KCC001992A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001992A_C01 KCC001992A_c01
CCAGGATCCAGACTGCGCCTAGTGGGGAGTGGTCGTCTTCACCTTATTTAGGAAGAGCCA
AAGACACGAGCACGCAGGACAAAGGCGGGAGCGCGCAAGTGCTGGCCTGGTCGTGGACGC
CGGCGTGTTTGACACGGACACGGGGAACTGGGTGTTTGACTGGCTGGGTGACGGTTGGTG
GGCGAGGGGAGATGTGTGGGGTGCCAAGCTGGGGAGTGCATAGGTGAGGCGGCATTGGGC
AGTGGAATGCGACGGGGCACAAGGGGGCGCGCGGCGGGATGGGTTTTGCGACACGCCCCT
GGCGATGTGCGGCAGGAGGGAGGCGGGGTCGGGGGCAGCGGGATGAACAGGAAGAAATCG
GGCGAAGCAAATGTTGGGGCTCTGCTGTCGGGCCTCCGTAGCTGAAACTTGAAAGCGCTA
CTAGATGCGTTGACTCCGTTGATTGCTGGCGTTGCTCCAATTGTTGAATACATATATAAC
GAAGTAGTAGTAAAGTGCGATGCTGTGCCGGCTACCCGGATTGCAAACCTAAAGCTACAT
CGCTGCAGCCTAATCACTTTGGGCTCTTAGTCATGCCATCTGGTCATTAATGATGCGACA
TGGGCGTACGCCTGCCCGTGCGCCTGGTGCTGCAAGGGTGGTTTAAAGCATGGCTTGCGC
CGGCTGCGTGCTAATTAGGGGCAGACACGATTGCGAGCCTGGACTGTTGTGTGTGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001992A_C01 KCC001992A_c01
         (716 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_173940.1| protein kinase family [Arabidopsis thaliana] gi...    54  2e-06
gb|AAB70928.1| proline rich protein [Santalum album]                   53  4e-06
ref|ZP_00089904.1| COG1674: DNA segregation ATPase FtsK/SpoIIIE ...    52  1e-05
prf||1814452B Hyp-rich glycoprotein                                    49  8e-05
pir||JQ0985 hydroxyproline-rich glycoprotein precursor - maize g...    49  8e-05

>ref|NP_173940.1| protein kinase family [Arabidopsis thaliana]
           gi|25403034|pir||F86387 probable Pto kinase interactor
           [imported] - Arabidopsis thaliana
           gi|12321185|gb|AAG50687.1|AC079829_20 Pto kinase
           interactor, putative [Arabidopsis thaliana]
          Length = 760

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 36/105 (34%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
 Frame = -1

Query: 392 PDSRAPTFASPDFFLFIPLPPTPPPSCRTSPGACRKTHPAARPLVPRRIPLPNAASPMHS 213
           P    PT A P   +  P PPT PP    SP +     P + PL P ++  P+ + P H 
Sbjct: 124 PPPPPPTEAPPTTPITSPSPPTNPPPPPESPPSLPAPDPPSNPLPPPKLVPPSHSPPRHL 183

Query: 212 PA-------WHPTHLPSPTNRHPASQTPSSPCPCQTRRRPRPGQH 99
           P+         P HLPSP    PAS+ PS+P        P P  H
Sbjct: 184 PSPPASEIPPPPRHLPSP----PASERPSTPPSDSEHPSPPPPGH 224

 Score = 33.9 bits (76), Expect = 2.6
 Identities = 38/130 (29%), Positives = 49/130 (37%), Gaps = 8/130 (6%)
 Frame = -1

Query: 449 PAINGVNASSSAFKFQLRRPDSRAPTFAS----PDFFLFIPLP-PTPP-PSCRTSPGACR 288
           P+  G NA+S   +     P     T A     P+  L  P P P+PP PS    P    
Sbjct: 31  PSFPGDNATSPTREPTNGNPPETTNTPAQSSPPPETPLSSPPPEPSPPSPSLTGPPPTTI 90

Query: 287 KTHPAARPLVPRRIPL--PNAASPMHSPAWHPTHLPSPTNRHPASQTPSSPCPCQTRRRP 114
              P   P  P  +P   P  A+P+ SP    +  P P    P +   +SP P  T   P
Sbjct: 91  PVSPPPEPSPPPPLPTEAPPPANPVSSPPPESSPPPPPPTEAPPTTPITSPSP-PTNPPP 149

