Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002008A_C01 KCC002008A_c01
(1019 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_823399.1| putative protoporphyrinogen oxidase [Streptomyc... 49 1e-04
gb|AAP82644.1| Hypothetical protein R144.4a [Caenorhabditis eleg... 48 3e-04
ref|NP_741123.1| actin-binding WH2 (3G109) [Caenorhabditis elegans] 48 3e-04
ref|NP_741122.1| actin-binding WH2 (3G109) [Caenorhabditis elegans] 48 3e-04
gb|AAP82645.1| Hypothetical protein R144.4b [Caenorhabditis eleg... 48 3e-04
>ref|NP_823399.1| putative protoporphyrinogen oxidase [Streptomyces avermitilis
MA-4680] gi|29605870|dbj|BAC69934.1| putative
protoporphyrinogen oxidase [Streptomyces avermitilis
MA-4680]
Length = 474
Score = 49.3 bits (116), Expect = 1e-04
Identities = 62/212 (29%), Positives = 79/212 (37%), Gaps = 27/212 (12%)
Frame = +2
Query: 464 CSTWIWTRTRTPRPPYAT-VPRPPPTRPH-PAPSRAPCACHSRPGRSS*RTLRIWRGVSN 637
C+ W+ PRPP + PR PP RP PA S P WR
Sbjct: 275 CTPTPWSSPCPPRPPPSCCAPRHPPPRPSWPASSTRP-----------------WR---- 313
Query: 638 NWSLPSLASLPLLPPCNNNSSSLSSSGPWSSWRR----------TCGPPAWRSR*YRRRA 787
WS A++ P SS L S+G S RR T P W RR
Sbjct: 314 -WSPSPTAAVGPASPKAAASSCLPSTGAPSRHRRSPPRSGAGSRTRTPTCWCCA--RRSG 370
Query: 788 PTSARRSPPAPSATPSWWSA*A---------PPSHLPVTPHAITSSSLMLPCMTT*AWP- 937
T+ RRS + TP+ W++ A PP P A ++ P TT AWP
Sbjct: 371 GTARRRS--SAGTTPASWTSRATTCARRPAWPPRRSPAASPAGPTACRSTPSATTRAWPA 428
Query: 938 -----PSRPPTGAPWRRRCLAARRRHGLAVSP 1018
PS P + + RR +A R A +P
Sbjct: 429 SATTSPSCPASPSAARRTTASASRPASPARTP 460
Score = 33.9 bits (76), Expect = 4.6
Identities = 42/152 (27%), Positives = 55/152 (35%), Gaps = 4/152 (2%)
Frame = +2
Query: 299 STLAKLWHKMCRHKGARLSQRRCATSTTSSLLATGSIWKRSSIRTL*AARKRPKRCSTWI 478
ST A H+ + S+ R T + + G+ +RSS T A+
Sbjct: 337 STGAPSRHRRSPPRSGAGSRTRTPTCWCCARRSGGTARRRSSAGTTPAS----------- 385
Query: 479 WTRTRTPRPPYATVPRPPPTRPHPAPSRAPCACHSRPGRSS*RTLRIWRGVSNNWSLPSL 658
WT T A P PP R A P AC S P T R W + + PS
Sbjct: 386 WTSRATT---CARRPAWPPRRSPAASPAGPTACRSTPS----ATTRAWPASAT--TSPSC 436
Query: 659 ASLPLLPPCNNNSSSLSSS----GPWSSWRRT 742
+ P S+S +S PWSSW T
Sbjct: 437 PASPSAARRTTASASRPASPARTPPWSSWAAT 468
>gb|AAP82644.1| Hypothetical protein R144.4a [Caenorhabditis elegans]
Length = 360
Score = 47.8 bits (112), Expect = 3e-04
Identities = 48/165 (29%), Positives = 71/165 (42%), Gaps = 15/165 (9%)
Frame = +2
Query: 503 PPYATVPRPPPTRPHPAPSRAPCACHSRPG--RSS*RTLRIWRGVSNNWSLPSLASLPLL 676
PP P PPP P PA S P + ++R + L++ + V+N+ S PS+ +
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPPSSNARNALLGDIHKGLKLKKTVTNDRSAPSVGKVVGS 61
