Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002003A_C01 KCC002003A_c01
(581 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_005623.1| small optic lobes homolog; Small optic lobes, d... 39 0.069
ref|NP_458795.1| DNA mismatch repair protein [Salmonella enteric... 33 2.2
sp|Q00662|BGAL_DIACA Putative beta-galactosidase precursor (Lact... 33 2.9
ref|NP_044485.1| proposed start codon is CTG [Human herpesvirus ... 33 3.8
ref|NP_769806.1| gcl [Bradyrhizobium japonicum] gi|27351424|dbj|... 32 4.9
>ref|NP_005623.1| small optic lobes homolog; Small optic lobes, drosophila, homolog
of [Homo sapiens] gi|3462351|gb|AAC33822.1| small optic
lobes homolog [Homo sapiens] gi|10944269|emb|CAC14067.1|
c366D1.1 (small optic lobes (Drosophila) homolog) [Homo
sapiens] gi|14336701|gb|AAK61233.1|AE006464_1 small
optic lobes homolog [Homo sapiens]
Length = 1086
Score = 38.5 bits (88), Expect = 0.069
Identities = 38/142 (26%), Positives = 55/142 (37%), Gaps = 2/142 (1%)
Frame = -2
Query: 445 PHHATPRCNPQPVGANTWPSQPGPDIRLPFLYQARQPTPAMRCNHVPRTR*HSMTKYLGK 266
P +T + NP P P Q P + +A QP+P+ C P+ + L +
Sbjct: 234 PFSSTLQNNPVPRSRREVPPQLQPPVP-----EAAQPSPSAGCRGAPQGSGWAGASRLAE 288
Query: 265 TTTNLILAHIKESQSAGLQDRCLGRSRHSACQAIVAL*GLSGRQNPAIGSRS--TLWVIL 92
+ L+ ++E + G R S S I+ L G + R PA S T W
Sbjct: 289 LLSGKRLSVLEEEATEGGTSRVEAGSSTSGSD-IIDLAGDTVRYTPASPSSPDFTTWSC- 346
Query: 91 MRAVCLSHNPCTLPTCCGWGCT 26
A C NP P C GC+
Sbjct: 347 --AKCTLRNPTVAPRCSACGCS 366
>ref|NP_458795.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Typhi] gi|29144657|ref|NP_807999.1| DNA mismatch
repair protein [Salmonella enterica subsp. enterica
serovar Typhi Ty2] gi|20455099|sp|Q8Z187|MUTL_SALTI DNA
mismatch repair protein mutL gi|25327610|pir||AG1048 DNA
mismatch repair protein [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16505486|emb|CAD06836.1| DNA mismatch repair protein
[Salmonella enterica subsp. enterica serovar Typhi]
gi|29140296|gb|AAO71859.1| DNA mismatch repair protein
[Salmonella enterica subsp. enterica serovar Typhi Ty2]
Length = 618
Score = 33.5 bits (75), Expect = 2.2
Identities = 39/153 (25%), Positives = 52/153 (33%)
Frame = -1
Query: 524 VYPSTASRLTRPTNTPTCTFTLRTTLASPRHAALQSPACGGKHMAVPARAGHPLAISLSG 345
+Y S L + T T T L +PRH A G H AVPA P A
Sbjct: 322 IYQGVLSVLQQQTET---TLPLEEIAPAPRHVPENRIAAGRNHFAVPA---EPTAAREPA 375
Query: 344 PPAYSRNALQPRTTHTLAQHDKIFRKNHDQLDTCTYQRVSVCWSARPLPWPVTAQRLPGH 165
P YS A A + + + Y+ + + P P PV A L GH
Sbjct: 376 TPRYSDGASGGNGGRQSAGGWPHAQPGYQKQQGEVYRTLLQTPTTSPAPEPV-APALDGH 434
Query: 164 RGSLRTVRAPEPGHWVTVNAVGHSNACCLPLSQ 66
S V G + G LP+++
Sbjct: 435 SQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAE 467
>sp|Q00662|BGAL_DIACA Putative beta-galactosidase precursor (Lactase) (SR12 protein)
gi|99588|pir||S16595 gene CARSR12 protein - clove pink
gi|18328|emb|CAA40459.1| CARSR12 [Dianthus caryophyllus]
Length = 731
Score = 33.1 bits (74), Expect = 2.9
Identities = 16/48 (33%), Positives = 27/48 (55%)
Frame = -1
Query: 239 YQRVSVCWSARPLPWPVTAQRLPGHRGSLRTVRAPEPGHWVTVNAVGH 96
Y+++++ W W +T L G+ G L+ + EP W+TVN+ GH
Sbjct: 463 YEQINMTWDKSDYLWYMTDVVLDGNEGFLK--KGDEP--WLTVNSAGH 506
>ref|NP_044485.1| proposed start codon is CTG [Human herpesvirus 2]
gi|1869838|emb|CAB06776.1| UL16 [Human herpesvirus 2]
Length = 372
Score = 32.7 bits (73), Expect = 3.8
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 218 WSARPLPWPVTAQRLPGHRGSLRTVRAPEPG 126
W + P P A PGHRG+ RAP+PG
Sbjct: 7 WRPQATPGPPGAAAPPGHRGAPPDARAPDPG 37
>ref|NP_769806.1| gcl [Bradyrhizobium japonicum] gi|27351424|dbj|BAC48431.1| gcl
[Bradyrhizobium japonicum USDA 110]
Length = 596
Score = 32.3 bits (72), Expect = 4.9
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Frame = +3
Query: 24 HVQPHPQHVGRVH----GL*ERQTARIRMTHSVDRDPMAGFWRPDSPQRATMAWQALCRD 191
HV P +GRV G+ A + + +V R+ WR R AW A CRD
Sbjct: 300 HVDIEPTQIGRVFNPDLGIVSDAKAALELFVAVARE-----WRRSGRLRERQAWPAACRD 354
Query: 192 RPR 200
R R
Sbjct: 355 RKR 357