Query: 113 RPGQHLRAPA 84
            P      PA
Sbjct: 150 PPESPPSLPA 159

>gb|AAB70928.1| proline rich protein [Santalum album]
          Length = 326

 Score = 53.1 bits (126), Expect = 4e-06
 Identities = 38/130 (29%), Positives = 51/130 (39%), Gaps = 14/130 (10%)
 Frame = -1

Query: 431 NASSSAFKFQLRRPDSRAPTFASPDFFLFIPLPPTP---PPSCRTSPGACRKTHPAARPL 261
           N +S A     RR D   P F  P        PPTP   PP+ R SP       P+  P 
Sbjct: 95  NPNSPASLIPWRRWDHTPPLFNPPSD------PPTPYGTPPTVRRSPSPPESASPSPSPG 148

Query: 260 VPRRIPLPNAASPMHSPAWH-----------PTHLPSPTNRHPASQTPSSPCPCQTRRRP 114
            P   P P  +SP  +P              P+  P P +  P+ ++PS P     R RP
Sbjct: 149 PPAATPTPRPSSPTSTPPTDGETPRPPGPRSPSPSPGPPSCSPSPKSPSPPASSPPRSRP 208

Query: 113 RPGQHLRAPA 84
            P  +  +P+
Sbjct: 209 GPPDYTTSPS 218

 Score = 36.6 bits (83), Expect = 0.40
 Identities = 28/79 (35%), Positives = 34/79 (42%), Gaps = 12/79 (15%)
 Frame = -1

Query: 341 PLPPTP---PPSCRTSPGACRKTHPAARPLVPRRIPLPNAASPM---------HSPAWHP 198
           P  PTP   PPS   SP     T P++RP  P R P+    SP           SP   P
Sbjct: 252 PTSPTPTPRPPSYSPSP-----TPPSSRPSPPLRSPILTPPSPAAVPPIGRSPPSPIDPP 306

Query: 197 THLPSPTNRHPASQTPSSP 141
              P P++   +  TPSSP
Sbjct: 307 CSSPEPSSPPTSPPTPSSP 325

 Score = 36.6 bits (83), Expect = 0.40
 Identities = 32/95 (33%), Positives = 39/95 (40%), Gaps = 3/95 (3%)
 Frame = -1

Query: 362 PDFFLFIPLPPTP---PPSCRTSPGACRKTHPAARPLVPRRIPLPNAASPMHSPAWHPTH 192
           P  +   P PPTP   PP+   SP       P A+P  P R      +SP  SP   PT 
Sbjct: 210 PPDYTTSPSPPTPRSVPPTPPASPSP-----PTAKPSPPSR-----GSSP--SPPTSPTP 257

Query: 191 LPSPTNRHPASQTPSSPCPCQTRRRPRPGQHLRAP 87
            P P +  P+   PSS          RP   LR+P
Sbjct: 258 TPRPPSYSPSPTPPSS----------RPSPPLRSP 282

 Score = 34.7 bits (78), Expect = 1.5
 Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
 Frame = -1

Query: 341 PLPPTPPPSCRTSPGACRKTHPAARPLVPRRIPLPNAASPMHSPAWHPTHLPSPTNRHPA 162
           P P   PPSC  SP                + P P A+SP  S    P +  SP+   P 
Sbjct: 180 PSPSPGPPSCSPSP----------------KSPSPPASSPPRSRPGPPDYTTSPSPPTPR 223

Query: 161 SQTPSSPC-PCQTRRRPRPGQHLRAPA 84
           S  P+ P  P     +P P     +P+
Sbjct: 224 SVPPTPPASPSPPTAKPSPPSRGSSPS 250

 Score = 33.5 bits (75), Expect = 3.4
 Identities = 32/96 (33%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
 Frame = -2

Query: 361 PISSCSSRCPRPR-LPPAAHRQGRVAKPIPPRA-PLCPVAFHCPMPPHLCTPQLGTPHIS 188
           P  + S   P PR +PP        A P PP A P  P     P PP   TP    P  S
Sbjct: 211 PDYTTSPSPPTPRSVPPTPP-----ASPSPPTAKPSPPSRGSSPSPPTSPTPTPRPPSYS 265

Query: 187 PRPPTVTQPVKHPVPRVRVKHAGVHDQASTCALPPL 80
           P P   T P   P P +R   + +    S  A+PP+
Sbjct: 266 PSP---TPPSSRPSPPLR---SPILTPPSPAAVPPI 295

>ref|ZP_00089904.1| COG1674: DNA segregation ATPase FtsK/SpoIIIE and related proteins
           [Azotobacter vinelandii]
          Length = 1336

 Score = 51.6 bits (122), Expect = 1e-05
 Identities = 42/110 (38%), Positives = 55/110 (49%), Gaps = 5/110 (4%)
 Frame = -1

