Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002041A_C01 KCC002041A_c01
(510 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9LSU2|PSA2_ORYSA Proteasome subunit alpha type 2 (20S protea... 191 6e-48
ref|NP_173096.1| 20S proteasome alpha subunit B (PAB1) [Arabidop... 184 6e-46
ref|NP_178042.1| 20S proteasome alpha subunit B, putative [Arabi... 182 2e-45
pir||T02089 proteasome chain - rice gi|2570505|gb|AAB82138.1| pr... 177 9e-44
pir||T01036 hypothetical protein YUP8H12R.19 - Arabidopsis thali... 174 8e-43
>sp|Q9LSU2|PSA2_ORYSA Proteasome subunit alpha type 2 (20S proteasome alpha subunit B)
(20S proteasome subunit alpha-2)
gi|8671494|dbj|BAA96830.1| alpha 2 subunit of 20S
proteasome [Oryza sativa (japonica cultivar-group)]
Length = 235
Score = 191 bits (484), Expect = 6e-48
Identities = 97/122 (79%), Positives = 108/122 (88%)
Frame = +2
Query: 143 MAESQYSFSLTTFSPSGKLVQIEYALNAVAAGATSLGISATDGVVIATEKKLPSALVDET 322
M +SQYSFSLTTFSPSGKLVQIE+AL AV +G TSLGI A +GVVIATEKKLPS LVDET
Sbjct: 1 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDET 60
Query: 323 TVQKIMTITPQIGVVYSGMGPDFRVLVRRARKTAQAYFQTYKEHIPVAQLVRETAAVMQE 502
+VQKI ++TP IGVVYSGMGPDFRVLVR++RK AQ Y++ YKE IPV QLVRETAAVMQE
Sbjct: 61 SVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQE 120
Query: 503 FT 508
FT
Sbjct: 121 FT 122
>ref|NP_173096.1| 20S proteasome alpha subunit B (PAB1) [Arabidopsis thaliana]
gi|6093778|sp|O23708|PSA2_ARATH Proteasome subunit alpha
type 2 (20S proteasome alpha subunit B)
gi|25290062|pir||T51968 C 3.4.25.1 proteasome
endopeptidase complex () chain PAB1 [imported] -
Arabidopsis thaliana gi|2511574|emb|CAA73619.1|
multicatalytic endopeptidase [Arabidopsis thaliana]
gi|3421075|gb|AAC32056.1| 20S proteasome subunit PAB1
[Arabidopsis thaliana]
gi|4966368|gb|AAD34699.1|AC006341_27 Identical to
gb|Y13176 Arabidopsis thaliana mRNA for proteasome
subunit prc3. ESTs gb|H36972, gb|T22551 and gb|T13800
come from this gene gi|12083342|gb|AAG48830.1|AF332467_1
putative multicatalytic endopeptidase [Arabidopsis
thaliana] gi|21617900|gb|AAM66950.1| multicatalytic
endopeptidase [Arabidopsis thaliana]
Length = 235
Score = 184 bits (467), Expect = 6e-46
Identities = 94/122 (77%), Positives = 105/122 (86%)
Frame = +2
Query: 143 MAESQYSFSLTTFSPSGKLVQIEYALNAVAAGATSLGISATDGVVIATEKKLPSALVDET 322
M +SQYSFSLTTFSPSGKLVQIE+AL AV +G TSLGI A++GVVIATEKKLPS LVDE
Sbjct: 1 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEA 60
Query: 323 TVQKIMTITPQIGVVYSGMGPDFRVLVRRARKTAQAYFQTYKEHIPVAQLVRETAAVMQE 502
+VQKI +TP IGVVYSGMGPDFRVLVR++RK A+ Y + YKE IPV QLVRETA VMQE
Sbjct: 61 SVQKIQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQE 120
Query: 503 FT 508
FT
Sbjct: 121 FT 122
>ref|NP_178042.1| 20S proteasome alpha subunit B, putative [Arabidopsis thaliana]
gi|20453128|gb|AAM19806.1| At1g79210/YUP8H12R_1
[Arabidopsis thaliana] gi|21689609|gb|AAM67426.1|
At1g79210/YUP8H12R_1 [Arabidopsis thaliana]
Length = 235
Score = 182 bits (463), Expect = 2e-45
Identities = 93/122 (76%), Positives = 104/122 (85%)
Frame = +2
Query: 143 MAESQYSFSLTTFSPSGKLVQIEYALNAVAAGATSLGISATDGVVIATEKKLPSALVDET 322
M +SQYSFSLTTFSPSGKLVQIE+AL AV +G TSLGI A++GVVIATEKKLPS LVDE
Sbjct: 1 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEA 60
Query: 323 TVQKIMTITPQIGVVYSGMGPDFRVLVRRARKTAQAYFQTYKEHIPVAQLVRETAAVMQE 502
+VQKI +TP IG VYSGMGPDFRVLVR++RK A+ Y + YKE IPV QLVRETA VMQE
Sbjct: 61 SVQKIQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQE 120
Query: 503 FT 508
FT
Sbjct: 121 FT 122
>pir||T02089 proteasome chain - rice gi|2570505|gb|AAB82138.1| proteasome
component [Oryza sativa]
Length = 261
Score = 177 bits (448), Expect = 9e-44
Identities = 90/122 (73%), Positives = 103/122 (83%)
Frame = +2
Query: 143 MAESQYSFSLTTFSPSGKLVQIEYALNAVAAGATSLGISATDGVVIATEKKLPSALVDET 322
M +SQYSFSLTTFSPSGKLVQI +AL AV +G TSLGI A +GV +ATEKKLPS LVDET
Sbjct: 1 MGDSQYSFSLTTFSPSGKLVQINHALTAVGSGQTSLGIKAANGVFVATEKKLPSILVDET 60
Query: 323 TVQKIMTITPQIGVVYSGMGPDFRVLVRRARKTAQAYFQTYKEHIPVAQLVRETAAVMQE 502
+VQKI ++TP +GVVYSGMGPDFRVLVR++ K AQ + YKE +PV QLVRETAAVMQE
Sbjct: 61 SVQKIQSLTPNVGVVYSGMGPDFRVLVRKSPKQAQQCCRLYKETMPVTQLVRETAAVMQE 120
Query: 503 FT 508
FT
Sbjct: 121 FT 122
>pir||T01036 hypothetical protein YUP8H12R.19 - Arabidopsis thaliana
gi|3152562|gb|AAC17043.1| Similar to proteosome
component, micropain (multi-catalytic endopeptidase
complex) subunit Y7, gb|X56731 from S. cerevisiae. EST
gb|Z25719 comes from this gene. [Arabidopsis thaliana]
Length = 225
Score = 174 bits (440), Expect = 8e-43
Identities = 93/134 (69%), Positives = 104/134 (77%), Gaps = 12/134 (8%)
Frame = +2
Query: 143 MAESQYSFSLTTFSPSGKLVQIEYALNAVAAGATSLGISATDGVVIATEKKLPSALVDET 322
M +SQYSFSLTTFSPSGKLVQIE+AL AV +G TSLGI A++GVVIATEKKLPS LVDE
Sbjct: 1 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEA 60
Query: 323 TVQKIMTITPQIGVVYSGMGPDFRVLVRRARKTAQAYFQTYK------------EHIPVA 466
+VQKI +TP IG VYSGMGPDFRVLVR++RK A+ Y + YK E IPV
Sbjct: 61 SVQKIQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKVIFNIFWRLLLQEPIPVT 120
Query: 467 QLVRETAAVMQEFT 508
QLVRETA VMQEFT
Sbjct: 121 QLVRETATVMQEFT 134
