Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002038A_C01 KCC002038A_c01
(552 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_193216.1| 20S proteasome beta subunit D2 (PBD2) [Arabidop... 154 1e-36
ref|NP_188902.1| 20S proteasome beta subunit D (PBD1) [Arabidops... 153 2e-36
gb|AAO19369.1| 20S proteasome beta 4 subunit [Oryza sativa (japo... 149 2e-35
emb|CAC43325.1| putative beta4 proteasome subunit [Nicotiana tab... 147 1e-34
sp|Q9LST6|PSB2_ORYSA Proteasome subunit beta type 2 (20S proteas... 147 1e-34
>ref|NP_193216.1| 20S proteasome beta subunit D2 (PBD2) [Arabidopsis thaliana]
gi|17380180|sp|O24633|PS22_ARATH Proteasome subunit beta
type 2-2 (20S proteasome alpha subunit D2)
gi|7451296|pir||A71411 C 3.4.25.1 proteasome
endopeptidase complex () chain PBD2 [imported] -
Arabidopsis thaliana gi|2244837|emb|CAB10259.1|
proteasome chain protein [Arabidopsis thaliana]
gi|2511572|emb|CAA73618.1| multicatalytic endopeptidase
[Arabidopsis thaliana] gi|3421114|gb|AAC32071.1| 20S
proteasome beta subunit PBD2 [Arabidopsis thaliana]
gi|7268226|emb|CAB78522.1| proteasome chain protein
[Arabidopsis thaliana] gi|21592467|gb|AAM64418.1|
proteasome chain protein [Arabidopsis thaliana]
Length = 199
Score = 154 bits (388), Expect = 1e-36
Identities = 71/129 (55%), Positives = 97/129 (75%)
Frame = +2
Query: 161 MDFFVGIKGKDFVMVCSDTSAAHSIISIKQDEDKIVPIDDHKVFCIAGEAGDRVNFSEYI 340
M+ G+ G F +V +DTSA HSI+ K EDKI+ +D HK+ +GE GDRV F+EY+
Sbjct: 1 MECVFGLVGNGFAIVAADTSAVHSILLHKNKEDKIMTLDSHKLVAASGEPGDRVQFTEYV 60
Query: 341 IANVKLYALRNGTPLNTKSVANYTRGELATALRSSPYHCNLLLAGWDEQAGASLYWMDYL 520
NV LY RNG PL+T + AN+TRGELATALR +PY N+L+AG+D++AGASLY++DY+
Sbjct: 61 QKNVSLYQFRNGIPLSTAAAANFTRGELATALRKNPYSVNILMAGYDKEAGASLYYIDYI 120
Query: 521 ATLNKINTG 547
ATL+K++ G
Sbjct: 121 ATLHKVDKG 129
>ref|NP_188902.1| 20S proteasome beta subunit D (PBD1) [Arabidopsis thaliana]
gi|17380179|sp|O23714|PS21_ARATH Proteasome subunit beta
type 2-1 (20S proteasome alpha subunit D1)
gi|25330487|pir||T51982 C 3.4.25.1 proteasome
endopeptidase complex () beta chain PBD1 [imported] -
Arabidopsis thaliana gi|2511590|emb|CAA74026.1|
multicatalytic endopeptidase complex, proteasome
component, beta subunit [Arabidopsis thaliana]
gi|3421111|gb|AAC32070.1| 20S proteasome beta subunit
PBD1 [Arabidopsis thaliana] gi|11994294|dbj|BAB01477.1|
multicatalytic endopeptidase complex, proteasome
component, beta subunit [Arabidopsis thaliana]
gi|15529250|gb|AAK97719.1| AT3g22630/F16J14_20
[Arabidopsis thaliana] gi|23505793|gb|AAN28756.1|
At3g22630/F16J14_20 [Arabidopsis thaliana]
Length = 204
Score = 153 bits (386), Expect = 2e-36
Identities = 70/129 (54%), Positives = 97/129 (74%)
