KCC002031A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002031A_C01 KCC002031A_c01
cccttaGATGCCCAAGTTGACTTCAAGTTCAAGCTGTACCATGTATGCATGCCGACCTGA
GTCAACTCCTTTATTGATAGACTAAAGCTATTCGTTTGGTAACGACAAGTATGGAGAAGC
CTGAGAACATAGTAAAGGATGTGGAGAATTATCTCCGGACAACGAATGTTGACAAAGTCG
TCAAGGAGATGGTTGTGTCGGTGCTTCATAACAAACCTGCATCCGTGGAGCAGCACATGT
TGAAGCACCTAGTGGGCAAAGTGAAGCAATCATCAGAGGAGGCGGCCGTCGCCACGGCTG
AGGACGGGTCGGGGGTGGCAGTGGTCCACCCGGACGAGGGCACGCAGGCCTACCTTGCCA
GCAAGGGCGTGGCAGACATCCTCGCCAGCATCGTGCAGCGGCTGGCTGCAGAGCGGCCGG
AGGACGTGCCGGGTTTCATCGCCTCCTACGCCCGCCACCTGCATCAGCACTGACCCTCAC
TGACGGCACGGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002031A_C01 KCC002031A_c01
         (492 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_037506.2| programmed cell death 6 interacting protein; AL...    42  0.004
gb|AAK20398.1|AF349951_1 HP95 [Homo sapiens]                           42  0.004
dbj|BAA92613.1| KIAA1375 protein [Homo sapiens]                        42  0.004
dbj|BAA92092.1| unnamed protein product [Homo sapiens]                 42  0.004
gb|AAF08220.1|AF151793_1 ALG-2 interacting protein 1 [Homo sapiens]    42  0.005

>ref|NP_037506.2| programmed cell death 6 interacting protein; ALG-2 interacting
           protein 1 [Homo sapiens]
           gi|31076831|sp|Q8WUM4|PD6I_HUMAN Programmed cell death 6
           interacting protein (ALG-2 interacting protein 1) (Hp95)
           gi|18042949|gb|AAH20066.1| Programmed cell death 6
           interacting protein [Homo sapiens]
           gi|30583573|gb|AAP36031.1| programmed cell death 6
           interacting protein [Homo sapiens]
          Length = 868

 Score = 42.0 bits (97), Expect = 0.004
 Identities = 27/73 (36%), Positives = 34/73 (45%), Gaps = 14/73 (19%)
 Frame = -1

Query: 375 LPRPCWQGRPA---CPRPGGPLP---PPTRPQPWRRPPPLMI--------ASLCPLGAST 238
           +P P +Q  PA    P P  P P   PPT+PQP  RPPP ++         +  P+GA T
Sbjct: 722 IPTPAYQSSPAGGHAPTPPTPAPRTMPPTKPQPPARPPPPVLPANRAPSATAPSPVGAGT 781

Query: 237 CAAPRMQVCYEAP 199
            A    Q    AP
Sbjct: 782 AAPAPSQTPGSAP 794

>gb|AAK20398.1|AF349951_1 HP95 [Homo sapiens]
          Length = 868

 Score = 42.0 bits (97), Expect = 0.004
 Identities = 27/73 (36%), Positives = 34/73 (45%), Gaps = 14/73 (19%)
 Frame = -1

Query: 375 LPRPCWQGRPA---CPRPGGPLP---PPTRPQPWRRPPPLMI--------ASLCPLGAST 238
           +P P +Q  PA    P P  P P   PPT+PQP  RPPP ++         +  P+GA T
Sbjct: 722 IPTPAYQSSPAGGHAPTPPTPAPRTMPPTKPQPPARPPPPVLPANRAPSATAPSPVGAGT 781

Query: 237 CAAPRMQVCYEAP 199
            A    Q    AP
Sbjct: 782 AAPAPSQTPGSAP 794

>dbj|BAA92613.1| KIAA1375 protein [Homo sapiens]
          Length = 546

 Score = 42.0 bits (97), Expect = 0.004
 Identities = 27/73 (36%), Positives = 34/73 (45%), Gaps = 14/73 (19%)
 Frame = -1

Query: 375 LPRPCWQGRPA---CPRPGGPLP---PPTRPQPWRRPPPLMI--------ASLCPLGAST 238
           +P P +Q  PA    P P  P P   PPT+PQP  RPPP ++         +  P+GA T
Sbjct: 400 IPTPAYQSSPAGGHAPTPPTPAPRTMPPTKPQPPARPPPPVLPANRAPSATAPSPVGAGT 459

Query: 237 CAAPRMQVCYEAP 199
            A    Q    AP
Sbjct: 460 AAPAPSQTPGSAP 472

>dbj|BAA92092.1| unnamed protein product [Homo sapiens]
          Length = 617

 Score = 42.0 bits (97), Expect = 0.004
 Identities = 27/73 (36%), Positives = 34/73 (45%), Gaps = 14/73 (19%)
 Frame = -1

Query: 375 LPRPCWQGRPA---CPRPGGPLP---PPTRPQPWRRPPPLMI--------ASLCPLGAST 238
           +P P +Q  PA    P P  P P   PPT+PQP  RPPP ++         +  P+GA T
Sbjct: 471 IPTPAYQSSPAGGHAPTPPTPAPRTMPPTKPQPPARPPPPVLPANRAPSATAPSPVGAGT 530

Query: 237 CAAPRMQVCYEAP 199
            A    Q    AP
Sbjct: 531 AAPAPSQTPGSAP 543

>gb|AAF08220.1|AF151793_1 ALG-2 interacting protein 1 [Homo sapiens]
          Length = 868

 Score = 41.6 bits (96), Expect = 0.005
 Identities = 27/73 (36%), Positives = 34/73 (45%), Gaps = 14/73 (19%)
 Frame = -1

Query: 375 LPRPCWQGRPA---CPRPGGPLP---PPTRPQPWRRPPPLMI--------ASLCPLGAST 238
           +P P +Q  PA    P P  P P   PPT+PQP  RPPP ++         +  P+GA T
Sbjct: 722 IPTPAYQSLPAGGHAPTPPTPAPRTMPPTKPQPPARPPPPVLPANRAPSATAPSPVGAGT 781

Query: 237 CAAPRMQVCYEAP 199
            A    Q    AP
Sbjct: 782 AAPAPSQTPGSAP 794



EST assemble image


clone accession position
1 LC028a03_r AV620875 1 492
2 HC051h12_r AV635863 7 451
3 LCL098b09_r AV631684 7 402




Chlamydomonas reinhardtii
Kazusa DNA Research Institute