KCC002014A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002014A_C01 KCC002014A_c01
cagcagcctgctgagcagcgcgctcaagacgctgggcgccaacaaggagaacgcgctgcc
catcaagctgttcgaggtcaGCGACGCCATCCTGCTGGACAGCGCCGTGGCGGTTGGCGC
GCGCAACGAGCGGCGGCTGGTGGCGGTGTACTGCGCCAAGGAGAGCGGCTTCGAGGTGGT
GCACGGCCTGTTGAACAGGGTCATGGAGGTGCTGGGCGTGCCGTACAGGGACGAGCCCGG
CGCCTCCTCCGCGCCCGTGTCCTACCACTGGGCGCCCGCCGCCGACCCCGCGCTGTTCCC
CGGGCGCCAGGCCGCGGTGTTCGCCTCCACCTGCGGCGACAAGCCCGTGGGCGTGTTCGG
CATCGTGCACCCAGAGGTGCTGACGGCCTTTGAGCTGCCGTACCCGGTGTCGGCCCTTGA
GTTGAACATCGAGCCCTTCGTGTTCGACCAGTTCTACCAGTCCAAATTGGAGCCCCTCAG
CAACTGAGAAGCCGGGGCACTGGCGGCCTAGCTAGCTGGCCGGTGGTTGCTGCTGCTGAG
AACAGTGGCGCTGGCGGCGATCGGACATTGATGGGTGCTCGGTCGGTGGGCTGCTGGATT
GGTGTCCTGAGGAGGCGCTTGAGGGCTTGTGACGGGGCT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002014A_C01 KCC002014A_c01
         (639 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_651237.1| CG5706-PA [Drosophila melanogaster] gi|12230002...   136  3e-31
sp|Q9WUA2|SYFB_MOUSE Phenylalanyl-tRNA synthetase beta chain (Ph...   134  9e-31
ref|NP_035941.2| phenylalanine-tRNA synthetase-like; phenylalani...   133  2e-30
dbj|BAB28064.1| unnamed protein product [Mus musculus]                133  2e-30
ref|XP_313256.1| ENSANGP00000010460 [Anopheles gambiae] gi|21296...   132  6e-30

>ref|NP_651237.1| CG5706-PA [Drosophila melanogaster]
           gi|12230002|sp|Q9VCA5|SYFB_DROME Probable
           phenylalanyl-tRNA synthetase beta chain
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
           gi|7301135|gb|AAF56268.1| CG5706-PA [Drosophila
           melanogaster] gi|15292483|gb|AAK93510.1| SD03863p
           [Drosophila melanogaster]
          Length = 589

 Score =  136 bits (342), Expect = 3e-31
 Identities = 73/147 (49%), Positives = 95/147 (63%)
 Frame = +2

Query: 2   SSLLSSALKTLGANKENALPIKLFEVSDAILLDSAVAVGARNERRLVAVYCAKESGFEVV 181
           ++LL   LKTL AN++  LP+KLFE+SD ++ D +  VGARNERR+ AV C K +GFEVV
Sbjct: 450 TTLLPGLLKTLVANRKMPLPLKLFEISDVVVADESTEVGARNERRVCAVNCNKTAGFEVV 509

Query: 182 HGLLNRVMEVLGVPYRDEPGASSAPVSYHWAPAADPALFPGRQAAVFASTCGDKPVGVFG 361
           HGLL+RVM++L VP++   G       Y+     DP+ FPGR A V         +G  G
Sbjct: 510 HGLLDRVMQLLSVPWKSASGTK----GYYLQATEDPSYFPGRCANVMYD---GVVIGKIG 562

Query: 362 IVHPEVLTAFELPYPVSALELNIEPFV 442
           ++HP VL AFEL  P SA+E  IEPFV
Sbjct: 563 VLHPTVLQAFELTTPCSAVEFTIEPFV 589

>sp|Q9WUA2|SYFB_MOUSE Phenylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase
           beta chain) (PheRS) gi|4633656|gb|AAD26855.1|AF123263_1
           phenylalanyl tRNA synthetase beta subunit [Mus musculus]
           gi|16741161|gb|AAH16428.1| Phenylalanine-tRNA
           synthetase-like [Mus musculus]
          Length = 589

 Score =  134 bits (338), Expect = 9e-31
 Identities = 69/147 (46%), Positives = 98/147 (65%)
 Frame = +2

Query: 2   SSLLSSALKTLGANKENALPIKLFEVSDAILLDSAVAVGARNERRLVAVYCAKESGFEVV 181
           ++LL   LKT+ AN++  LP+KLFE+SD ++ DS   VGA+N R L AVY +K  GFE++
Sbjct: 452 TTLLPGLLKTIAANRKMPLPLKLFEISDVVVKDSGKDVGAKNYRHLCAVYYSKTPGFEII 511

Query: 182 HGLLNRVMEVLGVPYRDEPGASSAPVSYHWAPAADPALFPGRQAAVFASTCGDKPVGVFG 361
           HGLL+R+M++L VP  +E G       Y    +A  A FPGR A +F    G + +G  G
Sbjct: 512 HGLLDRIMQLLDVPPGEESG------GYMIKASAGSAFFPGRCAEIFV---GGQSIGKLG 562