Query: 398 RRPDSRAPTFASPDFFLFIPLPPTPPPSCRTSPGACRKTHPAARPLVPRRIPL----PNA 231
           RRP +RA T +           P+PPP+ R SPGA R+T  ++ P  P R  +    P+A
Sbjct: 187 RRPPARARTGSRS---------PSPPPAGR-SPGAWRRTARSSPPPRPCRASVGLRCPSA 236

Query: 230 ASPMHS-PAWHPTHLPSPTNRHPASQTPSSPCPCQTRRRPRPGQHLRAPA 84
           A P  + P+  P  LP P  R PAS  P  P    T RRP  G+  +A A
Sbjct: 237 AGPDRARPSDSPPPLPGPVARTPASAPPGPPA---TTRRPPAGRAPKATA 283

>prf||1814452B Hyp-rich glycoprotein
          Length = 327

 Score = 48.9 bits (115), Expect = 8e-05
 Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
 Frame = -1

Query: 392 PDSRAPT-FASPDFFLFIPLPPTPPPSCRT-SPGACRKTHPAARPLVPRRIPLPNAASPM 219
           P  + PT   +P  +   P PPTP P+  T +P     THP  +P  P   P P   +P 
Sbjct: 199 PSPKPPTPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPTHPTPKPTPPTYTPSPKPPTPK 258

Query: 218 HSPAWHPTHLPSPTNRHPASQTPS-SPCPCQTRRRPRPGQHLRAP 87
            +P   PT+ PSP    P    P+ +P P     +P P  +   P
Sbjct: 259 PTP---PTYTPSPKPPTPKPTPPTYTPSPKPPTPKPTPPTYTPTP 300

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 8/110 (7%)
 Frame = -1

Query: 392 PDSRAPT-FASPDFFLFIPLPPTP---PPSCRTSPGACRKTHPAARPLVPRRIPLPNAAS 225
           P  + PT   +P  +   P PPTP   PP+   SP       P  +P  P   P P   +
Sbjct: 146 PSPKPPTPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPATKPPTPKPTPPTYTPSPKPPT 205

Query: 224 PMHSPAWHPTHLPSP----TNRHPASQTPSSPCPCQTRRRPRPGQHLRAP 87
           P  +P   PT+ PSP        P + TPS   P     +P P  +  +P
Sbjct: 206 PKPTP---PTYTPSPKPPTPKPTPPTYTPSPKPPTHPTPKPTPPTYTPSP 252

 Score = 39.7 bits (91), Expect = 0.047
 Identities = 29/104 (27%), Positives = 41/104 (38%), Gaps = 1/104 (0%)
 Frame = -1

Query: 395 RPDSRAPTFASPDFFLFIPLPPTPPPSCRTSPGACRKTHPAARPLVPRRIPLPNAASPMH 216
           +P +  PT   P  +   P PPTP P+  T   + +   P   P      P P A  P  
Sbjct: 133 KPPTPKPT---PPTYTPSPKPPTPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPATKPPT 189

Query: 215 SPAWHPTHLPSPTNRHPASQTPS-SPCPCQTRRRPRPGQHLRAP 87
                PT+ PSP    P    P+ +P P     +P P  +  +P
Sbjct: 190 PKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPTPKPTPPTYTPSP 233

 Score = 39.7 bits (91), Expect = 0.047
 Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
 Frame = -1

Query: 365 SPDFFLFIPLPPTP---PPSCRTSPGACRKTHPAARPLVPRRIPLPNAASPMHSPAWHPT 195
           +P  +   P PPTP   PP+   SP       P  +P  P   P P   +P  +P   PT
Sbjct: 124 TPPTYTPTPKPPTPKPTPPTYTPSP-----KPPTPKPTPPTYTPSPKPPTPKPTP---PT 175

Query: 194 HLPSPTNRHPASQTPSSPCPCQTRRRPRP 108
           + PSP    P +  P +P P      P P
Sbjct: 176 YTPSP---KPPATKPPTPKPTPPTYTPSP 201

 Score = 39.7 bits (91), Expect = 0.047
 Identities = 32/103 (31%), Positives = 41/103 (39%), Gaps = 17/103 (16%)
 Frame = -1

Query: 392 PDSRAPTFASPD----FFLFIPLPPTP---PPSCRTSPGACRKTHPAARPLVPRRIPLPN 234
           P  + PT  +P      +   P PPTP   PP+   SP       P  +P  P   P P 
Sbjct: 231 PSPKPPTHPTPKPTPPTYTPSPKPPTPKPTPPTYTPSPKP-----PTPKPTPPTYTPSPK 285

