KCC002050A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002050A_C01 KCC002050A_c01
cgccggcgacgtggagcTGCTGAAGAAGCTGCTCGCAGAGGGCGCCAACGCGGACGAGGC
GGACGAGGAGGGCCGCACCGCGCTGCACTTCGCGGCCGGCTACGGCGAGCTGGAGTGCGT
GCGCATGCTCATTGACGCCAAGGCCAAGCTGGACGCGGTGGACACCAACCAGAACACGGC
GCTGCACTACGCCGCCGGCTACGGTCAGGCGGAGAGCGTCAAGATCCTGCTGTCCAGCGG
TGCCGACCGCACCAGCAAGAACCTGGACGGCAAGACGGCGCTGGAGGTGGCGGAGCTGAA
CGAGCAGGCCGACGTCATCGCCGCGCTCAAGGAGGAGGTCAAGGAGGAGGCCAAGGAGGA
GGCCAAGTAAACTGCTTGATCTGGCGGACGGAGCTGTAGCTGTAGCTGTAGCTGGAGTCT
CGCGAGGACCCCGGGCACAGCAACAGCAGGAGCACCGCGGAGCGAGCGGGGCGCAGCTGC
TGGACAGCTGCTGTTTGGCGGCCTGGACCGTGTGGCGCGTGCTGACTAAACGCGGCGGGG
GCCTGCGGCATGCGGCTTGAACTAACGGGCTGGCCGGCAGCCCTAAGGCCGGATGGCAGG
GACAGGCTGGTGACGAATGACGATGCGTATGGCATTGGACACA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002050A_C01 KCC002050A_c01
         (643 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAO32623.1| CR074 protein [Chlamydomonas reinhardtii]              234  6e-61
gb|AAD10949.1| ankyrin repeat-containing protein 2 [Arabidopsis ...   136  3e-31
gb|AAK18619.1|AF352797_1 ankyrin-repeat protein HBP1 [Nicotiana ...   135  5e-31
gb|AAO91861.1| TGB12K interacting protein 2 [Nicotiana tabacum]       134  9e-31
gb|AAO91862.1| TGB12K interacting protein 3 [Nicotiana tabacum]       134  9e-31

>gb|AAO32623.1| CR074 protein [Chlamydomonas reinhardtii]
          Length = 368

 Score =  234 bits (598), Expect = 6e-61
 Identities = 122/122 (100%), Positives = 122/122 (100%)
 Frame = +2

Query: 2   AGDVELLKKLLAEGANADEADEEGRTALHFAAGYGELECVRMLIDAKAKLDAVDTNQNTA 181
           AGDVELLKKLLAEGANADEADEEGRTALHFAAGYGELECVRMLIDAKAKLDAVDTNQNTA
Sbjct: 247 AGDVELLKKLLAEGANADEADEEGRTALHFAAGYGELECVRMLIDAKAKLDAVDTNQNTA 306

Query: 182 LHYAAGYGQAESVKILLSSGADRTSKNLDGKTALEVAELNEQADVIAALKEEVKEEAKEE 361
           LHYAAGYGQAESVKILLSSGADRTSKNLDGKTALEVAELNEQADVIAALKEEVKEEAKEE
Sbjct: 307 LHYAAGYGQAESVKILLSSGADRTSKNLDGKTALEVAELNEQADVIAALKEEVKEEAKEE 366

Query: 362 AK 367
           AK
Sbjct: 367 AK 368

>gb|AAD10949.1| ankyrin repeat-containing protein 2 [Arabidopsis thaliana]
          Length = 342

 Score =  136 bits (342), Expect = 3e-31
 Identities = 67/111 (60%), Positives = 85/111 (76%)
 Frame = +2

Query: 5   GDVELLKKLLAEGANADEADEEGRTALHFAAGYGELECVRMLIDAKAKLDAVDTNQNTAL 184
           GDVE LK  LA G N DE D EGRTALHFA GYGEL+C ++LIDA A ++AVD N+NT L
Sbjct: 229 GDVEGLKAALASGGNKDEEDSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKNKNTPL 288

