Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002016A_C01 KCC002016A_c01
(605 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP12948.1| putative pre-mRNA splicing factor [Oryza sativa (... 38 0.13
gb|AAL55824.1|AF318317_1 unknown [Homo sapiens] 37 0.22
emb|CAB93479.1| hypothetical protein L2267.03 [Leishmania major] 37 0.28
prf||1209265AB chorion protein B5 36 0.49
ref|NP_608677.1| CG9866-PA [Drosophila melanogaster] gi|24581122... 35 0.63
>gb|AAP12948.1| putative pre-mRNA splicing factor [Oryza sativa (japonica
cultivar-group)]
Length = 572
Score = 37.7 bits (86), Expect = 0.13
Identities = 27/80 (33%), Positives = 38/80 (46%), Gaps = 9/80 (11%)
Frame = +1
Query: 355 SALMQAAGKADTAAPITATATTAAQASTRQPHTPTLHY----PTDEHMWCMVCATRHTPA 522
S L A A A TA A +AA AST +P P+LH PT + +W V +H A
Sbjct: 27 SPLRLPAKSAAPAVDDTALALSAAAASTSRPLDPSLHLVPFNPTADQLWAPVLGPQHPHA 86
Query: 523 RLASM-----HAMPHLKTHA 567
++S H + H++ A
Sbjct: 87 PISSASGNRNHKLGHVEDAA 106
>gb|AAL55824.1|AF318317_1 unknown [Homo sapiens]
Length = 400
Score = 37.0 bits (84), Expect = 0.22
Identities = 27/86 (31%), Positives = 38/86 (43%), Gaps = 5/86 (5%)
Frame = -3
Query: 594 SVVVCAT-WRCMGFEVRHCMHACEPRRRMSCCAHHAPHVLVCRIV-QCWRVGLSRR---C 430
S+ VCA+ C+ V C+H C M CAH HV +C V C R+ + C
Sbjct: 129 SMYVCASVCACVCVCVCVCVHVC-----MRVCAHQCLHVCICVYVCVCARICVCACVYVC 183
Query: 429 LCRGGCRGRYGCGGVSLPCCLHKSGC 352
+C C Y C + + C+H C
Sbjct: 184 VCISVCACVYVCVHLCVCACVHACVC 209
>emb|CAB93479.1| hypothetical protein L2267.03 [Leishmania major]
Length = 738
Score = 36.6 bits (83), Expect = 0.28
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 14/81 (17%)
Frame = +3
Query: 282 SPSQTLRSKSICRTALSPAAAARYIRSY-----------AGSREG*HRRTHNGHGNHRGT 428
SPS +L S S P + +SY S G HR ++ G G+H G+
Sbjct: 354 SPSSSLTSPSHQLPPPPPLQGEHHGQSYWSEEQDIPYRRGSSAAGEHRSSNTGTGSHIGS 413
Query: 429 GIDETAPHAN---TALSDRRA 482
G+ E PHA+ A S RRA
Sbjct: 414 GLSEEGPHADIAPAAASGRRA 434
>prf||1209265AB chorion protein B5
Length = 169
Score = 35.8 bits (81), Expect = 0.49
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -3
Query: 450 VGLSRRCLCRG-GCRGRYGCGGVSLPCCLHKSGCSAPQRPD*VPSC 316
+G C CRG GCRG GCGG CC CS P + C
Sbjct: 20 LGTGCGCGCRGCGCRGCGGCGGCGCGCCDRFCVCSNSAAPTGLSIC 65
>ref|NP_608677.1| CG9866-PA [Drosophila melanogaster] gi|24581122|ref|NP_722803.1|
CG9866-PB [Drosophila melanogaster]
gi|7295962|gb|AAF51260.1| CG9866-PA [Drosophila
melanogaster] gi|21428552|gb|AAM49936.1| LD40170p
[Drosophila melanogaster] gi|22945408|gb|AAN10428.1|
CG9866-PB [Drosophila melanogaster]
Length = 971
Score = 35.4 bits (80), Expect = 0.63
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
Frame = +1
Query: 235 RSKSEQ*RRHGLKKSAVLVRRCAQNQFAGRHSVRPLRRATSALMQAAGKADTAAPITATA 414
RSKS + R H A+L +++ + + S +A+++ + AAP T
Sbjct: 249 RSKSSKNRHHSSPAPALLESNHKESKGSKKSSAIAAPPVVAAVVKEEPPSVGAAPAAITM 308
Query: 415 -TTAAQASTRQPHTPTLHYPTDEHMWCMVCATRHTPARL-ASMHAMPHLKTHAPPRGTDH 588
++++ +S P TPTL + E + ++PA+L +P L+ +G+
Sbjct: 309 FSSSSNSSCSLPPTPTLGAASSE----VAMGVNYSPAQLQTDAEKLPELQPKKKLKGSSD 364
Query: 589 HRLRS 603
HR+++
Sbjct: 365 HRIKA 369