Query: 233 AASPMHSPAWHPTHLPSP----------TNRHPASQTPSSPCP 135
             +P  +P   PT+ P+P          T   P S TPS P P
Sbjct: 286 PPTPKPTP---PTYTPTPKPPATKPPTYTPTPPVSHTPSPPPP 325

 Score = 37.4 bits (85), Expect = 0.23
 Identities = 23/86 (26%), Positives = 33/86 (37%), Gaps = 1/86 (1%)
 Frame = -1

Query: 341 PLPPTPPPSCRTSPGACRKTHPAARPLVPRRIPLPNAASPMHSPAWHPTHLPSPTNRHPA 162
           P PPT  PS + +P     T    +P  P   P P            PT+ P+P    P 
Sbjct: 79  PTPPTYTPSPKPTPPTYTPTPTPPKPTPPTYTPAPTPKPTPKPTPTPPTYTPTPKPPTPK 138

Query: 161 SQTPS-SPCPCQTRRRPRPGQHLRAP 87
              P+ +P P     +P P  +  +P
Sbjct: 139 PTPPTYTPSPKPPTPKPTPPTYTPSP 164

 Score = 37.4 bits (85), Expect = 0.23
 Identities = 24/84 (28%), Positives = 32/84 (37%), Gaps = 6/84 (7%)
 Frame = -1

Query: 341 PLPPTPPPSCRTSPGACRKTHPAARPLVPRRIPLPNAASPMHSPA------WHPTHLPSP 180
           P P  PP      P    K H   +P  P   P P    P ++P         PT+ P+P
Sbjct: 57  PKPDKPPKEHGPKPEKPPKEH---KPTPPTYTPSPKPTPPTYTPTPTPPKPTPPTYTPAP 113

Query: 179 TNRHPASQTPSSPCPCQTRRRPRP 108
           T +     TP+ P    T + P P
Sbjct: 114 TPKPTPKPTPTPPTYTPTPKPPTP 137

>pir||JQ0985 hydroxyproline-rich glycoprotein precursor - maize
           gi|257041|gb|AAB23539.1| hydroxyproline-rich
           glycoprotein; HRGP [Zea mays] gi|4007865|emb|CAA10387.1|
           Hydroxyproline-rich Glycoprotein (HRGP) [Zea mays]
          Length = 328

 Score = 48.9 bits (115), Expect = 8e-05
 Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
 Frame = -1

Query: 392 PDSRAPT-FASPDFFLFIPLPPTPPPSCRT-SPGACRKTHPAARPLVPRRIPLPNAASPM 219
           P  + PT   +P  +   P PPTP P+  T +P     THP  +P  P   P P   +P 
Sbjct: 200 PSPKPPTPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPTHPTPKPTPPTYTPSPKPPTPK 259

Query: 218 HSPAWHPTHLPSPTNRHPASQTPS-SPCPCQTRRRPRPGQHLRAP 87
            +P   PT+ PSP    P    P+ +P P     +P P  +   P
Sbjct: 260 PTP---PTYTPSPKPPTPKPTPPTYTPSPKPPTPKPTPPTYTPTP 301

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 8/110 (7%)
 Frame = -1

Query: 392 PDSRAPT-FASPDFFLFIPLPPTP---PPSCRTSPGACRKTHPAARPLVPRRIPLPNAAS 225
           P  + PT   +P  +   P PPTP   PP+   SP       P  +P  P   P P   +
Sbjct: 147 PSPKPPTPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPATKPPTPKPTPPTYTPSPKPPT 206

Query: 224 PMHSPAWHPTHLPSP----TNRHPASQTPSSPCPCQTRRRPRPGQHLRAP 87
           P  +P   PT+ PSP        P + TPS   P     +P P  +  +P
Sbjct: 207 PKPTP---PTYTPSPKPPTPKPTPPTYTPSPKPPTHPTPKPTPPTYTPSP 253

 Score = 42.7 bits (99), Expect = 0.006
 Identities = 27/94 (28%), Positives = 37/94 (38%), Gaps = 1/94 (1%)
 Frame = -1

Query: 365 SPDFFLFIPLPPTPPPSCRTSPGACRKTHPAARPLVPRRIPLPNAASPMHSPAWHPTHLP 186
           +P  +   P PP P P   T      K  P   P  P   P P   +P  +P   PT+ P
Sbjct: 91  TPPTYTPTPTPPKPTPPTYTPAPTPHKPTPKPTPTPPTYTPTPKPPTPKPTP---PTYTP 147

