KCC002026A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002026A_C01 KCC002026A_c01
CTCACCGACACCGCTGATACTTACAGTGACACTATACAAGAGACGAGGCACCTGCTGTGC
AGTCCAGGAGTCCCGCCAAGATGTTCCTGACACGAAGCGAGTATGACCGTGGTGTTAACA
CTTTCAGTCCAGAGGGACGTTTGTTTCAAGTAGAGTACGCATTGGAGGCTATCAAGCTTG
GCTCGACGGCTATCGGCATTTGCACCAAGGAGGGCGTGGTGCTTGCGGTGGAGAAGCGCA
TTACATCGCCTCTTCTGGAGCCCAGCAGCATTGAGAAGATTATGGAGATCGATGAGCACA
TGGCGTGCGCTATGAGCGGCCTGACCGCTGACGCGAAGACGTTGATAGACCACGCGCGTG
CGGATACGCAGCAACACCGCTTCTCATACAACGAGCCCATGCCGATTGAGTCGACCACCC
AGTCTCTGTGCGACCTGGCGCTACGATTCGGCGAGGACTCGGACGAGGGCGGCGGCATGA
GCCGCGCCCTTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002026A_C01 KCC002026A_c01
         (492 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|Q9M4T8|PSA5_SOYBN Proteasome subunit alpha type 5 (20S protea...   223  8e-58
ref|NP_188046.1| 20S proteasome alpha subunit E2 (PAE2) [Arabido...   223  1e-57
ref|NP_175788.1| 20S proteasome alpha subunit E1 (PAE1) [Arabido...   223  1e-57
sp|Q9LSU1|PSA5_ORYSA Proteasome subunit alpha type 5 (20S protea...   221  4e-57
emb|CAD10778.1| 20S proteasome subunit alpha V [Physcomitrella p...   220  8e-57

>sp|Q9M4T8|PSA5_SOYBN Proteasome subunit alpha type 5 (20S proteasome alpha subunit E)
           (20S proteasome subunit alpha-5)
           gi|7839485|gb|AAF70292.1|AF255338_1 20S proteasome
           subunit [Glycine max]
          Length = 237

 Score =  223 bits (569), Expect = 8e-58
 Identities = 111/135 (82%), Positives = 123/135 (90%)
 Frame = +3

Query: 81  MFLTRSEYDRGVNTFSPEGRLFQVEYALEAIKLGSTAIGICTKEGVVLAVEKRITSPLLE 260
           MFLTR+EYDRGVNTFSPEGRLFQVEYA+EAIKLGSTAIG+ TKEGVVLAVEKRITSPLLE
Sbjct: 1   MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLE 60

Query: 261 PSSIEKIMEIDEHMACAMSGLTADAKTLIDHARADTQQHRFSYNEPMPIESTTQSLCDLA 440
           PSS+EKIMEIDEH+ CAMSGL ADA+TL++HAR +TQ HRFSY EPM +ESTTQ+LCDLA
Sbjct: 61  PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120

Query: 441 LRFGEDSDEGGGMSR 485
           LRFGE  +E   MSR
Sbjct: 121 LRFGEGDEE--SMSR 133

>ref|NP_188046.1| 20S proteasome alpha subunit E2 (PAE2) [Arabidopsis thaliana]
           gi|18206373|sp|Q42134|PS52_ARATH Proteasome subunit
           alpha type 5-2 (20S proteasome alpha subunit E2)
           gi|25290065|pir||T51973 C 3.4.25.1 proteasome
           endopeptidase complex () chain PAE2 [imported] -
           Arabidopsis thaliana gi|3421090|gb|AAC32061.1| 20S
           proteasome subunit PAE2 [Arabidopsis thaliana]
           gi|9279577|dbj|BAB01035.1| 20S proteasome subunit
           PAE-like protein [Arabidopsis thaliana]
           gi|13877965|gb|AAK44060.1|AF370245_1 putative 20S
           proteasome subunit PAE2 [Arabidopsis thaliana]
           gi|17065644|gb|AAL33816.1| putative 20S proteasome
           subunit PAE2 [Arabidopsis thaliana]
          Length = 237

 Score =  223 bits (567), Expect = 1e-57
 Identities = 110/135 (81%), Positives = 123/135 (90%)
 Frame = +3

Query: 81  MFLTRSEYDRGVNTFSPEGRLFQVEYALEAIKLGSTAIGICTKEGVVLAVEKRITSPLLE 260
           MFLTR+EYDRGVNTFSPEGRLFQVEYA+EAIKLGSTAIG+ TKEGVVLAVEKRITSPLLE
Sbjct: 1   MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLE 60

Query: 261 PSSIEKIMEIDEHMACAMSGLTADAKTLIDHARADTQQHRFSYNEPMPIESTTQSLCDLA 440
           PSS+EKIMEID+H+ CAMSGL ADA+TL++HAR +TQ HRFSY EPM +ESTTQ+LCDLA
Sbjct: 61  PSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120