Query: 677 PPCNNNSSSLSSSGPWSSWRRTC---------GPPAWRSR*YRRRAPTSARRSPPAPSAT 829
++N +S + +GP + + G P S RRA TS P A SA
Sbjct: 62 SGSSSNGNSGNGNGPAAKPPQMSGGLGGLFANGMPMKPSENKIRRATTSIGPPPTASSAP 121
Query: 830 PSWWSA*APPSHLPVT----PHAITSSSLMLPCMTT*AWPPSRPP 952
P PP+ +P P ++SSS T+ A PP PP
Sbjct: 122 PV-----PPPAPVPAVEGKKPSIVSSSSFSHHGATSSAPPPPPPP 161
>ref|NP_741123.1| actin-binding WH2 (3G109) [Caenorhabditis elegans]
Length = 376
Score = 47.8 bits (112), Expect = 3e-04
Identities = 48/165 (29%), Positives = 71/165 (42%), Gaps = 15/165 (9%)
Frame = +2
Query: 503 PPYATVPRPPPTRPHPAPSRAPCACHSRPG--RSS*RTLRIWRGVSNNWSLPSLASLPLL 676
PP P PPP P PA S P + ++R + L++ + V+N+ S PS+ +
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPPSSNARNALLGDIHKGLKLKKTVTNDRSAPSVGKVVGS 61
Query: 677 PPCNNNSSSLSSSGPWSSWRRTC---------GPPAWRSR*YRRRAPTSARRSPPAPSAT 829
++N +S + +GP + + G P S RRA TS P A SA
Sbjct: 62 SGSSSNGNSGNGNGPAAKPPQMSGGLGGLFANGMPMKPSENKIRRATTSIGPPPTASSAP 121
Query: 830 PSWWSA*APPSHLPVT----PHAITSSSLMLPCMTT*AWPPSRPP 952
P PP+ +P P ++SSS T+ A PP PP
Sbjct: 122 PV-----PPPAPVPAVEGKKPSIVSSSSFSHHGATSSAPPPPPPP 161
>ref|NP_741122.1| actin-binding WH2 (3G109) [Caenorhabditis elegans]
Length = 378
Score = 47.8 bits (112), Expect = 3e-04
Identities = 48/165 (29%), Positives = 71/165 (42%), Gaps = 15/165 (9%)
Frame = +2
Query: 503 PPYATVPRPPPTRPHPAPSRAPCACHSRPG--RSS*RTLRIWRGVSNNWSLPSLASLPLL 676
PP P PPP P PA S P + ++R + L++ + V+N+ S PS+ +
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPPSSNARNALLGDIHKGLKLKKTVTNDRSAPSVGKVVGS 61
Query: 677 PPCNNNSSSLSSSGPWSSWRRTC---------GPPAWRSR*YRRRAPTSARRSPPAPSAT 829
++N +S + +GP + + G P S RRA TS P A SA
Sbjct: 62 SGSSSNGNSGNGNGPAAKPPQMSGGLGGLFANGMPMKPSENKIRRATTSIGPPPTASSAP 121
Query: 830 PSWWSA*APPSHLPVT----PHAITSSSLMLPCMTT*AWPPSRPP 952
P PP+ +P P ++SSS T+ A PP PP
Sbjct: 122 PV-----PPPAPVPAVEGKKPSIVSSSSFSHHGATSSAPPPPPPP 161
>gb|AAP82645.1| Hypothetical protein R144.4b [Caenorhabditis elegans]
Length = 362
Score = 47.8 bits (112), Expect = 3e-04
Identities = 48/165 (29%), Positives = 71/165 (42%), Gaps = 15/165 (9%)
Frame = +2
Query: 503 PPYATVPRPPPTRPHPAPSRAPCACHSRPG--RSS*RTLRIWRGVSNNWSLPSLASLPLL 676
PP P PPP P PA S P + ++R + L++ + V+N+ S PS+ +
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPPSSNARNALLGDIHKGLKLKKTVTNDRSAPSVGKVVGS 61
Query: 677 PPCNNNSSSLSSSGPWSSWRRTC---------GPPAWRSR*YRRRAPTSARRSPPAPSAT 829
++N +S + +GP + + G P S RRA TS P A SA
Sbjct: 62 SGSSSNGNSGNGNGPAAKPPQMSGGLGGLFANGMPMKPSENKIRRATTSIGPPPTASSAP 121
Query: 830 PSWWSA*APPSHLPVT----PHAITSSSLMLPCMTT*AWPPSRPP 952
P PP+ +P P ++SSS T+ A PP PP
Sbjct: 122 PV-----PPPAPVPAVEGKKPSIVSSSSFSHHGATSSAPPPPPPP 161
