KCC002000A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002000A_C01 KCC002000A_c01
cgagggtgtgaccaagttcctgaagccctccgtggccggcttcctgctgcagaaggagct
ggactaccttgatggcgccgTGTCCAACCCCAAGCGCCCCTTCGTGGCCATTGTGGGCGG
CTCCAAGGTGTCCTCCAAGATCACCGTCATTGAGGCGCTGATGGAGAAGTGCGACAAGAT
CATCATCGGCGGTGGCATGATCTTCACCTTCTACAAGGCCCGCGGCCTGAAGGTGGGCTC
CTCCCTGGTTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGGC
CAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGTTCGACGCCAA
CGCCAACACCCAGACCGTGCCCATCACCGCCATCCCCGATGGCTGGATGGGTCTGGACAT
TGGCCCGGACTCCGTCAAGACCTTCAACGACGCCCTGGCCGACGCCAAGACCGTTGTGTG
GAACGGCCCCATGGGTGTGTTCGAGTTCCCCAAGTTCGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002000A_C01 KCC002000A_c01
         (519 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P41758|PGKH_CHLRE Phosphoglycerate kinase, chloroplast precur...   335  2e-91
sp|Q9SBN4|PGKH_VOLCA Phosphoglycerate kinase, chloroplast precur...   318  3e-86
gb|AAM51702.1|AF343476_1 3-phosphoglycerate kinase [Triticum tur...   283  7e-76
gb|AAM51700.1|AF343474_1 3-phosphoglycerate kinase [Triticum ura...   283  7e-76
sp|P12782|PGKH_WHEAT Phosphoglycerate kinase, chloroplast precur...   283  7e-76

>sp|P41758|PGKH_CHLRE Phosphoglycerate kinase, chloroplast precursor
           gi|7434543|pir||T08041 phosphoglycerate kinase (EC
           2.7.2.3) precursor, chloroplast - Chlamydomonas
           reinhardtii gi|642454|gb|AAA70082.1| phosphoglycerate
           kinase precursor
          Length = 461

 Score =  335 bits (859), Expect = 2e-91
 Identities = 169/171 (98%), Positives = 170/171 (98%)
 Frame = +2

Query: 2   EGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPFVAIVGGSKVSSKITVIEALMEKCDKI 181
           EGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPFVAIVGGSKVSSKITVIEALMEKCDKI
Sbjct: 221 EGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPFVAIVGGSKVSSKITVIEALMEKCDKI 280

Query: 182 IIGGGMIFTFYKARGLKVGSSLVEDDKIELAKKLEEMAKAKGVQLLLPTDVVVADKFDAN 361
           IIGGGMIFTFYKAR LKVGSSLVEDDKIELAKKLEEMAKAKGVQLLLPTDVVVADKFDAN
Sbjct: 281 IIGGGMIFTFYKARALKVGSSLVEDDKIELAKKLEEMAKAKGVQLLLPTDVVVADKFDAN 340

Query: 362 ANTQTVPITAIPDGWMGLDIGPDSVKTFNDALADAKTVVWNGPMGVFEFPK 514
           ANTQTVPITAIPDGWMGLDIGPDSVKTFNDALADAKTVVWNGPMGVFEFP+
Sbjct: 341 ANTQTVPITAIPDGWMGLDIGPDSVKTFNDALADAKTVVWNGPMGVFEFPQ 391

>sp|Q9SBN4|PGKH_VOLCA Phosphoglycerate kinase, chloroplast precursor
           gi|5902588|gb|AAD55564.1|AF110782_1 phosphoglycerate
           kinase precursor [Volvox carteri f. nagariensis]
          Length = 462

 Score =  318 bits (815), Expect = 3e-86
 Identities = 159/172 (92%), Positives = 165/172 (95%)
 Frame = +2