Query: 185 HYAAGYGQAESVKILLSSGADRTSKNLDGKTALEVAELNEQADVIAALKEE 337
           HYAAGYG+ ESV +LL +GA  T +NLD KT ++VA+LN Q +V+  L+++
Sbjct: 289 HYAAGYGRKESVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLLEKD 339

>gb|AAK18619.1|AF352797_1 ankyrin-repeat protein HBP1 [Nicotiana tabacum]
          Length = 350

 Score =  135 bits (340), Expect = 5e-31
 Identities = 65/112 (58%), Positives = 87/112 (77%)
 Frame = +2

Query: 5   GDVELLKKLLAEGANADEADEEGRTALHFAAGYGELECVRMLIDAKAKLDAVDTNQNTAL 184
           GD E LK  L  GA+ DE D EGRTALHFA GYGE++C ++L++A AK+DA+D N+NTAL
Sbjct: 237 GDAEGLKAALTAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGAKVDALDKNKNTAL 296

Query: 185 HYAAGYGQAESVKILLSSGADRTSKNLDGKTALEVAELNEQADVIAALKEEV 340
           HYAAGYG+ E V +LL +GA  T +NLDGKT ++VA+LN Q +V+  L+++V
Sbjct: 297 HYAAGYGRKECVALLLENGAAVTLQNLDGKTPIDVAKLNNQQEVLKLLEKDV 348

>gb|AAO91861.1| TGB12K interacting protein 2 [Nicotiana tabacum]
          Length = 349

 Score =  134 bits (338), Expect = 9e-31
 Identities = 64/111 (57%), Positives = 87/111 (77%)
 Frame = +2

Query: 5   GDVELLKKLLAEGANADEADEEGRTALHFAAGYGELECVRMLIDAKAKLDAVDTNQNTAL 184
           GD E LK  +A GA+ DE D EGRTALHFA GYGE++C ++L++A AK+DA+D N+NTAL
Sbjct: 236 GDAEGLKSAIATGADKDEEDSEGRTALHFACGYGEVKCAQVLLEAGAKVDALDKNKNTAL 295

Query: 185 HYAAGYGQAESVKILLSSGADRTSKNLDGKTALEVAELNEQADVIAALKEE 337
           HYAAGYG+ E V +LL +GA  T +NLDGKT ++VA+LN Q +V+  L+++
Sbjct: 296 HYAAGYGRKECVALLLENGAAVTLQNLDGKTPIDVAKLNNQNEVLKLLEKD 346

>gb|AAO91862.1| TGB12K interacting protein 3 [Nicotiana tabacum]
          Length = 348

 Score =  134 bits (338), Expect = 9e-31
 Identities = 64/111 (57%), Positives = 87/111 (77%)
 Frame = +2

Query: 5   GDVELLKKLLAEGANADEADEEGRTALHFAAGYGELECVRMLIDAKAKLDAVDTNQNTAL 184
           GD E LK  +A GA+ DE D EGRTALHFA GYGE++C ++L++A AK+DA+D N+NTAL
Sbjct: 235 GDAEGLKNAIATGADKDEEDSEGRTALHFACGYGEVKCAQVLLEAGAKVDALDKNKNTAL 294

Query: 185 HYAAGYGQAESVKILLSSGADRTSKNLDGKTALEVAELNEQADVIAALKEE 337
           HYAAGYG+ E V +LL +GA  T +NLDGKT ++VA+LN Q +V+  L+++
Sbjct: 295 HYAAGYGRKECVALLLENGAAVTVQNLDGKTPIDVAKLNNQNEVLKLLEKD 345



EST assemble image


clone accession position
1 LC042d07_r AV621902 1 526
2 LCL064e08_r AV629721 18 474
3 MX058f11_r BP088364 30 525
4 HC056b02_r AV636174 154 643




Chlamydomonas reinhardtii
Kazusa DNA Research Institute