatase;
           dUTPase; P18 [Lycopersicon esculentum]
          Length = 169

 Score =  159 bits (402), Expect = 2e-38
 Identities = 80/136 (58%), Positives = 102/136 (74%), Gaps = 5/136 (3%)
 Frame = +3

Query: 108 KPPAKLARVDFEEK-----LLVKKLNDKATLPKRGSAGAAGYDLASAEDTVIPAKGKGIV 272
           +P  K+ ++D  E        VKKL++ A LP R S+ AAGYDL+SA +T +PA+GK +V
Sbjct: 13  EPSPKVQKLDHPENGNVPFFRVKKLSENAVLPSRASSLAAGYDLSSAAETKVPARGKALV 72

Query: 273 KTGLSIRCPKGTYGRVAPRSGLAVKNFIDTGAGVVDEDYRGEVGVVLFNHSDVDFVVKVG 452
            T LSI  P+GTY R+APRSGLA K  ID GAGV+D DYRG VGVVLFNHS+VDF VKVG
Sbjct: 73  PTDLSIAVPQGTYARIAPRSGLAWKYSIDVGAGVIDADYRGPVGVVLFNHSEVDFEVKVG 132

Query: 453 DRVAQLVLERIATPDV 500
           DR+AQL++++I TP+V
Sbjct: 133 DRIAQLIVQKIVTPEV 148

>ref|NP_723647.1| CG4584-PB [Drosophila melanogaster] gi|22946223|gb|AAN10772.1|
           CG4584-PB [Drosophila melanogaster]
          Length = 174

 Score =  159 bits (401), Expect = 2e-38
 Identities = 79/113 (69%), Positives = 90/113 (78%)
 Frame = +3

Query: 162 KLNDKATLPKRGSAGAAGYDLASAEDTVIPAKGKGIVKTGLSIRCPKGTYGRVAPRSGLA 341
           KL + A  P RGSA AAG DL SA D V+PA+GK IVKT L ++ P+G+YGRVAPRSGLA
Sbjct: 12  KLTENALEPVRGSAKAAGVDLRSAYDVVVPARGKAIVKTDLQVQVPEGSYGRVAPRSGLA 71

Query: 342 VKNFIDTGAGVVDEDYRGEVGVVLFNHSDVDFVVKVGDRVAQLVLERIATPDV 500
           VKNFID GAGVVDEDYRG +GVVLFNHSDVDF VK GDR+AQ + ERI  P +
Sbjct: 72  VKNFIDVGAGVVDEDYRGNLGVVLFNHSDVDFEVKHGDRIAQFICERIFYPQL 124



EST assemble image


clone accession position
1 HC057b08_r AV636260 1 453
2 LC056c08_r AV622899 8 502




Chlamydomonas reinhardtii
Kazusa DNA Research Institute