Query: 2   EGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPFVAIVGGSKVSSKITVIEALMEKCDKI 181
           EGVTKFLKPSVAGFLLQKELDYLDGAVS PKRPFVAIVGGSKVSSKITVIE LMEKCDKI
Sbjct: 222 EGVTKFLKPSVAGFLLQKELDYLDGAVSAPKRPFVAIVGGSKVSSKITVIEKLMEKCDKI 281

Query: 182 IIGGGMIFTFYKARGLKVGSSLVEDDKIELAKKLEEMAKAKGVQLLLPTDVVVADKFDAN 361
           IIGGGMIFTFYKARGLKVGSSLVE+DK+ELAK LE +AKAKGVQLLLP+DVVVADKFDAN
Sbjct: 282 IIGGGMIFTFYKARGLKVGSSLVEEDKLELAKNLEAIAKAKGVQLLLPSDVVVADKFDAN 341

Query: 362 ANTQTVPITAIPDGWMGLDIGPDSVKTFNDALADAKTVVWNGPMGVFEFPKF 517
           ANTQTV + AIPDGWMGLDIGPDS+KTF DALADAKTVVWNGPMGVFEFPKF
Sbjct: 342 ANTQTVSVEAIPDGWMGLDIGPDSIKTFQDALADAKTVVWNGPMGVFEFPKF 393

>gb|AAM51702.1|AF343476_1 3-phosphoglycerate kinase [Triticum turgidum subsp. dicoccoides]
           gi|21396655|gb|AAM51706.1|AF343480_1 3-phosphoglycerate
           kinase [Triticum aestivum]
           gi|21396675|gb|AAM51716.1|AF343490_1 3-phosphoglycerate
           kinase [Aegilops speltoides subsp. ligustica]
          Length = 298

 Score =  283 bits (725), Expect = 7e-76
 Identities = 138/172 (80%), Positives = 155/172 (89%)
 Frame = +2

Query: 2   EGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPFVAIVGGSKVSSKITVIEALMEKCDKI 181
           EGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPF AIVGGSKVSSKI VIE+L+EKCD +
Sbjct: 87  EGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDIL 146

Query: 182 IIGGGMIFTFYKARGLKVGSSLVEDDKIELAKKLEEMAKAKGVQLLLPTDVVVADKFDAN 361
           ++GGGMIFTFYKA+GL VGSSLVE+DK+ELA  L   AKAKGV LLLP+DV++ADKF  +
Sbjct: 147 LLGGGMIFTFYKAQGLSVGSSLVEEDKLELATSLLAKAKAKGVSLLLPSDVIIADKFAPD 206

Query: 362 ANTQTVPITAIPDGWMGLDIGPDSVKTFNDALADAKTVVWNGPMGVFEFPKF 517
           AN+QTVP +AIPDGWMGLDIGPDSVKTFNDAL   +T++WNGPMGVFEF KF
Sbjct: 207 ANSQTVPASAIPDGWMGLDIGPDSVKTFNDALDTTQTIIWNGPMGVFEFDKF 258

>gb|AAM51700.1|AF343474_1 3-phosphoglycerate kinase [Triticum urartu]
           gi|21396645|gb|AAM51701.1|AF343475_1 3-phosphoglycerate
           kinase [Triticum aestivum]
           gi|21396649|gb|AAM51703.1|AF343477_1 3-phosphoglycerate
           kinase [Triticum timopheevii subsp. armeniacum]
           gi|21396651|gb|AAM51704.1|AF343478_1 3-phosphoglycerate
           kinase [Triticum aestivum]
           gi|21396653|gb|AAM51705.1|AF343479_1 3-phosphoglycerate
           kinase [Aegilops tauschii subsp. tauschii]
           gi|21396657|gb|AAM51707.1|AF343481_1 3-phosphoglycerate
           kinase [Triticum turgidum subsp. dicoccoides]
           gi|21396665|gb|AAM51711.1|AF343485_1 3-phosphoglycerate
           kinase [Aegilops bicornis]
           gi|21396667|gb|AAM51712.1|AF343486_1 3-phosphoglycerate
           kinase [Aegilops sharonensis]
           gi|21396669|gb|AAM51713.1|AF343487_1 3-phosphoglycerate
           kinase [Aegilops longissima]
           gi|21396671|gb|AAM51714.1|AF343488_1 3-phosphoglycerate
           kinase [Triticum timopheevii subsp. armeniacum]
           gi|21396673|gb|AAM51715.1|AF343489_1 3-phosphoglycerate
           kinase [Aegilops searsii]
           gi|21396679|gb|AAM51718.1|AF343492_1 3-phosphoglycerate
           kinase [Aegilops speltoides subsp. speltoides]
          Length = 298

