Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002054A_C01 KCC002054A_c01
(463 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_071719.1| stromal cell-derived factor 2-like 1 [Mus muscu... 114 5e-25
dbj|BAB18278.1| SDF2 like protein 1 [Mus musculus] 114 5e-25
ref|XP_213377.1| similar to Stromal cell-derived factor 2 precur... 113 9e-25
gb|AAP35590.1| dihydropyrimidinase-like 2 [Homo sapiens] 113 1e-24
gb|AAP36311.1| Homo sapiens dihydropyrimidinase-like 2 [syntheti... 113 1e-24
>ref|NP_071719.1| stromal cell-derived factor 2-like 1 [Mus musculus]
gi|20891899|ref|XP_147210.1| stromal cell-derived factor
2-like 1 [Mus musculus] gi|21542246|sp|Q9ESP1|SDFL_MOUSE
Stromal cell-derived factor 2-like protein 1 precursor
(SDF2 like protein 1) gi|11275387|dbj|BAB18276.1| SDF2
like protein 1 [Mus musculus] gi|31418258|gb|AAH53425.1|
Stromal cell-derived factor 2-like 1 [Mus musculus]
gi|31419686|gb|AAH53438.1| Stromal cell-derived factor
2-like 1 [Mus musculus]
Length = 221
Score = 114 bits (285), Expect = 5e-25
Identities = 55/102 (53%), Positives = 68/102 (65%)
Frame = +2
Query: 158 VVTCGSTIKLQHVATKARLHSHQVAYSRGSQQQSVTGFPDGDDGNSLWLVQGPASEPCVP 337
+VTCGS +KL + K RLHSH + Y GS QQSVTG + DD NS W ++G + C
Sbjct: 35 LVTCGSVLKLLNTHHKVRLHSHDIKYGSGSGQQSVTGVEESDDANSYWRIRGGSEGGCPR 94
Query: 338 GAPLRKGSKLRMLHVSTRKWLHSHLYQSPLSNNQEVSAFGTD 463
G P+R G +R+ HV T K LH+H + SPLSNNQEVSAFG D
Sbjct: 95 GLPVRCGQAVRLTHVLTGKNLHTHHFPSPLSNNQEVSAFGED 136
Score = 39.7 bits (91), Expect = 0.017
Identities = 30/101 (29%), Positives = 44/101 (42%), Gaps = 4/101 (3%)
Frame = +2
Query: 155 LVVTCGSTIKLQHVATKARLHSHQVAYSRGSQQQSVTGFPDGDDGN--SLWLVQGPASEP 328
L V CG ++L HV T LH+H S S Q V+ F + +G+ LW V+
Sbjct: 96 LPVRCGQAVRLTHVLTGKNLHTHHFP-SPLSNNQEVSAFGEDGEGDDLDLWTVR------ 148
Query: 329 CVPGAPLRKGSKLRMLHVSTRKWLH--SHLYQSPLSNNQEV 445
G + + +R HV T +L Y +P+ EV
Sbjct: 149 -CSGQHWEREASVRFQHVGTSVFLSVTGEQYGNPIRGQHEV 188
>dbj|BAB18278.1| SDF2 like protein 1 [Mus musculus]
Length = 221
Score = 114 bits (285), Expect = 5e-25
Identities = 55/102 (53%), Positives = 68/102 (65%)
Frame = +2
Query: 158 VVTCGSTIKLQHVATKARLHSHQVAYSRGSQQQSVTGFPDGDDGNSLWLVQGPASEPCVP 337
+VTCGS +KL + K RLHSH + Y GS QQSVTG + DD NS W ++G + C
Sbjct: 35 LVTCGSVLKLLNTHHKVRLHSHDIKYGSGSGQQSVTGVEESDDANSYWRIRGGSEGGCPR 94
Query: 338 GAPLRKGSKLRMLHVSTRKWLHSHLYQSPLSNNQEVSAFGTD 463
G P+R G +R+ HV T K LH+H + SPLSNNQEVSAFG D
Sbjct: 95 GLPVRCGQAVRLTHVLTGKNLHTHHFPSPLSNNQEVSAFGED 136
Score = 39.7 bits (91), Expect = 0.017
Identities = 30/101 (29%), Positives = 44/101 (42%), Gaps = 4/101 (3%)
Frame = +2
Query: 155 LVVTCGSTIKLQHVATKARLHSHQVAYSRGSQQQSVTGFPDGDDGN--SLWLVQGPASEP 328
L V CG ++L HV T LH+H S S Q V+ F + +G+ LW V+
Sbjct: 96 LPVRCGQAVRLTHVLTGKNLHTHHFP-SPLSNNQEVSAFGEDGEGDDLDLWTVR------ 148
Query: 329 CVPGAPLRKGSKLRMLHVSTRKWLH--SHLYQSPLSNNQEV 445
G + + +R HV T +L Y +P+ EV
Sbjct: 149 -CSGQXWEREASVRFQHVGTSVFLSVTGEQYGNPIRGQHEV 188
