Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002037A_C01 KCC002037A_c01
(795 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM44039.1|AF508965_1 sensory opsin A [Chlamydomonas reinhard... 47 3e-04
gb|AAL08946.1| chlamyopsin 3 precursor [Chlamydomonas reinhardti... 47 3e-04
dbj|BAB68567.1| archaeal-type opsin 2 [Chlamydomonas reinhardtii... 39 0.13
gb|AAG10289.1|AF264944_1 DS07721.6-like protein [Drosophila simu... 35 1.1
gb|AAG10283.1|AF264938_1 DS07721.6-like protein [Drosophila simu... 35 1.8
>gb|AAM44039.1|AF508965_1 sensory opsin A [Chlamydomonas reinhardtii]
gi|21218342|gb|AAM44041.1| sensory opsin A
[Chlamydomonas reinhardtii]
Length = 712
Score = 47.4 bits (111), Expect = 3e-04
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +1
Query: 4 GSEAEMLQQLMSEINRLKNELGE 72
GSEAEMLQQLMSEINRLKNELGE
Sbjct: 690 GSEAEMLQQLMSEINRLKNELGE 712
>gb|AAL08946.1| chlamyopsin 3 precursor [Chlamydomonas reinhardtii]
gi|15823746|dbj|BAB68566.1| archaeal-type opsin 1
[Chlamydomonas reinhardtii]
Length = 712
Score = 47.4 bits (111), Expect = 3e-04
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +1
Query: 4 GSEAEMLQQLMSEINRLKNELGE 72
GSEAEMLQQLMSEINRLKNELGE
Sbjct: 690 GSEAEMLQQLMSEINRLKNELGE 712
>dbj|BAB68567.1| archaeal-type opsin 2 [Chlamydomonas reinhardtii]
gi|20219020|gb|AAM15777.1|AF461397_1 retinal binding
protein [Chlamydomonas reinhardtii]
gi|21218340|gb|AAM44040.1|AF508966_1 sensory opsin B
[Chlamydomonas reinhardtii] gi|21218344|gb|AAM44042.1|
sensory opsin B [Chlamydomonas reinhardtii]
Length = 737
Score = 38.5 bits (88), Expect = 0.13
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1
Query: 7 SEAEMLQQLMSEINRLKNELGE 72
+EAEMLQ LM+EINRLK ELGE
Sbjct: 716 AEAEMLQNLMNEINRLKRELGE 737
>gb|AAG10289.1|AF264944_1 DS07721.6-like protein [Drosophila simulans]
Length = 292
Score = 35.4 bits (80), Expect = 1.1
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = -3
Query: 682 GSNNKSRTRPFSALTFPAINSEPLCSTGSTCRTIAAPRYRNPTSCDHRLRALNPCL 515
GSN+++ P + FP ++ P+ + STC ++P Y+N T D+ PCL
Sbjct: 154 GSNSQN---PNVSTEFPLVDEYPIYNQSSTCTNYSSPEYQNQTVYDYNFTV--PCL 204
>gb|AAG10283.1|AF264938_1 DS07721.6-like protein [Drosophila simulans]
gi|9966480|gb|AAG10284.1|AF264939_1 DS07721.6-like
protein [Drosophila simulans]
gi|9966482|gb|AAG10285.1|AF264940_1 DS07721.6-like
protein [Drosophila simulans]
Length = 292
Score = 34.7 bits (78), Expect = 1.8
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = -3
Query: 682 GSNNKSRTRPFSALTFPAINSEPLCSTGSTCRTIAAPRYRNPTSCDHRLRALNPCL 515
GSN+++ P + FP ++ P+ + STC ++P Y+N T D+ PCL
Sbjct: 154 GSNSQN---PNVSTEFPLVDEYPIYNQSSTCINYSSPEYQNQTVYDYNFTV--PCL 204