Query: 362 IVHPEVLTAFELPYPVSALELNIEPFV 442
           ++HP+V+T FEL  P S+LE+NIEPF+
Sbjct: 563 VLHPDVITKFELTMPCSSLEINIEPFL 589

>ref|NP_035941.2| phenylalanine-tRNA synthetase-like; phenylalanine tRNA synthetase
           alpha; PheRS alpha [Mus musculus]
           gi|12845588|dbj|BAB26810.1| unnamed protein product [Mus
           musculus] gi|26337355|dbj|BAC32363.1| unnamed protein
           product [Mus musculus]
          Length = 589

 Score =  133 bits (335), Expect = 2e-30
 Identities = 69/147 (46%), Positives = 97/147 (65%)
 Frame = +2

Query: 2   SSLLSSALKTLGANKENALPIKLFEVSDAILLDSAVAVGARNERRLVAVYCAKESGFEVV 181
           ++LL   LKT+ AN++  LP+KLFE+SD ++ DS   VGA+N R L AVY  K  GFE++
Sbjct: 452 TTLLPGLLKTIAANRKMPLPLKLFEISDVVVKDSGKDVGAKNYRHLCAVYYNKTPGFEII 511

Query: 182 HGLLNRVMEVLGVPYRDEPGASSAPVSYHWAPAADPALFPGRQAAVFASTCGDKPVGVFG 361
           HGLL+R+M++L VP  +E G       Y    +A  A FPGR A +F    G + +G  G
Sbjct: 512 HGLLDRIMQLLDVPPGEESG------GYMIKASAGSAFFPGRCAEIFV---GGQSIGKLG 562

Query: 362 IVHPEVLTAFELPYPVSALELNIEPFV 442
           ++HP+V+T FEL  P S+LE+NIEPF+
Sbjct: 563 VLHPDVITKFELTMPCSSLEINIEPFL 589

>dbj|BAB28064.1| unnamed protein product [Mus musculus]
          Length = 589

 Score =  133 bits (335), Expect = 2e-30
 Identities = 69/147 (46%), Positives = 97/147 (65%)
 Frame = +2

Query: 2   SSLLSSALKTLGANKENALPIKLFEVSDAILLDSAVAVGARNERRLVAVYCAKESGFEVV 181
           ++LL   LKT+ AN++  LP+KLFE+SD ++ DS   VGA+N R L AVY  K  GFE++
Sbjct: 452 TTLLPGLLKTIAANRKMPLPLKLFEISDVVVKDSGKDVGAKNYRHLCAVYYNKTPGFEII 511

Query: 182 HGLLNRVMEVLGVPYRDEPGASSAPVSYHWAPAADPALFPGRQAAVFASTCGDKPVGVFG 361
           HGLL+R+M++L VP  +E G       Y    +A  A FPGR A +F    G + +G  G
Sbjct: 512 HGLLDRIMQLLDVPPGEESG------GYMIKASAGSAFFPGRCAEIFV---GGQSIGKLG 562

Query: 362 IVHPEVLTAFELPYPVSALELNIEPFV 442
           ++HP+V+T FEL  P S+LE+NIEPF+
Sbjct: 563 VLHPDVITKFELTMPCSSLEINIEPFL 589

>ref|XP_313256.1| ENSANGP00000010460 [Anopheles gambiae] gi|21296792|gb|EAA08937.1|
           ENSANGP00000010460 [Anopheles gambiae str. PEST]
          Length = 619

 Score =  132 bits (331), Expect = 6e-30
 Identities = 72/147 (48%), Positives = 95/147 (63%)
 Frame = +2

Query: 2   SSLLSSALKTLGANKENALPIKLFEVSDAILLDSAVAVGARNERRLVAVYCAKESGFEVV 181
           ++L+   LKTL AN++  LP+KLFEVSD +L DS   VGA+NERR+ A+ C K +GFEVV
Sbjct: 483 TTLIPGLLKTLAANRKMPLPLKLFEVSDVVLADSKSEVGAKNERRVCAINCNKTAGFEVV 542

Query: 182 HGLLNRVMEVLGVPYRDEPGASSAPVSYHWAPAADPALFPGRQAAVFASTCGDKPVGVFG 361
           HGLL+RVM++L VP+  + G       Y+     DPA FPGR A+V         +G  G
Sbjct: 543 HGLLDRVMQLLEVPWDRQTG-------YYLQACDDPAYFPGRCASVLYKGAA---IGRIG 592

Query: 362 IVHPEVLTAFELPYPVSALELNIEPFV 442
           ++HP VL AFEL  P S +E N+E FV
Sbjct: 593 VLHPTVLQAFELTTPCSVVEFNMEYFV 619



EST assemble image


clone accession position
1 MX201g11_r BP089159 1 352
2 HC048d07_r AV635603 92 639




Chlamydomonas reinhardtii
Kazusa DNA Research Institute