Frame = +2
Query: 161 MDFFVGIKGKDFVMVCSDTSAAHSIISIKQDEDKIVPIDDHKVFCIAGEAGDRVNFSEYI 340
M+ G+ G F +V +DTSA HSI+ K +EDKI+ +D HK+ +GE GDRV F+EY+
Sbjct: 1 MECVFGLVGNGFAIVAADTSAVHSILLHKNNEDKIMVLDSHKLVAASGEPGDRVQFTEYV 60
Query: 341 IANVKLYALRNGTPLNTKSVANYTRGELATALRSSPYHCNLLLAGWDEQAGASLYWMDYL 520
NV LY RNG PL T + AN+TRGELATALR +PY N+L+AG+D+++GASLY++DY+
Sbjct: 61 QKNVSLYKFRNGIPLTTAAAANFTRGELATALRKNPYSVNILMAGYDDESGASLYYIDYI 120
Query: 521 ATLNKINTG 547
ATL+K++ G
Sbjct: 121 ATLHKVDKG 129
>gb|AAO19369.1| 20S proteasome beta 4 subunit [Oryza sativa (japonica
cultivar-group)]
Length = 212
Score = 149 bits (376), Expect = 2e-35
Identities = 69/129 (53%), Positives = 95/129 (73%)
Frame = +2
Query: 161 MDFFVGIKGKDFVMVCSDTSAAHSIISIKQDEDKIVPIDDHKVFCIAGEAGDRVNFSEYI 340
M+ +G+ G+DF +V +DTSA SI+ K DEDK++ +D HK+ +GE GDRV F+E+I
Sbjct: 1 MECVIGVVGRDFAVVAADTSAVQSILVHKTDEDKVMVLDSHKLMGASGEPGDRVQFTEFI 60
Query: 341 IANVKLYALRNGTPLNTKSVANYTRGELATALRSSPYHCNLLLAGWDEQAGASLYWMDYL 520
N+ LY RN PL+T + AN+TRGELATALR +PY+ N+LLAG+D GASLY++DY+
Sbjct: 61 QKNLHLYQFRNNIPLSTAATANFTRGELATALRKNPYYVNVLLAGYDSDVGASLYYIDYI 120
Query: 521 ATLNKINTG 547
AT +KI G
Sbjct: 121 ATFHKIEKG 129
>emb|CAC43325.1| putative beta4 proteasome subunit [Nicotiana tabacum]
Length = 134
Score = 147 bits (370), Expect = 1e-34
Identities = 68/129 (52%), Positives = 95/129 (72%)
Frame = +2
Query: 161 MDFFVGIKGKDFVMVCSDTSAAHSIISIKQDEDKIVPIDDHKVFCIAGEAGDRVNFSEYI 340
M+ G+ G F +V +D+SA HSI+ K +EDKI+ +D HK+ +GEAGDR F+EY+
Sbjct: 1 MECVFGMVGNGFALVVADSSAVHSILVHKSNEDKIMILDSHKLMGASGEAGDRAQFTEYV 60
Query: 341 IANVKLYALRNGTPLNTKSVANYTRGELATALRSSPYHCNLLLAGWDEQAGASLYWMDYL 520
NV LY RNG PL T + AN+TRGELATALR +PY N++LAG+D++ G SLY++DY+
Sbjct: 61 QKNVALYQFRNGIPLTTAAAANFTRGELATALRKNPYMVNIILAGYDKETGPSLYYVDYI 120
Query: 521 ATLNKINTG 547
ATL+K++ G
Sbjct: 121 ATLHKVDKG 129
>sp|Q9LST6|PSB2_ORYSA Proteasome subunit beta type 2 (20S proteasome alpha subunit D)
(20S proteasome subunit beta-4)
gi|8671508|dbj|BAA96837.1| beta 4 subunit of 20S
proteasome [Oryza sativa (japonica cultivar-group)]
Length = 212
Score = 147 bits (370), Expect = 1e-34
Identities = 68/129 (52%), Positives = 94/129 (72%)
Frame = +2
Query: 161 MDFFVGIKGKDFVMVCSDTSAAHSIISIKQDEDKIVPIDDHKVFCIAGEAGDRVNFSEYI 340
M+ +G+ G+D +V +DTSA SI+ K DEDK++ +D HK+ +GE GDRV F+E+I
Sbjct: 1 MECVIGVVGRDIAVVAADTSAVQSILVHKTDEDKVMVLDSHKLMGASGEPGDRVQFTEFI 60
Query: 341 IANVKLYALRNGTPLNTKSVANYTRGELATALRSSPYHCNLLLAGWDEQAGASLYWMDYL 520
N+ LY RN PL+T + AN+TRGELATALR +PY+ N+LLAG+D GASLY++DY+
Sbjct: 61 QKNLHLYQFRNNIPLSTAATANFTRGELATALRKNPYYVNVLLAGYDSDVGASLYYIDYI 120
Query: 521 ATLNKINTG 547
AT +KI G
Sbjct: 121 ATFHKIEKG 129