Query: 185 SPTNRHPASQTPS-SPCPCQTRRRPRPGQHLRAP 87
           SP    P    P+ +P P     +P P  +  +P
Sbjct: 148 SPKPPTPKPTPPTYTPSPKPPTPKPTPPTYTPSP 181

 Score = 39.7 bits (91), Expect = 0.047
 Identities = 32/103 (31%), Positives = 41/103 (39%), Gaps = 17/103 (16%)
 Frame = -1

Query: 392 PDSRAPTFASPD----FFLFIPLPPTP---PPSCRTSPGACRKTHPAARPLVPRRIPLPN 234
           P  + PT  +P      +   P PPTP   PP+   SP       P  +P  P   P P 
Sbjct: 232 PSPKPPTHPTPKPTPPTYTPSPKPPTPKPTPPTYTPSPKP-----PTPKPTPPTYTPSPK 286

Query: 233 AASPMHSPAWHPTHLPSP----------TNRHPASQTPSSPCP 135
             +P  +P   PT+ P+P          T   P S TPS P P
Sbjct: 287 PPTPKPTP---PTYTPTPKPPATKPPTYTPTPPVSHTPSPPPP 326

 Score = 39.7 bits (91), Expect = 0.047
 Identities = 25/87 (28%), Positives = 35/87 (39%), Gaps = 2/87 (2%)
 Frame = -1

Query: 341 PLPPTPPPSCRTSPGACRKTHPAARPLVPRRIPLPNAASPMHSPA-WHPTHLPSPTNRHP 165
           P PPT  PS + +P     T    +P  P   P P    P   P    PT+ P+P    P
Sbjct: 79  PTPPTYTPSPKPTPPTYTPTPTPPKPTPPTYTPAPTPHKPTPKPTPTPPTYTPTPKPPTP 138

Query: 164 ASQTPS-SPCPCQTRRRPRPGQHLRAP 87
               P+ +P P     +P P  +  +P
Sbjct: 139 KPTPPTYTPSPKPPTPKPTPPTYTPSP 165

 Score = 39.7 bits (91), Expect = 0.047
 Identities = 29/104 (27%), Positives = 41/104 (38%), Gaps = 1/104 (0%)
 Frame = -1

Query: 395 RPDSRAPTFASPDFFLFIPLPPTPPPSCRTSPGACRKTHPAARPLVPRRIPLPNAASPMH 216
           +P +  PT   P  +   P PPTP P+  T   + +   P   P      P P A  P  
Sbjct: 134 KPPTPKPT---PPTYTPSPKPPTPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPATKPPT 190

Query: 215 SPAWHPTHLPSPTNRHPASQTPS-SPCPCQTRRRPRPGQHLRAP 87
                PT+ PSP    P    P+ +P P     +P P  +  +P
Sbjct: 191 PKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPTPKPTPPTYTPSP 234

 Score = 36.2 bits (82), Expect = 0.52
 Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
 Frame = -1

Query: 341 PLPPTPPPSCRTSPGACRKTHPAARPLVPRRIPLPNAASPMHSPA------WHPTHLPSP 180
           P P  PP      P    K H   +P  P   P P    P ++P         PT+ P+P
Sbjct: 57  PKPDKPPKEHGPKPEKPPKEH---KPTPPTYTPSPKPTPPTYTPTPTPPKPTPPTYTPAP 113

Query: 179 TNRHPASQ-TPSSPCPCQTRRRPRP 108
           T   P  + TP+ P    T + P P
Sbjct: 114 TPHKPTPKPTPTPPTYTPTPKPPTP 138

 Score = 33.9 bits (76), Expect = 2.6
 Identities = 26/90 (28%), Positives = 29/90 (31%), Gaps = 6/90 (6%)
 Frame = -2

Query: 391 PTAEPQHLLRPISSCSSRCPRPRLPPAAHRQGRVAKPIPPRAPLCPVAFHCPMP------ 230
           PT  P     P +   +  P    PP         KP P   P  P     P P      
Sbjct: 82  PTYTPSPKPTPPTYTPTPTPPKPTPPTYTPAPTPHKPTPKPTPTPPTYTPTPKPPTPKPT 141

Query: 229 PHLCTPQLGTPHISPRPPTVTQPVKHPVPR 140
           P   TP    P   P PPT T   K P P+
Sbjct: 142 PPTYTPSPKPPTPKPTPPTYTPSPKPPTPK 171



EST assemble image


clone accession position
1 HC042a07_r AV635114 1 559
2 MXL032g09_r BP094934 321 819




Chlamydomonas reinhardtii
Kazusa DNA Research Institute