 Score =  283 bits (725), Expect = 7e-76
 Identities = 138/172 (80%), Positives = 155/172 (89%)
 Frame = +2

Query: 2   EGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPFVAIVGGSKVSSKITVIEALMEKCDKI 181
           EGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPF AIVGGSKVSSKI VIE+L+EKCD +
Sbjct: 87  EGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDIL 146

Query: 182 IIGGGMIFTFYKARGLKVGSSLVEDDKIELAKKLEEMAKAKGVQLLLPTDVVVADKFDAN 361
           ++GGGMIFTFYKA+GL VGSSLVE+DK+ELA  L   AKAKGV LLLP+DV++ADKF  +
Sbjct: 147 LLGGGMIFTFYKAQGLSVGSSLVEEDKLELATSLLAKAKAKGVSLLLPSDVIIADKFAPD 206

Query: 362 ANTQTVPITAIPDGWMGLDIGPDSVKTFNDALADAKTVVWNGPMGVFEFPKF 517
           AN+QTVP +AIPDGWMGLDIGPDSVKTFNDAL   +T++WNGPMGVFEF KF
Sbjct: 207 ANSQTVPASAIPDGWMGLDIGPDSVKTFNDALDTTQTIIWNGPMGVFEFDKF 258

>sp|P12782|PGKH_WHEAT Phosphoglycerate kinase, chloroplast precursor gi|66912|pir||TVWTGC
           phosphoglycerate kinase (EC 2.7.2.3) precursor,
           chloroplast - wheat gi|21833|emb|CAA33303.1| unnamed
           protein product [Triticum aestivum]
           gi|3293043|emb|CAA51931.1| phosphoglycerate kinase
           [Triticum aestivum]
          Length = 480

 Score =  283 bits (725), Expect = 7e-76
 Identities = 138/172 (80%), Positives = 155/172 (89%)
 Frame = +2

Query: 2   EGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPFVAIVGGSKVSSKITVIEALMEKCDKI 181
           EGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPF AIVGGSKVSSKI VIE+L+EKCD +
Sbjct: 232 EGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDIL 291

Query: 182 IIGGGMIFTFYKARGLKVGSSLVEDDKIELAKKLEEMAKAKGVQLLLPTDVVVADKFDAN 361
           ++GGGMIFTFYKA+GL VGSSLVE+DK+ELA  L   AKAKGV LLLP+DV++ADKF  +
Sbjct: 292 LLGGGMIFTFYKAQGLSVGSSLVEEDKLELATSLLAKAKAKGVSLLLPSDVIIADKFAPD 351

Query: 362 ANTQTVPITAIPDGWMGLDIGPDSVKTFNDALADAKTVVWNGPMGVFEFPKF 517
           AN+QTVP +AIPDGWMGLDIGPDSVKTFNDAL   +T++WNGPMGVFEF KF
Sbjct: 352 ANSQTVPASAIPDGWMGLDIGPDSVKTFNDALDTTQTIIWNGPMGVFEFDKF 403



EST assemble image


clone accession position
1 HC044f08_r AV635306 1 479
2 MX046c01_r BP087903 164 520




Chlamydomonas reinhardtii
Kazusa DNA Research Institute