Query: 441 LRFGEDSDEGGGMSR 485
           LRFGE  +E   MSR
Sbjct: 121 LRFGEGEEE--SMSR 133

>ref|NP_175788.1| 20S proteasome alpha subunit E1 (PAE1) [Arabidopsis thaliana]
           gi|12229903|sp|O81149|PS51_ARATH Proteasome subunit
           alpha type 5-1 (20S proteasome alpha subunit E1)
           gi|25290064|pir||T51972 C 3.4.25.1 proteasome
           endopeptidase complex () PAE1 [imported] - Arabidopsis
           thaliana gi|3421087|gb|AAC32060.1| 20S proteasome
           subunit PAE1 [Arabidopsis thaliana]
           gi|6056394|gb|AAF02858.1|AC009324_7 20S proteasome
           subunit PAE1 [Arabidopsis thaliana]
           gi|18252873|gb|AAL62363.1| 20S proteasome subunit PAE1
           [Arabidopsis thaliana] gi|21387063|gb|AAM47935.1| 20S
           proteasome subunit PAE1 [Arabidopsis thaliana]
           gi|21554176|gb|AAM63255.1| Proteasome subunit alpha type
           5-1 (20S proteasome alpha subunit E1) [Arabidopsis
           thaliana]
          Length = 237

 Score =  223 bits (567), Expect = 1e-57
 Identities = 110/135 (81%), Positives = 123/135 (90%)
 Frame = +3

Query: 81  MFLTRSEYDRGVNTFSPEGRLFQVEYALEAIKLGSTAIGICTKEGVVLAVEKRITSPLLE 260
           MFLTR+EYDRGVNTFSPEGRLFQVEYA+EAIKLGSTAIG+ TKEGVVLAVEKRITSPLLE
Sbjct: 1   MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLE 60

Query: 261 PSSIEKIMEIDEHMACAMSGLTADAKTLIDHARADTQQHRFSYNEPMPIESTTQSLCDLA 440
           PSS+EKIMEID+H+ CAMSGL ADA+TL++HAR +TQ HRFSY EPM +ESTTQ+LCDLA
Sbjct: 61  PSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120

Query: 441 LRFGEDSDEGGGMSR 485
           LRFGE  +E   MSR
Sbjct: 121 LRFGEGEEE--SMSR 133

>sp|Q9LSU1|PSA5_ORYSA Proteasome subunit alpha type 5 (20S proteasome alpha subunit E)
           (20S proteasome subunit alpha-5)
           gi|8671498|dbj|BAA96832.1| alpha 5 subunit of 20S
           proteasome [Oryza sativa (japonica cultivar-group)]
          Length = 237

 Score =  221 bits (563), Expect = 4e-57
 Identities = 108/135 (80%), Positives = 123/135 (91%)
 Frame = +3

Query: 81  MFLTRSEYDRGVNTFSPEGRLFQVEYALEAIKLGSTAIGICTKEGVVLAVEKRITSPLLE 260
           MFLTR+EYDRGVNTFSPEGRLFQVEYA+EAIKLGSTAIG+ TK+GVVLAVEKR+TSPLLE
Sbjct: 1   MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLE 60

Query: 261 PSSIEKIMEIDEHMACAMSGLTADAKTLIDHARADTQQHRFSYNEPMPIESTTQSLCDLA 440
           PSS+EKIMEIDEH+ CAMSGL ADA+TL++HAR +TQ HRFSY EPM +ESTTQ++CDLA
Sbjct: 61  PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLA 120

Query: 441 LRFGEDSDEGGGMSR 485
           LRFGE  +E   MSR
Sbjct: 121 LRFGEGDEE--SMSR 133

>emb|CAD10778.1| 20S proteasome subunit alpha V [Physcomitrella patens]
          Length = 237

 Score =  220 bits (560), Expect = 8e-57
 Identities = 109/135 (80%), Positives = 122/135 (89%)
 Frame = +3

Query: 81  MFLTRSEYDRGVNTFSPEGRLFQVEYALEAIKLGSTAIGICTKEGVVLAVEKRITSPLLE 260
           MFLTRSEYDRG NTFSPEGRLFQVEYA+EAIKLGSTA+G+ TKEGVVLAVEKRITS LLE
Sbjct: 1   MFLTRSEYDRGFNTFSPEGRLFQVEYAIEAIKLGSTAVGLKTKEGVVLAVEKRITSVLLE 60

Query: 261 PSSIEKIMEIDEHMACAMSGLTADAKTLIDHARADTQQHRFSYNEPMPIESTTQSLCDLA 440
           P+S+EKIMEIDEH+ CAMSGLTADA+TL++H R +TQ HRFSYNEPM +ESTTQ+LCDLA
Sbjct: 61  PTSVEKIMEIDEHIGCAMSGLTADARTLVEHGRVETQNHRFSYNEPMSVESTTQALCDLA 120

Query: 441 LRFGEDSDEGGGMSR 485
           LRFGE  +E   MSR
Sbjct: 121 LRFGEFDEE--SMSR 133



EST assemble image


clone accession position
1 HC050d09_r AV635749 1 492
2 LCL050a02_r AV628985 1 231




Chlamydomonas reinhardtii
Kazusa DNA Research Institute