>ref|XP_213377.1| similar to Stromal cell-derived factor 2 precursor (SDF-2) [Rattus
norvegicus]
Length = 219
Score = 113 bits (283), Expect = 9e-25
Identities = 59/123 (47%), Positives = 78/123 (62%), Gaps = 2/123 (1%)
Frame = +2
Query: 101 AAAALLLISSVVH-VEADNL-VVTCGSTIKLQHVATKARLHSHQVAYSRGSQQQSVTGFP 274
A +LLL+ + V A N+ VVTCGS +KL ++ RLHSH V Y GS QQSVTG
Sbjct: 10 AVLSLLLLGGLWSAVGASNMAVVTCGSVVKLLNIRHNVRLHSHDVRYGSGSGQQSVTGVT 69
Query: 275 DGDDGNSLWLVQGPASEPCVPGAPLRKGSKLRMLHVSTRKWLHSHLYQSPLSNNQEVSAF 454
DD NS W ++G + C G P++ G +R+ H++T + LHSH + SPLS NQEVSAF
Sbjct: 70 SVDDSNSYWRIRGKTATVCERGTPIKCGQPIRLTHINTGRNLHSHHFTSPLSGNQEVSAF 129
Query: 455 GTD 463
G +
Sbjct: 130 GEE 132
>gb|AAP35590.1| dihydropyrimidinase-like 2 [Homo sapiens]
Length = 619
Score = 113 bits (282), Expect = 1e-24
Identities = 62/141 (43%), Positives = 78/141 (54%)
Frame = +2
Query: 41 LEPCLQHSRGMGQHGLFVAAAAAALLLISSVVHVEADNLVVTCGSTIKLQHVATKARLHS 220
L P S G G V LL+ + +VTCGS +KL + + RLHS
Sbjct: 394 LYPGAMWSAGRGGAAWPVLLGLLLALLVPGGGAAKTGAELVTCGSVLKLLNTHHRVRLHS 453
Query: 221 HQVAYSRGSQQQSVTGFPDGDDGNSLWLVQGPASEPCVPGAPLRKGSKLRMLHVSTRKWL 400
H + Y GS QQSVTG DD NS W ++G + C G+P+R G +R+ HV T K L
Sbjct: 454 HDIKYGSGSGQQSVTGVEASDDANSYWRIRGGSEGGCPRGSPVRCGQAVRLTHVLTGKNL 513
Query: 401 HSHLYQSPLSNNQEVSAFGTD 463
H+H + SPLSNNQEVSAFG D
Sbjct: 514 HTHHFPSPLSNNQEVSAFGED 534
Score = 39.7 bits (91), Expect = 0.017
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 4/99 (4%)
Frame = +2
Query: 161 VTCGSTIKLQHVATKARLHSHQVAYSRGSQQQSVTGFPDGDDGN--SLWLVQGPASEPCV 334
V CG ++L HV T LH+H S S Q V+ F + +G+ LW V+
Sbjct: 496 VRCGQAVRLTHVLTGKNLHTHHFP-SPLSNNQEVSAFGEDGEGDDLDLWTVR-------C 547
Query: 335 PGAPLRKGSKLRMLHVSTRKWLH--SHLYQSPLSNNQEV 445
G + + +R HV T +L Y SP+ EV
Sbjct: 548 SGQHWEREAAVRFQHVGTSVFLSVTGEQYGSPIRGQHEV 586
>gb|AAP36311.1| Homo sapiens dihydropyrimidinase-like 2 [synthetic construct]
Length = 620
Score = 113 bits (282), Expect = 1e-24
Identities = 62/141 (43%), Positives = 78/141 (54%)
Frame = +2
Query: 41 LEPCLQHSRGMGQHGLFVAAAAAALLLISSVVHVEADNLVVTCGSTIKLQHVATKARLHS 220
L P S G G V LL+ + +VTCGS +KL + + RLHS
Sbjct: 394 LYPGAMWSAGRGGAAWPVLLGLLLALLVPGGGAAKTGAELVTCGSVLKLLNTHHRVRLHS 453
Query: 221 HQVAYSRGSQQQSVTGFPDGDDGNSLWLVQGPASEPCVPGAPLRKGSKLRMLHVSTRKWL 400
H + Y GS QQSVTG DD NS W ++G + C G+P+R G +R+ HV T K L
Sbjct: 454 HDIKYGSGSGQQSVTGVEASDDANSYWRIRGGSEGGCPRGSPVRCGQAVRLTHVLTGKNL 513
Query: 401 HSHLYQSPLSNNQEVSAFGTD 463
H+H + SPLSNNQEVSAFG D
Sbjct: 514 HTHHFPSPLSNNQEVSAFGED 534
Score = 39.7 bits (91), Expect = 0.017
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 4/99 (4%)
Frame = +2
Query: 161 VTCGSTIKLQHVATKARLHSHQVAYSRGSQQQSVTGFPDGDDGN--SLWLVQGPASEPCV 334
V CG ++L HV T LH+H S S Q V+ F + +G+ LW V+
Sbjct: 496 VRCGQAVRLTHVLTGKNLHTHHFP-SPLSNNQEVSAFGEDGEGDDLDLWTVR-------C 547
Query: 335 PGAPLRKGSKLRMLHVSTRKWLH--SHLYQSPLSNNQEV 445
G + + +R HV T +L Y SP+ EV
Sbjct: 548 SGQHWEREAAVRFQHVGTSVFLSVTGEQYGSPIRGQHEV 586
